Csa1G369510 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G369510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 14294037 .. 14294417 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAACTCATTGCAGTATCAAATACTCAAAACATAAAACACGCATTACAATTTTAGAAAGCCGCAGAGCAACAATAACAAAAAATAATGTGTTACCCACACCATTTCCTGTCTCGCAGGGACTTTTCGTCCTTGCAATGCAATTGGGTTCTCTTTCAGACCACACCCGCGGAGGACGCGACACCGGCGATTGAGAGTTGCGGTGATGAGTCGGGGAAAAGGCGGTGCTTGTGCTCGCCGACAAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACAGAAATGAGTATGTTTGGGTTGCACGGCGGAGGACGGTTAAAAATGGACCGGCGGAGGGTAAAATATTGACGAACGATAAGTAATTACTGTTTGTGGTGTCTGTAA

mRNA sequence

ATGTGTTACCCACACCATTTCCTGTCTCGCAGGGACTTTTCGTCCTTGCAATGCAATTGGGTTCTCTTTCAGACCACACCCGCGGAGGACGCGACACCGGCGATTGAGAGTTGCGGTGATGAGTCGGGGAAAAGGCGGTGCTTGTGCTCGCCGACAAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACAGAAATGAGTATGTTTGGGTTGCACGGCGGAGGACGGTTAAAAATGGACCGGCGGAGGGTAAAATATTGACGAACGATAAGTAA

Coding sequence (CDS)

ATGTGTTACCCACACCATTTCCTGTCTCGCAGGGACTTTTCGTCCTTGCAATGCAATTGGGTTCTCTTTCAGACCACACCCGCGGAGGACGCGACACCGGCGATTGAGAGTTGCGGTGATGAGTCGGGGAAAAGGCGGTGCTTGTGCTCGCCGACAAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACAGAAATGAGTATGTTTGGGTTGCACGGCGGAGGACGGTTAAAAATGGACCGGCGGAGGGTAAAATATTGACGAACGATAAGTAA

Protein sequence

MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRCRLHRNEYVWVARRRTVKNGPAEGKILTNDK*
Homology
[Close]
BLAST of Csa1G369510 vs. TrEMBL
Match: A0A0A0LZG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G369510 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-48
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60
          MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC
Sbjct: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60

Query: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 91
          RLHRNEYVWVARRRTVKNGPAEGKILTNDK
Sbjct: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 90

[Close]
BLAST of Csa1G369510 vs. TrEMBL
Match: A0A151S3D7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028968 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.7e-08
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCG---DESGKRRCLCSPTRHPGS 60
          MC+P      R+   +   W++FQ    E A   +   G   + +  +RC+CSP++HPGS
Sbjct: 1  MCHPGVSFVEREGLVVHTRWLVFQVP--EHAPRQVHGGGTSEESASVKRCVCSPSQHPGS 60

Query: 61 FRCRLHRNEYVWVARRRTVK 78
          FRCRLH  EYVW  R RT+K
Sbjct: 61 FRCRLHHAEYVW--RGRTIK 76

[Close]
BLAST of Csa1G369510 vs. TrEMBL
Match: A0A072UBV0_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g086445 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-07
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGD--------ESGK-RRCLCSP 60
          MC+P      ++   +   W++ Q +  E+  P     GD        ESG  +RC+CSP
Sbjct: 1  MCHPKIPFVNQEALIVHTRWLVLQRSNGEEHEPIHVHHGDGGDSGSSGESGSVKRCVCSP 60

Query: 61 TRHPGSFRCRLHRNEYVWVARRRTVK 78
          ++HPGSFRCR H  EYVW  R RT+K
Sbjct: 61 SQHPGSFRCRQHHGEYVW--RGRTIK 84

[Close]
BLAST of Csa1G369510 vs. TrEMBL
Match: V4TV07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010038mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-07
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 1 

Query: 1  MCYPH--HFLSRRDFSSLQCNWVLFQTTPAEDATPAI--ESCGDESGK-----RRCLCSP 60
          MCYP     +SR D   +Q  W + +  P + A   +  E+ G + G      ++C+CSP
Sbjct: 1  MCYPTGVSLVSRTDLVLVQGRWFVSRV-PVQGANEEVGGEAAGGDGGSGGGLIKQCVCSP 60

Query: 61 TRHPGSFRCRLHRNEYVWVARRRTVKNGP 81
          T HPGSFRCR H  +YVW  R   V++ P
Sbjct: 61 TTHPGSFRCRHHHAQYVWRGRITKVESTP 88

[Close]
BLAST of Csa1G369510 vs. TrEMBL
Match: A0A0S3TCE9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G243800 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-07
Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60
          MC+P      R+   L+  W+L    P +       S G+    +RC CSP++HPGSFRC
Sbjct: 1  MCHPGLPFLNREAFMLRRRWLL-SAVPGQPRDGG-GSSGESGSAKRCACSPSQHPGSFRC 60

Query: 61 RLHRNEYVWVAR 73
          RLH  EYVW  R
Sbjct: 61 RLHHGEYVWRGR 70

[Close]
BLAST of Csa1G369510 vs. TAIR10
Match: AT1G52342.1 (AT1G52342.1 unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-07
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 1 

Query: 30 DATPAIESCGDES-GKRRCLCSPTRHPGSFRCRLHRNEYVWV 71
          +AT    S GD   GK++C+CSP++HP SF+CR H++EY W+
Sbjct: 32 EATAGHRSGGDGGGGKKKCVCSPSKHPRSFKCRYHQHEYQWL 73

[Close]
BLAST of Csa1G369510 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 47.4 bits (111), Expect = 5.6e-06
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1 

Query: 44  KRRCLCSPTRHPGSFRCRLHRN 66
           +RRC+CSPT HPGSFRC LH+N
Sbjct: 123 RRRCMCSPTTHPGSFRCSLHKN 144

[Close]
BLAST of Csa1G369510 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 46.6 bits (109), Expect = 9.5e-06
Identity = 17/21 (80.95%), Postives = 17/21 (80.95%), Query Frame = 1 

Query: 45  RRCLCSPTRHPGSFRCRLHRN 66
           RRC+CSPT HPGSFRC LH+N
Sbjct: 121 RRCMCSPTTHPGSFRCSLHKN 141

[Close]
BLAST of Csa1G369510 vs. NCBI nr
Match: gi|700210260|gb|KGN65356.1| (hypothetical protein Csa_1G369510 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-48
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60
          MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC
Sbjct: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60

Query: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 91
          RLHRNEYVWVARRRTVKNGPAEGKILTNDK
Sbjct: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 90

[Close]
BLAST of Csa1G369510 vs. NCBI nr
Match: gi|1012338069|gb|KYP49330.1| (hypothetical protein KK1_028968 [Cajanus cajan])

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCG---DESGKRRCLCSPTRHPGS 60
          MC+P      R+   +   W++FQ    E A   +   G   + +  +RC+CSP++HPGS
Sbjct: 1  MCHPGVSFVEREGLVVHTRWLVFQVP--EHAPRQVHGGGTSEESASVKRCVCSPSQHPGS 60

Query: 61 FRCRLHRNEYVWVARRRTVK 78
          FRCRLH  EYVW  R RT+K
Sbjct: 61 FRCRLHHAEYVW--RGRTIK 76

[Close]
BLAST of Csa1G369510 vs. NCBI nr
Match: gi|922354499|ref|XP_013453064.1| (hypothetical protein MTR_6g086445 [Medicago truncatula])

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGD--------ESGK-RRCLCSP 60
          MC+P      ++   +   W++ Q +  E+  P     GD        ESG  +RC+CSP
Sbjct: 1  MCHPKIPFVNQEALIVHTRWLVLQRSNGEEHEPIHVHHGDGGDSGSSGESGSVKRCVCSP 60

