Csa1G222880 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G222880
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein GmTDF-5; contains IPR016024 (Armadillo-type fold)
Location	Chr1 : 11753457 .. 11754886 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTATGTAGAACCGAGAGCGCCACATCGTTCTCTCTCGAACAACCCCTGCTCCAGAATTCAAACTCCTTCCCCTCCCCCTCCCCCATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGATTGATAGGAAACTGTGAGGGGATTTTGGTTTGATTGTGTTCATGAATATGGTGGATCGAAGGAATCGATGAGGTGCGTAAGTTCCAAATTTTTGTTTCTGGGATGATGAACATTCATTCATCAATCCTTTGTCTCTGTTCATATGTTGGTGTCATAGTTATATGTTG

mRNA sequence

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Coding sequence (CDS)

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Protein sequence

MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTDPNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKSLDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP*

Homology

[Close]

BLAST of Csa1G222880 vs. TrEMBL
Match: A0A0A0LT75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222880 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.1e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of Csa1G222880 vs. TrEMBL
Match: A0A061GVT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038176 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.4e-139
Identity = 257/393 (65.39%), Postives = 324/393 (82.44%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  ED+PRV++VLEALKQASHELQ++P  +S   NS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSSKEDNPRVLKVLEALKQASHELQAHPTYKSANSNSSAIKALLELETESDSILSND 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+L TLS HLA+LK+ V+TL+++RGY  RSFLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLFTLSQHLADLKTHVETLKRTRGYGLRSFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           +++L++ LKEP  +E+EL++LLTQFE+R++QGFN ELQ+L+LKSK FS+L+S++C+PN S
Sbjct: 121 IESLIKGLKEPGKNEDELVRLLTQFEDRVSQGFNCELQNLVLKSKAFSVLQSVLCDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE +A+ +  ++RFNKDVFVGQ+ MG TIHAL++M S+HSLK+LC LI+  +SP V+
Sbjct: 181 KRIRESAAFCVAALIRFNKDVFVGQVNMGGTIHALLDMRSTHSLKVLCELIKFTKSPFVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EI  NG+IP+I++LL   DL ++VLA DCI+EIGYFGRK+  +A+L+  LI  LVELQRS
Sbjct: 241 EIVCNGEIPEILTLLETKDLDMKVLAFDCILEIGYFGRKEAGEALLKGGLIKNLVELQRS 300

Query: 301 ELGGDLIGLGKHTAE--ESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKR 360
           ELGGDLI +GK  AE  E  E      EKRFLE HPFASCVA+F VQLEVGEGLR+REKR
Sbjct: 301 ELGGDLIEMGKFEAENKEIEEKKREKREKRFLENHPFASCVARFAVQLEVGEGLRQREKR 360

Query: 361 AIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           A K EIL+RVR A +SDAEAATIIAEVLWGSSP
Sbjct: 361 AFKLEILERVRGASISDAEAATIIAEVLWGSSP 393

[Close]

BLAST of Csa1G222880 vs. TrEMBL
Match: A0A067G4V8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035696mg PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.2e-139
Identity = 265/405 (65.43%), Postives = 331/405 (81.73%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S    +PRV+ VLEALKQAS +LQ++P+  S EFNS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSED 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           P+LSTLS HLA+LK+LV TL KSRG  S RSFL RR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSIDE---NELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
            ++ L +ALK+   D    +EL+KLLTQFE+R++QGF+RELQDL+LKSKVFSLLE+I+CN
Sbjct: 121 HIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCN 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           P+ SK++RE SAY I  ++RFNKDVFVGQ+LMGPT+ AL+ M+S+HS K+LC LI+ I+S
Sbjct: 181 PSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIESNG+IPKIISLL+  DLQ+++LAMDCI+EIGYFGRK+ +DAMLEQ L+ +LVE
Sbjct: 241 PLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAEESREVTGSAG----------EKRFLEKHPFASCVAKFGVQL 360
           LQRSELGGDLI + +   +E  +    AG          E++FL++HPFASCVA+F VQL
Sbjct: 301 LQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQL 360

