CSPI01G25630 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G25630
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	DNA binding protein, putative
Location	Chr1 : 21060654 .. 21062021 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAACAGTGAGTTGATTGCAAATTTGCAAACCCTAATTTTAATTTCTCTGCAACTTTCCCCCTCCTTCAACTTTTGAAACCCAAAGCAAAACTCAAACGAAACCCTATCAATACCTTCTTCTATTCAGTATTCCCTTCTGGGATTGTTTCATTCTTCCATTCTTTTCATCTTCAATTCTTTACCTTGTTTACGGTTTTTTTTTTCTTCTTTCTATTACGTCTCTCAATGAACCACCCTCCTCTTCCTCCTCCCCCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAGCCCCTTTTCATGATACAGAGCCAAGAATTGATCAAATCATGGTTTCCTTGGTCTTTTGCTAAATGATATTGTTCTAAAGTATGAAAATTCATTGAGCTACTTTCGTACTGGGTTTGACTTGGCTCTTTAGGAATTCATGTAGTGAGGATAGCACAATTGCCTGTG

mRNA sequence

ATGAACCACCCTCCTCTTCCTCCTCCCCCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG

Coding sequence (CDS)

ATGAACCACCCTCCTCTTCCTCCTCCCCCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG

Homology

[Close]

BLAST of CSPI01G25630 vs. TrEMBL
Match: A0A0A0LYS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 6.6e-175
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 1


Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQS-NNIGLLNE 300
           STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQS NNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]

BLAST of CSPI01G25630 vs. TrEMBL
Match: A0A067JHK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 1


Query: 22  ECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
           +C +C S+  W+LHHVR+RGI RRLCT CVLRLHP+SFCP CF FYD +  P PS R +C
Sbjct: 25  DCSHCRSKETWLLHHVRLRGIYRRLCTCCVLRLHPASFCPLCFTFYD-TTPPPPSKRLSC 84

Query: 82  SKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRK 141
           S CSS THSHC            S + S ++LCPPCA PNFSFF  D   + + ++ID+K
Sbjct: 85  SNCSSFTHSHCAP----------SQSPSFAFLCPPCADPNFSFFHLD---KTNNRTIDKK 144

Query: 142 TAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRK 201
            A VLLCAAKIA+ SMAKAV+VARA+AER+VREAA+ RKRAREALE+V  V     A+RK
Sbjct: 145 MATVLLCAAKIAACSMAKAVVVARAEAERRVREAAVCRKRAREALENVALV-----AKRK 204

Query: 202 EEASVEVSGSGNLGVKEKE 221
           E  SVEVSGSGNLG +E++
Sbjct: 205 EVESVEVSGSGNLGKRERD 204

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BLAST of CSPI01G25630 vs. TrEMBL
Match: B9RFQ8_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.5e-49
Identity = 123/226 (54.42%), Postives = 153/226 (67.70%), Query Frame = 1


Query: 10  PSTPNPP-TKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYD 69
           P TPN   T  +  CGNC S+  ++LHHVR+RG++RRLCTSCVLR HPSSFCP CF FYD
Sbjct: 4   PITPNKSNTSTIGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYD 63

Query: 70  LSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSD 129
            S  P PS R +CS C+S THSHC            +S+    +LCPPCA  NF+FF+ +
Sbjct: 64  TSPPP-PSKRISCSNCTSFTHSHCA-----------TSSPPFPFLCPPCADANFNFFNFE 123

Query: 130 SKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 189
           +   I+ K+ID+  A VLLCAAKIA+ SMAKAV VAR +AER+VREAA+ RKRAREALEH
Sbjct: 124 N---INKKTIDKDMATVLLCAAKIAANSMAKAVNVARTEAERRVREAAVCRKRAREALEH 183

Query: 190 VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENA 235
           V F+     A+RK+  SV+VS S +LG K    N T+G    A +A
Sbjct: 184 VLFL-----AKRKDADSVQVSASAHLG-KRVINNITIGSPQNANSA 208

[Close]

BLAST of CSPI01G25630 vs. TrEMBL
Match: A0A061F375_THECC (DNA binding protein, putative OS=Theobroma cacao GN=TCM_026837 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.8e-45
Identity = 109/199 (54.77%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 21  KECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFT 80
           KEC NCG+     LH VR+ GI RRLCTSCVLRLHPSSFCP+CF FY  ++ PHPS R  
Sbjct: 31  KECSNCGAHVPHFLHQVRLLGIQRRLCTSCVLRLHPSSFCPACFAFYGGTL-PHPSKRIA 90

