Csa1G538800 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G538800
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	50S ribosomal protein L33; contains IPR001705 (Ribosomal protein L33), IPR011332 (Ribosomal protein, zinc-binding domain)
Location	Chr1 : 19838609 .. 19840179 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCAAACCTCATATTCTTCACATTTCTTCCACTAATTCCCTCCATCTACCCTTGCCGCCGATCAGCTGTGCCCCTGCCTTCCCGCCGCCGTCGCCGCCGGTTAGTTTCAACCCTTTATTTTTTTCACTCTCTTTTGAATGTATATGTGTACGTGCGTGAAAATATAGAGAACATGAAGTATCCTCGATGTATCCGTATCTCGTAACTGTATTGCTTCATAGTTGGTTCATAATGTGCCTCTCGCTTATTGGTTTTATTGTAAGAAATCACTCTAATAGGTTTCCACCTGTTTGATCTGCTAAAAAGGGGTGGCTTATTTGTTGTTTTCCTGCTCCTAATAATTGGGTTGAAATATGAATTTAATATCTGAGTTTTCAGCTTTGTGACTATTTGTTACATGAACTTTAAAATATTACCAGTAGGTTCATGAACTTTTAATGGAAGTGTTCAATAAATCTCTGAACGGCTGATGGGTGTTAATGTTCAATTTTGTGTCTAGGTCTCATAGTTTTCAATTTTGATCGAAATATTTAACTTCCTTTAAATCTAGGGACGTGCTAAACACAATTTTGAAAGTTTAGGGAAATAAAATTCAATTCTATATCAGCTAGAATGGTTCATTTTAAAATGTTTAAATGTGTCAAAGACTTACTGAACACATAATTGAATCCATTAGACACTTTTATAGTTTAGGGATCTATTAGACACAAAATTGAAAATTCAAGTACCCATTATACACATGTTGTATAAACAAACATGAAAGAGATTGGTGATTTAGCTATATTTGAGTGAGAAAACCTGTGTTAAAATCCATATAAGTTCATTTAACTTGGCATCTGCACAGTTTCGTTGCAAATAGCTGCTTGAATATGTTTCCGTTTCCTCGGATTTCAATGTATTCGTATTCTTTCAGGGACGCTCTGTTGTTTCATCTTGTATTTGGGCTAATCTTTGGATATTTCATTTATCAATGAAATGGTTTCTTGTGTATATATGTTTTCTTTTCCTCGTTTTCTTCATGCTAAGTCTATAGTATAGCATACGAAGAACTAGCTTTCACAATGACTGGATGAGTTAATTTTGTTTTTCTCTTTTTGGTGTTAGGAAATGGGTGACAAGAAAAAGAAAGCTACTATGTTCATCCGACTTGTATCAGCTGCTGGGACTGGATTCTTCTATGTTAAAAGAAAGCCAACCAAAATTACAGAGAAGCTCGAGTTCCGAAAATACGATCCTCGGGTCAATCGACATGTTTTGTTTACGGAAGCGAAAATGAAATGAAAGAAGAGAGGAATAAAAATCAGTTATCCTCTCAACCTGGACCTATTCTTCTTTTGGTCCATAGGTTTTGAAGCTTTGCAATTAGTCTTCTGCTGCTTCTCCATTTTAGACTGATGTTTCATATTTGCTAGTCTTTTCCCTTGGCTCATCTTCAGCAGTATGTTTGTACATCAAATTCTATGGCCAGGAATTGTTTGCCGCTTGATCTCTTGCGGTCAAATGTGTTGAGATAAATTATAAGATATAGTTTTGAGTTATTAAGCTTGTTGATTCATGATTGCATCTT

mRNA sequence

ATGGGTGACAAGAAAAAGAAAGCTACTATGTTCATCCGACTTGTATCAGCTGCTGGGACTGGATTCTTCTATGTTAAAAGAAAGCCAACCAAAATTACAGAGAAGCTCGAGTTCCGAAAATACGATCCTCGGGTCAATCGACATGTTTTGTTTACGGAAGCGAAAATGAAATGA