Query: 361 EVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EVGEGLR+REKRA+K EIL RVR+A  SDAEAATI+AEVLWGSSP
Sbjct: 361 EVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVLWGSSP 405

[Close]

BLAST of Csa1G222880 vs. TrEMBL
Match: U5G650_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06240g PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.2e-139
Identity = 259/392 (66.07%), Postives = 319/392 (81.38%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D+   E+  RV++VLEALKQASH+LQ++P P S E NSPA+KALLELE ESD  LS D
Sbjct: 2   MEDTPSKEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKD 61

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P LSTLS HLA+LKSL DTLQ+S G+  RSFLTRR +T S+S+VAGSIESEIQAWIDR+S
Sbjct: 62  PLLSTLSEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRES 121

Query: 121 LDTLVRALKEP-SIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNF 180
           +D L++ LK+P  I+E EL+ LL+QFE+R+ QGFNRELQDL+LKSK+F LLE I C+P+ 
Sbjct: 122 IDRLMKGLKDPLQIEEGELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSC 181

Query: 181 SKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLV 240
           S+ +RE  A+V+  ++RFNKDVFVGQ+LMG  IH +V MAS  S+K+L SLI+ I+SPLV
Sbjct: 182 SRKVREQCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLV 241

Query: 241 EEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQR 300
           +EIESNG+IPKIIS L+  DL +RV+ MDCI+EIGYFGRK+ ++AML + LI +LVELQR
Sbjct: 242 DEIESNGEIPKIISFLDYKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQR 301

Query: 301 SELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           S+LGGDLI +G    E+ R      GE RFLE HPFASCVA+F VQLEVGEGLR+RE+RA
Sbjct: 302 SKLGGDLIDIGMFDDEKER----GKGETRFLENHPFASCVARFAVQLEVGEGLRQRERRA 361

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
            K EILK VR ACVS+AEAATI+AEVLWGSSP
Sbjct: 362 FKQEILKTVRNACVSNAEAATIVAEVLWGSSP 389

[Close]

BLAST of Csa1G222880 vs. TrEMBL
Match: A0A067K215_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 5.4e-139
Identity = 258/396 (65.15%), Postives = 326/396 (82.32%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M++ S  E+  RV++VLEALKQASH+LQ +P P+S + NSPAIKALLELE ESD  LS D
Sbjct: 1   MENPSSKEEISRVLKVLEALKQASHDLQLHPTPKSTDSNSPAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLS HL +L++L+++LQ+SRGYS R+FL RR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSQHLTSLRTLIESLQESRGYSFRNFLNRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENE--LIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           +++L  ALKEP  +ENE  L+ LLTQFENR++QGFNRELQDL+LKSK+  +LE+I+C+PN
Sbjct: 121 IESLTAALKEPGKNENEEVLVSLLTQFENRVSQGFNRELQDLVLKSKILYILENIICDPN 180

Query: 181 ---FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIR 240
              +SK I+E   +V+  ++RFNKDVFVGQ+LMGP IHALV MAS  S+++LCSLI+LI+
Sbjct: 181 NNNWSKRIKEQCGFVVAALIRFNKDVFVGQVLMGPLIHALVSMASWKSIRVLCSLIKLIK 240

Query: 241 SPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLV 300
           SPLV+EIESNG+IPKII  L+  DLQIRVLAM+CI+EIGYFGRK+ ++AML++ LI +LV
Sbjct: 241 SPLVDEIESNGEIPKIICFLDYKDLQIRVLAMECILEIGYFGRKEAIEAMLKEGLIKKLV 300

Query: 301 ELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKR 360
           ELQR +LG DLI +     E+  E      EK+ LE+ PFA CVAKF VQLEVGEGLR+R
Sbjct: 301 ELQRLDLGSDLIDISNFDEEKESE---KIKEKKVLERFPFAGCVAKFAVQLEVGEGLRQR 360