Query: 81  CSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDR 140
           CS CSS THSHC                 SSYLCPPC   +FSFF       +    ID+
Sbjct: 91  CSNCSSFTHSHCA-----------GDNLLSSYLCPPCKDSSFSFFP------LKDNKIDK 150

Query: 141 KTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARR 200
           K A+ LLCAAKIAS+SM KAV VA A+A+RKVREAA+ARKRAREALEH+ ++   ERAR+
Sbjct: 151 KLALALLCAAKIASSSMGKAVTVAWAEADRKVREAALARKRAREALEHLLYITREERARK 210

Query: 201 K-EEASVEVSGSGNLGVKE 219
           + +  SV++S +    V++
Sbjct: 211 ENDNVSVDLSDANLAKVED 211

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BLAST of CSPI01G25630 vs. TrEMBL
Match: A0A067DPC4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025319mg PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.2e-44
Identity = 108/199 (54.27%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MNHPP---LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPS 60
           MNH P    P PP  P  PT    +CGNCG+     L +VR+RGI+RRLCT CVL+LHPS
Sbjct: 1   MNHQPPSTTPRPPLPPPSPTTTTGDCGNCGAHVATFLFNVRLRGIHRRLCTKCVLKLHPS 60

Query: 61  SFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPC 120
           SFCP CF FYD S  PHPS R  CS+CSS THSHC  +P  P            YLC  C
Sbjct: 61  SFCPVCFAFYD-SNPPHPSKRQACSQCSSFTHSHCATSPPSP------------YLCRLC 120

Query: 121 AKPNFSFFD-SDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAA 180
           +  ++S     +  P  SPK ID K+A ++LCAAKIAS+SMAKAV VAR +AE+KVR+AA
Sbjct: 121 SPSSYSSITLMNDMPSSSPKRIDDKSAAMVLCAAKIASSSMAKAVTVARNEAEKKVRDAA 180

Query: 181 MARKRAREALEHVGFVVAR 196
           +ARK+AREALE VG ++ +
Sbjct: 181 LARKKAREALERVGVLITK 186

[Close]

BLAST of CSPI01G25630 vs. TAIR10
Match: AT1G09520.1 (AT1G09520.1 LOCATED IN: chloroplast)

HSP 1 Score: 135.6 bits (340), Expect = 5.6e-32
Identity = 97/269 (36.06%), Postives = 136/269 (50.56%), Query Frame = 1


Query: 11  STPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLS 70
           +T +      + C +CGS   W++H VR+R   R  CT C+LR HP+SFCP CF  YD  
Sbjct: 14  ATSDAAANSTERCDDCGSSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD-- 73

Query: 71  VSPHPSNRFTCS--KCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPN-FSFFDS 130
            SP    R +CS   C S+TH HC               +  SYLCPPC  PN FSFF  
Sbjct: 74  SSPPSFRRVSCSIKGCHSLTHIHCA-----------GDESHLSYLCPPCRDPNSFSFF-- 133

Query: 131 DSKPRI---SPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRARE 190
             +P +     + +D+  +   LCAAKIA++SM KAV+ A+ + +R+ +EAA+A+KRARE
Sbjct: 134 --RPIVDENGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRARE 193

Query: 191 ALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLN 250
           ALE V  + A+E+AR       E        +       T+  T  ++        +T N
Sbjct: 194 ALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASNGATVKETESSDTTTTPTTTTTKN 253

Query: 251 TGSALTQRRESLNGFVRQMSMVKNEAAAS 274
            G    Q   +      Q++ VK EA AS
Sbjct: 254 NGGTEKQNPAT------QLAKVKQEADAS 259

[Close]

BLAST of CSPI01G25630 vs. TAIR10
Match: AT3G17460.1 (AT3G17460.1 PHD finger family protein)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-18
Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 1


Query: 16  PTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHP 75
           P +  +EC  C  +    +H V   G  RRLCT C+L+ +   FC  CF  +D +V P  
Sbjct: 3   PEQKQRECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA 62

Query: 76  SNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS-----SSYLCPPCAKPNFSFFDSDSK 135
             R  C  C S TH  C   P  P     SS++S     SS+ C PC+ PNF+FF     
Sbjct: 63  --RIICVNCPSSTHLSCSTQP--PSSSAASSSSSAPPPASSFTCQPCSNPNFTFFPKSRV 122

Query: 136 PRISPKS--IDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 195
               P    +  K+A+ L+ A  I+ A+M KAV + + +A +K+  A  A+ RA+ AL +
Sbjct: 123 NEDVPDETPLTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTN 182

Query: 196 VGFVVARE---RARRKEE 204
           +  +V R+     +RKE+
Sbjct: 183 LQDIVIRQSKVTGKRKED 196

[Close]