Coding sequence (CDS)

ATGGGTGACAAGAAAAAGAAAGCTACTATGTTCATCCGACTTGTATCAGCTGCTGGGACTGGATTCTTCTATGTTAAAAGAAAGCCAACCAAAATTACAGAGAAGCTCGAGTTCCGAAAATACGATCCTCGGGTCAATCGACATGTTTTGTTTACGGAAGCGAAAATGAAATGA

Protein sequence

MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK*

Homology

[Close]

BLAST of Csa1G538800 vs. Swiss-Prot
Match: RL33_MAGSA (50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rpmG PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.8e-12
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 1


Query: 6  KKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          K AT+ I+L+S AGTGFFYV K+ P K TEKLEFRKYDP V +HV F EAK+K
Sbjct: 3  KPATILIKLLSTAGTGFFYVAKKNPRKTTEKLEFRKYDPVVRKHVQFKEAKIK 55

[Close]

BLAST of Csa1G538800 vs. Swiss-Prot
Match: RL33_RHOCS (50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpmG PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-12
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 1


Query: 6  KKATMFIRLVSAAGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          K+ T+ I+LVS+A TGFFYVK+K P K TEKLEF+KYDP   +HV+F EAKMK
Sbjct: 3  KQNTVLIKLVSSADTGFFYVKKKNPRKTTEKLEFKKYDPVARKHVVFKEAKMK 55

[Close]

BLAST of Csa1G538800 vs. Swiss-Prot
Match: RL33_ORITI (50S ribosomal protein L33 OS=Orientia tsutsugamushi (strain Ikeda) GN=rpmG PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-11
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 1


Query: 5  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          +KK  + ++LVS+AGTG F+VK R P   TEKL FRKYDP+V +HV FTEAK+K
Sbjct: 3  RKKKKVLVKLVSSAGTGVFWVKQRNPKTQTEKLSFRKYDPKVRKHVQFTEAKIK 56

[Close]

BLAST of Csa1G538800 vs. Swiss-Prot
Match: RL33_RICB8 (50S ribosomal protein L33 OS=Rickettsia bellii (strain OSU 85-389) GN=rpmG PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-11
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 1


Query: 5  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          KK   + +RLVS AGTGFF VK R P   TEKL FRKYDP+V +HVLF E K+K
Sbjct: 3  KKNKNILVRLVSTAGTGFFLVKKRNPKTQTEKLSFRKYDPKVRKHVLFKEEKIK 56

[Close]

BLAST of Csa1G538800 vs. Swiss-Prot
Match: RL33_RICBR (50S ribosomal protein L33 OS=Rickettsia bellii (strain RML369-C) GN=rpmG PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-11
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 1


Query: 5  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          KK   + +RLVS AGTGFF VK R P   TEKL FRKYDP+V +HVLF E K+K
Sbjct: 3  KKNKNILVRLVSTAGTGFFLVKKRNPKTQTEKLSFRKYDPKVRKHVLFKEEKIK 56

[Close]

BLAST of Csa1G538800 vs. TrEMBL
Match: A0A0A0LVW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538800 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.5e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. TrEMBL
Match: M5XFP4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014533mg PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.1e-23
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKAT+FIRLVSAAGTGFFYVKRKPTK+TEKLEFRK+DPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATVFIRLVSAAGTGFFYVKRKPTKVTEKLEFRKFDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. TrEMBL
Match: A0A0B2SLG3_GLYSO (50S ribosomal protein L33 OS=Glycine soja GN=glysoja_039671 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.4e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. TrEMBL
Match: A0A0R0GCF5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G127700 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.4e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 31 MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 87

[Close]

BLAST of Csa1G538800 vs. TrEMBL
Match: A0A151R6A5_CAJCA (50S ribosomal protein L33 OS=Cajanus cajan GN=KK1_040590 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.4e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. TAIR10
Match: AT3G06320.1 (AT3G06320.1 Ribosomal protein L33 family protein)