Query: 361 EKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EKRA K EIL+RV++A VSDAEAATI+AEVLWGSSP
Sbjct: 361 EKRAFKQEILERVKEASVSDAEAATIVAEVLWGSSP 393

[Close]

BLAST of Csa1G222880 vs. NCBI nr
Match: gi|700210009|gb|KGN65105.1| (hypothetical protein Csa_1G222880 [Cucumis sativus])

HSP 1 Score: 756.1 bits (1951), Expect = 3.0e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of Csa1G222880 vs. NCBI nr
Match: gi|590578712|ref|XP_007013585.1| (Uncharacterized protein TCM_038176 [Theobroma cacao])

HSP 1 Score: 504.2 bits (1297), Expect = 2.0e-139
Identity = 257/393 (65.39%), Postives = 324/393 (82.44%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  ED+PRV++VLEALKQASHELQ++P  +S   NS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSSKEDNPRVLKVLEALKQASHELQAHPTYKSANSNSSAIKALLELETESDSILSND 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+L TLS HLA+LK+ V+TL+++RGY  RSFLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLFTLSQHLADLKTHVETLKRTRGYGLRSFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           +++L++ LKEP  +E+EL++LLTQFE+R++QGFN ELQ+L+LKSK FS+L+S++C+PN S
Sbjct: 121 IESLIKGLKEPGKNEDELVRLLTQFEDRVSQGFNCELQNLVLKSKAFSVLQSVLCDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE +A+ +  ++RFNKDVFVGQ+ MG TIHAL++M S+HSLK+LC LI+  +SP V+
Sbjct: 181 KRIRESAAFCVAALIRFNKDVFVGQVNMGGTIHALLDMRSTHSLKVLCELIKFTKSPFVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EI  NG+IP+I++LL   DL ++VLA DCI+EIGYFGRK+  +A+L+  LI  LVELQRS
Sbjct: 241 EIVCNGEIPEILTLLETKDLDMKVLAFDCILEIGYFGRKEAGEALLKGGLIKNLVELQRS 300

Query: 301 ELGGDLIGLGKHTAE--ESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKR 360
           ELGGDLI +GK  AE  E  E      EKRFLE HPFASCVA+F VQLEVGEGLR+REKR
Sbjct: 301 ELGGDLIEMGKFEAENKEIEEKKREKREKRFLENHPFASCVARFAVQLEVGEGLRQREKR 360

Query: 361 AIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           A K EIL+RVR A +SDAEAATIIAEVLWGSSP
Sbjct: 361 AFKLEILERVRGASISDAEAATIIAEVLWGSSP 393

[Close]

BLAST of Csa1G222880 vs. NCBI nr
Match: gi|641854661|gb|KDO73455.1| (hypothetical protein CISIN_1g035696mg [Citrus sinensis])

HSP 1 Score: 503.1 bits (1294), Expect = 4.5e-139
Identity = 265/405 (65.43%), Postives = 331/405 (81.73%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S    +PRV+ VLEALKQAS +LQ++P+  S EFNS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSED 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           P+LSTLS HLA+LK+LV TL KSRG  S RSFL RR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSIDE---NELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
            ++ L +ALK+   D    +EL+KLLTQFE+R++QGF+RELQDL+LKSKVFSLLE+I+CN
Sbjct: 121 HIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCN 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           P+ SK++RE SAY I  ++RFNKDVFVGQ+LMGPT+ AL+ M+S+HS K+LC LI+ I+S
Sbjct: 181 PSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIESNG+IPKIISLL+  DLQ+++LAMDCI+EIGYFGRK+ +DAMLEQ L+ +LVE
Sbjct: 241 PLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAEESREVTGSAG----------EKRFLEKHPFASCVAKFGVQL 360
           LQRSELGGDLI + +   +E  +    AG          E++FL++HPFASCVA+F VQL
Sbjct: 301 LQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQL 360

Query: 361 EVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EVGEGLR+REKRA+K EIL RVR+A  SDAEAATI+AEVLWGSSP
Sbjct: 361 EVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVLWGSSP 405

[Close]

BLAST of Csa1G222880 vs. NCBI nr
Match: gi|566174784|ref|XP_006381098.1| (hypothetical protein POPTR_0006s06240g [Populus trichocarpa])

HSP 1 Score: 503.1 bits (1294), Expect = 4.5e-139
Identity = 259/392 (66.07%), Postives = 319/392 (81.38%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D+   E+  RV++VLEALKQASH+LQ++P P S E NSPA+KALLELE ESD  LS D
Sbjct: 2   MEDTPSKEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKD 61

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P LSTLS HLA+LKSL DTLQ+S G+  RSFLTRR +T S+S+VAGSIESEIQAWIDR+S
Sbjct: 62  PLLSTLSEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRES 121

Query: 121 LDTLVRALKEP-SIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNF 180
           +D L++ LK+P  I+E EL+ LL+QFE+R+ QGFNRELQDL+LKSK+F LLE I C+P+ 
Sbjct: 122 IDRLMKGLKDPLQIEEGELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSC 181

Query: 181 SKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLV 240
           S+ +RE  A+V+  ++RFNKDVFVGQ+LMG  IH +V MAS  S+K+L SLI+ I+SPLV
Sbjct: 182 SRKVREQCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLV 241

Query: 241 EEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQR 300
           +EIESNG+IPKIIS L+  DL +RV+ MDCI+EIGYFGRK+ ++AML + LI +LVELQR
Sbjct: 242 DEIESNGEIPKIISFLDYKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQR 301

Query: 301 SELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           S+LGGDLI +G    E+ R      GE RFLE HPFASCVA+F VQLEVGEGLR+RE+RA
Sbjct: 302 SKLGGDLIDIGMFDDEKER----GKGETRFLENHPFASCVARFAVQLEVGEGLRQRERRA 361

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
            K EILK VR ACVS+AEAATI+AEVLWGSSP
Sbjct: 362 FKQEILKTVRNACVSNAEAATIVAEVLWGSSP 389

[Close]

BLAST of Csa1G222880 vs. NCBI nr
Match: gi|802666098|ref|XP_012081168.1| (PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas])

HSP 1 Score: 502.3 bits (1292), Expect = 7.7e-139
Identity = 258/396 (65.15%), Postives = 326/396 (82.32%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M++ S  E+  RV++VLEALKQASH+LQ +P P+S + NSPAIKALLELE ESD  LS D
Sbjct: 1   MENPSSKEEISRVLKVLEALKQASHDLQLHPTPKSTDSNSPAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLS HL +L++L+++LQ+SRGYS R+FL RR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSQHLTSLRTLIESLQESRGYSFRNFLNRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENE--LIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           +++L  ALKEP  +ENE  L+ LLTQFENR++QGFNRELQDL+LKSK+  +LE+I+C+PN
Sbjct: 121 IESLTAALKEPGKNENEEVLVSLLTQFENRVSQGFNRELQDLVLKSKILYILENIICDPN 180

Query: 181 ---FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIR 240
              +SK I+E   +V+  ++RFNKDVFVGQ+LMGP IHALV MAS  S+++LCSLI+LI+
Sbjct: 181 NNNWSKRIKEQCGFVVAALIRFNKDVFVGQVLMGPLIHALVSMASWKSIRVLCSLIKLIK 240

Query: 241 SPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLV 300
           SPLV+EIESNG+IPKII  L+  DLQIRVLAM+CI+EIGYFGRK+ ++AML++ LI +LV
Sbjct: 241 SPLVDEIESNGEIPKIICFLDYKDLQIRVLAMECILEIGYFGRKEAIEAMLKEGLIKKLV 300

Query: 301 ELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKR 360
           ELQR +LG DLI +     E+  E      EK+ LE+ PFA CVAKF VQLEVGEGLR+R
Sbjct: 301 ELQRLDLGSDLIDISNFDEEKESE---KIKEKKVLERFPFAGCVAKFAVQLEVGEGLRQR 360