Query: 61 TRHPGSFRCRLHRNEYVWVARRRTVK 78
          ++HPGSFRCR H  EYVW  R RT+K
Sbjct: 61 SQHPGSFRCRQHHGEYVW--RGRTIK 84

[Close]
BLAST of Csa1G369510 vs. NCBI nr
Match: gi|567918264|ref|XP_006451138.1| (hypothetical protein CICLE_v10010038mg [Citrus clementina])

HSP 1 Score: 62.0 bits (149), Expect = 6.2e-07
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 1 

Query: 1  MCYPH--HFLSRRDFSSLQCNWVLFQTTPAEDATPAI--ESCGDESGK-----RRCLCSP 60
          MCYP     +SR D   +Q  W + +  P + A   +  E+ G + G      ++C+CSP
Sbjct: 1  MCYPTGVSLVSRTDLVLVQGRWFVSRV-PVQGANEEVGGEAAGGDGGSGGGLIKQCVCSP 60

Query: 61 TRHPGSFRCRLHRNEYVWVARRRTVKNGP 81
          T HPGSFRCR H  +YVW  R   V++ P
Sbjct: 61 TTHPGSFRCRHHHAQYVWRGRITKVESTP 88

[Close]
BLAST of Csa1G369510 vs. NCBI nr
Match: gi|965617697|dbj|BAU02847.1| (hypothetical protein VIGAN_11243800 [Vigna angularis var. angularis])

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-07
Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1 

Query: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60
          MC+P      R+   L+  W+L    P +       S G+    +RC CSP++HPGSFRC
Sbjct: 1  MCHPGLPFLNREAFMLRRRWLL-SAVPGQPRDGG-GSSGESGSAKRCACSPSQHPGSFRC 60

Query: 61 RLHRNEYVWVAR 73
          RLH  EYVW  R
Sbjct: 61 RLHHGEYVWRGR 70

The following BLAST results are available for this feature:
BLAST of Csa1G369510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZG6_CUCSA1.3e-48100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G369510 PE=4 SV=1[more]
A0A151S3D7_CAJCA8.7e-0841.25Uncharacterized protein OS=Cajanus cajan GN=KK1_028968 PE=4 SV=1[more]
A0A072UBV0_MEDTR1.5e-0739.53Uncharacterized protein OS=Medicago truncatula GN=MTR_6g086445 PE=4 SV=1[more]
V4TV07_9ROSI4.3e-0738.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010038mg PE=4 SV=1[more]
A0A0S3TCE9_PHAAN5.6e-0741.67Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G243800 PE=... [more]
BLAST of Csa1G369510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52342.11.7e-0750.00 unknown protein[more]
AT5G25280.15.6e-0677.27 serine-rich protein-related[more]
AT5G11090.19.5e-0680.95 serine-rich protein-related[more]
BLAST of Csa1G369510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210260|gb|KGN65356.1|1.9e-48100.00hypothetical protein Csa_1G369510 [Cucumis sativus][more]
gi|1012338069|gb|KYP49330.1|1.2e-0741.25hypothetical protein KK1_028968 [Cajanus cajan][more]
gi|922354499|ref|XP_013453064.1|2.1e-0739.53hypothetical protein MTR_6g086445 [Medicago truncatula][more]
gi|567918264|ref|XP_006451138.1|6.2e-0738.20hypothetical protein CICLE_v10010038mg [Citrus clementina][more]
gi|965617697|dbj|BAU02847.1|8.1e-0741.67hypothetical protein VIGAN_11243800 [Vigna angularis var. angularis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU086887cucumber EST collection version 3.0transcribed_cluster
CU131890cucumber EST collection version 3.0transcribed_cluster
CU160211cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G369510.1Csa1G369510.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160211CU160211transcribed_cluster
CU086887CU086887transcribed_cluster
CU131890CU131890transcribed_cluster