HSP 1 Score: 99.4 bits (246), Expect = 7.9e-22
Identity = 50/58 (86.21%), Postives = 50/58 (86.21%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Sbjct: 1  MGDKRKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58

[Close]

BLAST of Csa1G538800 vs. TAIR10
Match: AT5G18790.1 (AT5G18790.1 Ribosomal protein L33 family protein)

HSP 1 Score: 99.4 bits (246), Expect = 7.9e-22
Identity = 50/58 (86.21%), Postives = 50/58 (86.21%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Sbjct: 1  MGDKRKKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58

[Close]

BLAST of Csa1G538800 vs. NCBI nr
Match: gi|449435542|ref|XP_004135554.1| (PREDICTED: 54S ribosomal protein L39, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 7.9e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. NCBI nr
Match: gi|596194192|ref|XP_007223555.1| (hypothetical protein PRUPE_ppa014533mg [Prunus persica])

HSP 1 Score: 114.0 bits (284), Expect = 8.8e-23
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKAT+FIRLVSAAGTGFFYVKRKPTK+TEKLEFRK+DPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATVFIRLVSAAGTGFFYVKRKPTKVTEKLEFRKFDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. NCBI nr
Match: gi|470121449|ref|XP_004296781.1| (PREDICTED: 54S ribosomal protein L39, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-21
Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKAT+FIRLVSAAGTGFFYVK+KP+++ EKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKATLFIRLVSAAGTGFFYVKKKPSRMVEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. NCBI nr
Match: gi|356563842|ref|XP_003550167.1| (PREDICTED: 50S ribosomal protein L33-like [Glycine max])

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1  MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57

[Close]

BLAST of Csa1G538800 vs. NCBI nr
Match: gi|955365372|ref|XP_014622782.1| (PREDICTED: 50S ribosomal protein L33-like isoform X1 [Glycine max])

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 1


Query: 1  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 58
          MGDKKKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 31 MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 87

The following BLAST results are available for this feature:

BLAST of Csa1G538800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL33_MAGSA	1.8e-12	67.92	50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
RL33_RHOCS	3.1e-12	66.04	50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN...	[more]
RL33_ORITI	3.5e-11	61.11	50S ribosomal protein L33 OS=Orientia tsutsugamushi (strain Ikeda) GN=rpmG PE=3 ...	[more]
RL33_RICB8	3.5e-11	62.96	50S ribosomal protein L33 OS=Rickettsia bellii (strain OSU 85-389) GN=rpmG PE=3 ...	[more]
RL33_RICBR	3.5e-11	62.96	50S ribosomal protein L33 OS=Rickettsia bellii (strain RML369-C) GN=rpmG PE=3 SV...	[more]

BLAST of Csa1G538800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVW9_CUCSA	5.5e-24	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538800 PE=4 SV=1	[more]
M5XFP4_PRUPE	6.1e-23	94.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014533mg PE=4 SV=1	[more]
A0A0B2SLG3_GLYSO	3.4e-21	89.47	50S ribosomal protein L33 OS=Glycine soja GN=glysoja_039671 PE=4 SV=1	[more]
A0A0R0GCF5_SOYBN	3.4e-21	89.47	Uncharacterized protein OS=Glycine max GN=GLYMA_14G127700 PE=4 SV=1	[more]
A0A151R6A5_CAJCA	3.4e-21	89.47	50S ribosomal protein L33 OS=Cajanus cajan GN=KK1_040590 PE=4 SV=1	[more]

BLAST of Csa1G538800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06320.1	7.9e-22	86.21	Ribosomal protein L33 family protein	[more]
AT5G18790.1	7.9e-22	86.21	Ribosomal protein L33 family protein	[more]