BLAST of CSPI01G25630 vs. NCBI nr
Match: gi|778662161|ref|XP_011659447.1| (PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 9.5e-175
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 1


Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQS-NNIGLLNE 300
           STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQS NNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]

BLAST of CSPI01G25630 vs. NCBI nr
Match: gi|659099270|ref|XP_008450515.1| (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo])

HSP 1 Score: 600.9 bits (1548), Expect = 1.3e-168
Identity = 312/325 (96.00%), Postives = 317/325 (97.54%), Query Frame = 1


Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSST+SSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAFE+PAV
Sbjct: 181 RAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQS-NNIGLLNE 300
           STLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQS NNIGLLNE
Sbjct: 241 STLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]

BLAST of CSPI01G25630 vs. NCBI nr
Match: gi|1009116458|ref|XP_015874783.1| (PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba])

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 167/350 (47.71%), Postives = 207/350 (59.14%), Query Frame = 1


Query: 1   MNHPPLPPP-PSTPNPPTKM-----------LKECGNCGSQGRWILHHVRIRGINRRLCT 60
           MN P   P   S PNP +               ECGNCGSQ RW+LHHVRIRGI+RRLCT
Sbjct: 1   MNQPSTKPNNTSNPNPNSNARAPPALAAAAAAAECGNCGSQKRWVLHHVRIRGIHRRLCT 60

Query: 61  SCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTT 120
           SCVLRLHPSSFCPSC Q YD + +P  S R TC+KCSS THSHC    + P P   S+TT
Sbjct: 61  SCVLRLHPSSFCPSCLQCYDTTNTPVSSKRLTCAKCSSFTHSHCA---SLPPPSASSTTT 120

Query: 121 -----SSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIV 180
                SS+YLCPPCA PNF+FFD DS P    K+ID++ A+VLLCA+KIAS SMAKAVIV
Sbjct: 121 NTTPSSSTYLCPPCATPNFTFFDLDSDPN---KAIDKRLALVLLCASKIASTSMAKAVIV 180

Query: 181 ARADAERKVREAAMARKRAREALEHVGFVV--ARERARRKEEASV-EVSGSGNLGVKEKE 240
           ARA+AER+VREAA+ARKRAREAL+H+  +V    ++  RK+ A V EVSGS NL  K KE
Sbjct: 181 ARAEAERRVREAALARKRAREALDHLALLVHSRGDKVVRKDVAEVSEVSGSANLVHKHKE 240

Query: 241 RNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARH 300
           + +   P + A                  +Q +E  NGF         + + S   + + 
Sbjct: 241 KEKEKNPPLFA------------------SQGKEMFNGFNSPRQNPAMKPSGSPPPNKKS 300

Query: 301 KNVEVAERLQSNNIGLLNEKEKN------ENGEVEHVKNDHIGGTVNTTK 325
            N E      + + G +N+KEK+      E+ E+E  KN   G  V   K
Sbjct: 301 NNGEPEHGCANQSNGNVNDKEKSGDLVKRESMELEQ-KNHGRGENVPAAK 325

[Close]

BLAST of CSPI01G25630 vs. NCBI nr
Match: gi|802755152|ref|XP_012088829.1| (PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas])

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 1


Query: 22  ECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
           +C +C S+  W+LHHVR+RGI RRLCT CVLRLHP+SFCP CF FYD +  P PS R +C
Sbjct: 25  DCSHCRSKETWLLHHVRLRGIYRRLCTCCVLRLHPASFCPLCFTFYD-TTPPPPSKRLSC 84

Query: 82  SKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRK 141
           S CSS THSHC            S + S ++LCPPCA PNFSFF  D   + + ++ID+K
Sbjct: 85  SNCSSFTHSHCAP----------SQSPSFAFLCPPCADPNFSFFHLD---KTNNRTIDKK 144

Query: 142 TAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRK 201
            A VLLCAAKIA+ SMAKAV+VARA+AER+VREAA+ RKRAREALE+V  V     A+RK
Sbjct: 145 MATVLLCAAKIAACSMAKAVVVARAEAERRVREAAVCRKRAREALENVALV-----AKRK 204

Query: 202 EEASVEVSGSGNLGVKEKE 221
           E  SVEVSGSGNLG +E++
Sbjct: 205 EVESVEVSGSGNLGKRERD 204

[Close]

BLAST of CSPI01G25630 vs. NCBI nr
Match: gi|1000981027|ref|XP_015570582.1| (PREDICTED: uncharacterized protein LOC8274959 [Ricinus communis])

