Csa1G257930 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATTCCTCAATCTGTAATTCCCTTAAAAATTTAATGGTAGAATTCGTACCCCCCCACTTGTTCTCTGTTTCTAATGGAAAAAGGATGCGGCCGTAATTCATTTCCACAGGCATTCATTTCAGATTTTCCATAACTGTCTTAACTTCAATTGGCAATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCCCCGTACCTCATCCCCTTTTGAACAACAATAATGGCAGAAAATTCGGAATCACGTCGGCAAAACGTACACAAGACTCCGATTCCGATTCCGCTTCTTCAACCCAACCAAATCAATTCAAATTTCCATCTCTGAGAGTATCAAATCCACTTCTAGCCCGATCTGTCGTTTCGGTCCTCGGATTAGGGTTCGTCGATGCAGGGTACGAAAATTTCACCTCTAATTAATTTCGATTTTGAGAATTGCTCTGTTTTATTTTTGTTTTGACTGAAACTGAAGTCGAATTAGGGTTTGGAATGATTAGGTATAGCGGAGATTGGTCTAGAATTGGAGCGATTACGAAGGAAACTGAAGATTTGCTTAAGATTGGAGCTTTGTTGGTTGTTCCGTTTTGTGTATTTCTCGTATTTTCTTTCTCAAAATATGATTCGGATTCTTCGTAAGTGTATGGATGATGGATTCCCCAAAATGGTTAGAAATAATTTCAATTTGAAAATGGTAGCTAAGCCAAAGTTGCTTTTTTTGGTTAGAAGGGAGATTTTGAAGAACATGTACAAAATTCATTTACTGATATGCACATGGTTCTTGTTGGTTTCCACTCTCATGTTTTAGAATTTAGTAAGCGTCACACTGTTTAGAAATAGTCATATTCGAACAAGAAATGATATCTAGGTGCATACATTCACTTTAGTAGCTTATTGGCT ATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCCCCGTACCTCATCCCCTTTTGAACAACAATAATGGCAGAAAATTCGGAATCACGTCGGCAAAACGTACACAAGACTCCGATTCCGATTCCGCTTCTTCAACCCAACCAAATCAATTCAAATTTCCATCTCTGAGAGTATCAAATCCACTTCTAGCCCGATCTGTCGTTTCGGTCCTCGGATTAGGGTTCGTCGATGCAGGGTATAGCGGAGATTGGTCTAGAATTGGAGCGATTACGAAGGAAACTGAAGATTTGCTTAAGATTGGAGCTTTGTTGGTTGTTCCGTTTTGTGTATTTCTCGTATTTTCTTTCTCAAAATATGATTCGGATTCTTCGTAA ATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCCCCGTACCTCATCCCCTTTTGAACAACAATAATGGCAGAAAATTCGGAATCACGTCGGCAAAACGTACACAAGACTCCGATTCCGATTCCGCTTCTTCAACCCAACCAAATCAATTCAAATTTCCATCTCTGAGAGTATCAAATCCACTTCTAGCCCGATCTGTCGTTTCGGTCCTCGGATTAGGGTTCGTCGATGCAGGGTATAGCGGAGATTGGTCTAGAATTGGAGCGATTACGAAGGAAACTGAAGATTTGCTTAAGATTGGAGCTTTGTTGGTTGTTCCGTTTTGTGTATTTCTCGTATTTTCTTTCTCAAAATATGATTCGGATTCTTCGTAA MAMVDSSFIFIGFSPVPHPLLNNNNGRKFGITSAKRTQDSDSDSASSTQPNQFKFPSLRVSNPLLARSVVSVLGLGFVDAGYSGDWSRIGAITKETEDLLKIGALLVVPFCVFLVFSFSKYDSDSS*
BLAST of Csa1G257930 vs. TrEMBL
Match: A0A0A0LWH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257930 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 7.0e-64 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Csa1G257930 vs. TrEMBL
Match: D7U1G5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00830 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.4e-24 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 1
BLAST of Csa1G257930 vs. TrEMBL
Match: A0A059CSI4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02516 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.1e-24 Identity = 69/126 (54.76%), Postives = 87/126 (69.05%), Query Frame = 1
BLAST of Csa1G257930 vs. TrEMBL
Match: A0A058ZTX1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01549 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23 Identity = 69/126 (54.76%), Postives = 86/126 (68.25%), Query Frame = 1
BLAST of Csa1G257930 vs. TrEMBL
Match: A0A0D2UZ55_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G368800 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1
BLAST of Csa1G257930 vs. TAIR10
Match: AT4G30845.1 (AT4G30845.1 unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21 Identity = 55/117 (47.01%), Postives = 73/117 (62.39%), Query Frame = 1
BLAST of Csa1G257930 vs. NCBI nr
Match: gi|449457863|ref|XP_004146667.1| (PREDICTED: uncharacterized protein LOC101206545 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Csa1G257930 vs. NCBI nr
Match: gi|659086235|ref|XP_008443827.1| (PREDICTED: uncharacterized protein LOC103487329 [Cucumis melo]) HSP 1 Score: 225.3 bits (573), Expect = 5.9e-56 Identity = 118/129 (91.47%), Postives = 120/129 (93.02%), Query Frame = 1
BLAST of Csa1G257930 vs. NCBI nr
Match: gi|694419824|ref|XP_009337849.1| (PREDICTED: uncharacterized protein LOC103930267 [Pyrus x bretschneideri]) HSP 1 Score: 121.7 bits (304), Expect = 9.2e-25 Identity = 65/126 (51.59%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Csa1G257930 vs. NCBI nr
Match: gi|470148842|ref|XP_004309956.1| (PREDICTED: uncharacterized protein LOC101291784 [Fragaria vesca subsp. vesca]) HSP 1 Score: 121.7 bits (304), Expect = 9.2e-25 Identity = 64/105 (60.95%), Postives = 76/105 (72.38%), Query Frame = 1
BLAST of Csa1G257930 vs. NCBI nr
Match: gi|225445770|ref|XP_002274551.1| (PREDICTED: uncharacterized protein LOC100267275 [Vitis vinifera]) HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|