BLAST of Csa1G538800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435542\|ref\|XP_004135554.1\|	7.9e-24	100.00	PREDICTED: 54S ribosomal protein L39, mitochondrial-like [Cucumis sativus]	[more]
gi\|596194192\|ref\|XP_007223555.1\|	8.8e-23	94.74	hypothetical protein PRUPE_ppa014533mg [Prunus persica]	[more]
gi\|470121449\|ref\|XP_004296781.1\|	2.2e-21	89.47	PREDICTED: 54S ribosomal protein L39, mitochondrial [Fragaria vesca subsp. vesca...	[more]
gi\|356563842\|ref\|XP_003550167.1\|	4.8e-21	89.47	PREDICTED: 50S ribosomal protein L33-like [Glycine max]	[more]
gi\|955365372\|ref\|XP_014622782.1\|	4.8e-21	89.47	PREDICTED: 50S ribosomal protein L33-like isoform X1 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001705	Ribosomal_L33
IPR011332	Ribosomal_zn-bd

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU087834	cucumber EST collection version 3.0	transcribed_cluster
CU099897	cucumber EST collection version 3.0	transcribed_cluster
CU144681	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G538800.1	Csa1G538800.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU087834	CU087834	transcribed_cluster
CU144681	CU144681	transcribed_cluster
CU099897	CU099897	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 12..55 score: 5.1
IPR001705	Ribosomal protein L33	TIGRFAMs	TIGR01023	TIGR01023	coord: 4..57 score: 7.8
IPR011332	Zinc-binding ribosomal protein	unknown	SSF57829	Zn-binding ribosomal proteins	coord: 4..55 score: 4.76
None	No IPR available	PANTHER	PTHR15238	FAMILY NOT NAMED	coord: 1..57 score: 4.6
None	No IPR available	PANTHER	PTHR15238:SF10	SUBFAMILY NOT NAMED	coord: 1..57 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G538800	Cla019531	Watermelon (97103) v1	cuwmB015
Csa1G538800	MELO3C002800	Melon (DHL92) v3.5.1	cumeB018
Csa1G538800	ClCG03G006340	Watermelon (Charleston Gray)	cuwcgB041
Csa1G538800	Lsi02G009360	Bottle gourd (USVL1VR-Ls)	culsiB034
Csa1G538800	MELO3C002800.2	Melon (DHL92) v3.6.1	cumedB013
Csa1G538800	Cla97C03G057610	Watermelon (97103) v2	cuwmbB038
Csa1G538800	Bhi08G000995	Wax gourd	cuwgoB064
Csa1G538800	CSPI01G25090	Wild cucumber (PI 183967)	cpicuB001
Csa1G538800	Cucsa.167180	Cucumber (Gy14) v1	cgycuB255
Csa1G538800	CsGy1G024510	Cucumber (Gy14) v2	cgybcuB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G538800	Watermelon (97103) v2	cuwmbB039
Csa1G538800	Wax gourd	cuwgoB053
Csa1G538800	Cucurbita maxima (Rimu)	cmacuB208
Csa1G538800	Cucurbita maxima (Rimu)	cmacuB220
Csa1G538800	Cucurbita maxima (Rimu)	cmacuB392
Csa1G538800	Cucurbita maxima (Rimu)	cmacuB401
Csa1G538800	Cucurbita moschata (Rifu)	cmocuB193
Csa1G538800	Cucurbita moschata (Rifu)	cmocuB205
Csa1G538800	Cucurbita moschata (Rifu)	cmocuB381
Csa1G538800	Cucurbita moschata (Rifu)	cmocuB388
Csa1G538800	Watermelon (Charleston Gray)	cuwcgB042
Csa1G538800	Watermelon (97103) v1	cuwmB014
Csa1G538800	Cucurbita pepo (Zucchini)	cpecuB030
Csa1G538800	Cucurbita pepo (Zucchini)	cpecuB022
Csa1G538800	Cucurbita pepo (Zucchini)	cpecuB508
Csa1G538800	Cucurbita pepo (Zucchini)	cpecuB519
Csa1G538800	Bottle gourd (USVL1VR-Ls)	culsiB023
Csa1G538800	Silver-seed gourd	carcuB0426
Csa1G538800	Silver-seed gourd	carcuB0453
Csa1G538800	Silver-seed gourd	carcuB0455