HSP 1 Score: 204.9 bits (520), Expect = 2.1e-49
Identity = 123/226 (54.42%), Postives = 153/226 (67.70%), Query Frame = 1


Query: 10  PSTPNPP-TKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYD 69
           P TPN   T  +  CGNC S+  ++LHHVR+RG++RRLCTSCVLR HPSSFCP CF FYD
Sbjct: 4   PITPNKSNTSTIGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYD 63

Query: 70  LSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSD 129
            S  P PS R +CS C+S THSHC            +S+    +LCPPCA  NF+FF+ +
Sbjct: 64  TSPPP-PSKRISCSNCTSFTHSHCA-----------TSSPPFPFLCPPCADANFNFFNFE 123

Query: 130 SKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 189
           +   I+ K+ID+  A VLLCAAKIA+ SMAKAV VAR +AER+VREAA+ RKRAREALEH
Sbjct: 124 N---INKKTIDKDMATVLLCAAKIAANSMAKAVNVARTEAERRVREAAVCRKRAREALEH 183

Query: 190 VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENA 235
           V F+     A+RK+  SV+VS S +LG K    N T+G    A +A
Sbjct: 184 VLFL-----AKRKDADSVQVSASAHLG-KRVINNITIGSPQNANSA 208

The following BLAST results are available for this feature:

BLAST of CSPI01G25630 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G25630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYS3_CUCSA	6.6e-175	99.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1	[more]
A0A067JHK0_JATCU	1.7e-53	60.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1	[more]
B9RFQ8_RICCO	1.5e-49	54.42	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1	[more]
A0A061F375_THECC	3.8e-45	54.77	DNA binding protein, putative OS=Theobroma cacao GN=TCM_026837 PE=4 SV=1	[more]
A0A067DPC4_CITSI	3.2e-44	54.27	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025319mg PE=4 SV=1	[more]

BLAST of CSPI01G25630 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09520.1	5.6e-32	36.06	LOCATED IN: chloroplast	[more]
AT3G17460.1	4.6e-18	33.84	PHD finger family protein	[more]

BLAST of CSPI01G25630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662161\|ref\|XP_011659447.1\|	9.5e-175	99.69	PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus]	[more]
gi\|659099270\|ref\|XP_008450515.1\|	1.3e-168	96.00	PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo]	[more]
gi\|1009116458\|ref\|XP_015874783.1\|	2.7e-60	47.71	PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba]	[more]
gi\|802755152\|ref\|XP_012088829.1\|	2.4e-53	60.30	PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas]	[more]
gi\|1000981027\|ref\|XP_015570582.1\|	2.1e-49	54.42	PREDICTED: uncharacterized protein LOC8274959 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019786	Zinc_finger_PHD-type_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G25630.1	CSPI01G25630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 47..117 scor
None	No IPR available	unknown	Coil	Coil	coord: 165..185 scor
None	No IPR available	PANTHER	PTHR34451	FAMILY NOT NAMED	coord: 6..322 score: 6.1
None	No IPR available	PANTHER	PTHR34451:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MTO12	coord: 6..322 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G25630	Cla005145	Watermelon (97103) v1	cpiwmB015
CSPI01G25630	Csa1G560710	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G25630	MELO3C015242	Melon (DHL92) v3.5.1	cpimeB061
CSPI01G25630	ClCG03G017870	Watermelon (Charleston Gray)	cpiwcgB042
CSPI01G25630	MELO3C015242.2	Melon (DHL92) v3.6.1	cpimedB055
CSPI01G25630	CsaV3_1G038030	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G25630	Cla97C03G068270	Watermelon (97103) v2	cpiwmbB037
CSPI01G25630	Bhi02G001834	Wax gourd	cpiwgoB087
CSPI01G25630	Cucsa.050900	Cucumber (Gy14) v1	cgycpiB034
CSPI01G25630	CmaCh10G011820	Cucurbita maxima (Rimu)	cmacpiB054
CSPI01G25630	CmoCh10G012600	Cucurbita moschata (Rifu)	cmocpiB045
CSPI01G25630	Cp4.1LG18g00010	Cucurbita pepo (Zucchini)	cpecpiB367

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G25630	Cucurbita maxima (Rimu)	cmacpiB105
CSPI01G25630	Cucurbita moschata (Rifu)	cmocpiB099
CSPI01G25630	Cucurbita pepo (Zucchini)	cpecpiB664
CSPI01G25630	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G25630	Bottle gourd (USVL1VR-Ls)	cpilsiB076
CSPI01G25630	Melon (DHL92) v3.6.1	cpimedB036
CSPI01G25630	Cucumber (Gy14) v2	cgybcpiB002