CSPI01G17790 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGTCTGTTATTCAAATTGTCTTTCAAGTAAGAATATTCATCTATGATCATTCTCTCTCCACATCTTTTGTTGTCTTGCCCATCCATGTTGTACTTGCTTCATTTAGTTATTCTATGGAGAAAAAGCCATATATTAGTCTATCATTCCCCTCGACTACATTTACATGCCCTTAATAATATTTTACTCAATCATCGATGTCATGGCGTTTGATTTGAAGAGTTCCTATTAAACAGGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAACTGCTGCAACAGTGCAGTAAAGTGCAAGATAAGTTCCGAAGGGCAAAAGTGCAGTGAACTTGATAAATTGTTGACCTCATTTTTTGTGTTCATTTCTGCTACATTGCAGTCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGTCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAACTGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGTCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAACTGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGTTATGATAAAGGGAGAATGA
BLAST of CSPI01G17790 vs. TrEMBL
Match: A0A0A0LYV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256790 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 4.2e-79 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 1
BLAST of CSPI01G17790 vs. TrEMBL
Match: A0A0A0LS19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-55 Identity = 113/119 (94.96%), Postives = 113/119 (94.96%), Query Frame = 1
BLAST of CSPI01G17790 vs. TrEMBL
Match: W9RID3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014580 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.0e-48 Identity = 100/118 (84.75%), Postives = 106/118 (89.83%), Query Frame = 1
BLAST of CSPI01G17790 vs. TrEMBL
Match: A0A0D2S601_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G190000 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-47 Identity = 99/115 (86.09%), Postives = 105/115 (91.30%), Query Frame = 1
BLAST of CSPI01G17790 vs. TrEMBL
Match: A0A0D2RYX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G190000 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-47 Identity = 99/115 (86.09%), Postives = 105/115 (91.30%), Query Frame = 1
BLAST of CSPI01G17790 vs. TAIR10
Match: AT5G63040.1 (AT5G63040.1 unknown protein) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41 Identity = 85/109 (77.98%), Postives = 92/109 (84.40%), Query Frame = 1
BLAST of CSPI01G17790 vs. TAIR10
Match: AT1G48460.1 (AT1G48460.1 unknown protein) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1
BLAST of CSPI01G17790 vs. NCBI nr
Match: gi|700210075|gb|KGN65171.1| (hypothetical protein Csa_1G256790 [Cucumis sativus]) HSP 1 Score: 302.0 bits (772), Expect = 6.0e-79 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 1
BLAST of CSPI01G17790 vs. NCBI nr
Match: gi|778665047|ref|XP_011648473.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 3.4e-58 Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1
BLAST of CSPI01G17790 vs. NCBI nr
Match: gi|778655605|ref|XP_011656390.1| (PREDICTED: uncharacterized protein LOC105435726 [Cucumis sativus]) HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55 Identity = 113/119 (94.96%), Postives = 113/119 (94.96%), Query Frame = 1
BLAST of CSPI01G17790 vs. NCBI nr
Match: gi|659129154|ref|XP_008464550.1| (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 2.8e-52 Identity = 110/119 (92.44%), Postives = 110/119 (92.44%), Query Frame = 1
BLAST of CSPI01G17790 vs. NCBI nr
Match: gi|1009180919|ref|XP_015871886.1| (PREDICTED: uncharacterized protein LOC107408965, partial [Ziziphus jujuba]) HSP 1 Score: 201.8 bits (512), Expect = 8.4e-49 Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |