Csa1G256790 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTAAGAATATTCATCTATGATCATTCTCTCTCCACATCTTTTGTTGTCTTGCCCATCCATGTTGTACTTGCTTCATTTAGTTATTCTATGGAGAAAAAGCCATATATTAGTCTATCATTCCCCTCGACTACATTTACATGCCCTTAATAATATTTTACTCAATCATCGATGTCATGGCGTTTGATTTGAAGAGTTCCTATTAAACAGGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAGATAAGTTCCGAAGGGCAAAAGTGCAGTGAACTTGATAAATTGTTGACCTCATTTTTTGTGTTCATTTCTGCTACATTGCAGTCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWPVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIWSLSSFLMRFFPSNAATVHRIERFQNILLYNSKLKCMLIWEFVDDVMIKGE*
BLAST of Csa1G256790 vs. TrEMBL
Match: A0A0A0LYV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256790 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 6.9e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of Csa1G256790 vs. TrEMBL
Match: A0A0A0LS19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 8.2e-59 Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 1
BLAST of Csa1G256790 vs. TrEMBL
Match: W9RID3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014580 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.7e-51 Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 1
BLAST of Csa1G256790 vs. TrEMBL
Match: A0A0D2S601_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G190000 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-49 Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 1
BLAST of Csa1G256790 vs. TrEMBL
Match: A0A0B0PYI7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12495 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-49 Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 1
BLAST of Csa1G256790 vs. TAIR10
Match: AT5G63040.1 (AT5G63040.1 unknown protein) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43 Identity = 86/109 (78.90%), Postives = 91/109 (83.49%), Query Frame = 1
BLAST of Csa1G256790 vs. TAIR10
Match: AT1G48460.1 (AT1G48460.1 unknown protein) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17 Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 1
BLAST of Csa1G256790 vs. NCBI nr
Match: gi|700210075|gb|KGN65171.1| (hypothetical protein Csa_1G256790 [Cucumis sativus]) HSP 1 Score: 311.2 bits (796), Expect = 9.9e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of Csa1G256790 vs. NCBI nr
Match: gi|778665047|ref|XP_011648473.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 2.5e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Csa1G256790 vs. NCBI nr
Match: gi|778655605|ref|XP_011656390.1| (PREDICTED: uncharacterized protein LOC105435726 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 1
BLAST of Csa1G256790 vs. NCBI nr
Match: gi|659129154|ref|XP_008464550.1| (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 223.8 bits (569), Expect = 2.1e-55 Identity = 112/119 (94.12%), Postives = 112/119 (94.12%), Query Frame = 1
BLAST of Csa1G256790 vs. NCBI nr
Match: gi|703122227|ref|XP_010102524.1| (hypothetical protein L484_014580 [Morus notabilis]) HSP 1 Score: 209.1 bits (531), Expect = 5.3e-51 Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|