Query: 361 EKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EKRA K EIL+RV++A VSDAEAATI+AEVLWGSSP
Sbjct: 361 EKRAFKQEILERVKEASVSDAEAATIVAEVLWGSSP 393

The following BLAST results are available for this feature:

BLAST of Csa1G222880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT75_CUCSA	2.1e-215	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222880 PE=4 SV=1	[more]
A0A061GVT8_THECC	1.4e-139	65.39	Uncharacterized protein OS=Theobroma cacao GN=TCM_038176 PE=4 SV=1	[more]
A0A067G4V8_CITSI	3.2e-139	65.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035696mg PE=4 SV=1	[more]
U5G650_POPTR	3.2e-139	66.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06240g PE=4 SV=1	[more]
A0A067K215_JATCU	5.4e-139	65.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1	[more]

BLAST of Csa1G222880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210009\|gb\|KGN65105.1\|	3.0e-215	100.00	hypothetical protein Csa_1G222880 [Cucumis sativus]	[more]
gi\|590578712\|ref\|XP_007013585.1\|	2.0e-139	65.39	Uncharacterized protein TCM_038176 [Theobroma cacao]	[more]
gi\|641854661\|gb\|KDO73455.1\|	4.5e-139	65.43	hypothetical protein CISIN_1g035696mg [Citrus sinensis]	[more]
gi\|566174784\|ref\|XP_006381098.1\|	4.5e-139	66.07	hypothetical protein POPTR_0006s06240g [Populus trichocarpa]	[more]
gi\|802666098\|ref\|XP_012081168.1\|	7.7e-139	65.15	PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU123061	cucumber EST collection version 3.0	transcribed_cluster
CU138485	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G222880.1	Csa1G222880.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU123061	CU123061	transcribed_cluster
CU138485	CU138485	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 94..301 score: 1.3E-10coord: 32..57 score: 1.3
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 33..54 score: 2.42E-14coord: 88..301 score: 2.42
None	No IPR available	PANTHER	PTHR35834	FAMILY NOT NAMED	coord: 3..391 score: 3.7E
None	No IPR available	PANTHER	PTHR35834:SF2	SUBFAMILY NOT NAMED	coord: 3..391 score: 3.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G222880	Cla012193	Watermelon (97103) v1	cuwmB097
Csa1G222880	MELO3C010295	Melon (DHL92) v3.5.1	cumeB047
Csa1G222880	ClCG06G011670	Watermelon (Charleston Gray)	cuwcgB084
Csa1G222880	Lsi06G010160	Bottle gourd (USVL1VR-Ls)	culsiB074
Csa1G222880	MELO3C010295.2	Melon (DHL92) v3.6.1	cumedB038
Csa1G222880	Cla97C06G120830	Watermelon (97103) v2	cuwmbB081
Csa1G222880	Bhi02G000767	Wax gourd	cuwgoB084
Csa1G222880	CSPI01G16510	Wild cucumber (PI 183967)	cpicuB000
Csa1G222880	Cucsa.249400	Cucumber (Gy14) v1	cgycuB357
Csa1G222880	CmaCh11G005150	Cucurbita maxima (Rimu)	cmacuB090
Csa1G222880	CmaCh10G005130	Cucurbita maxima (Rimu)	cmacuB052
Csa1G222880	CmoCh10G005490	Cucurbita moschata (Rifu)	cmocuB041
Csa1G222880	CmoCh11G005110	Cucurbita moschata (Rifu)	cmocuB078
Csa1G222880	Cp4.1LG18g05190	Cucurbita pepo (Zucchini)	cpecuB365
Csa1G222880	Cp4.1LG04g09170	Cucurbita pepo (Zucchini)	cpecuB657
Csa1G222880	Carg09950	Silver-seed gourd	carcuB0137

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G222880	Cucumber (Gy14) v2	cgybcuB009