Carg09950 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09950
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Armadillo-like helical
Location	Cucurbita_argyrosperma_scaffold_030 : 664451 .. 665647 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATTCTCCGAAGAAGGACGATAGTCCGCGAGTTGTTAGAGTTCTTGAAGCGCTCAAACAAGCTTCTCATGAGTTGCAAGCACATCCAAGTCCTCGCTCCGGGAAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAGCTCGAGGTTGAATCCGATAAAATTCTTTCCAGTGATCCGAATCTCTTGACTCTTGCTCAGCACCTTGGAAACCTAAAAGCCTTGGTGGAGACGCTTCAGAAGTGCAGAGGTTACGGCCTTAGGTCGTTCTTAACCCGCCGTTTCGCGACGAATTCGGTATCTCAAGTCGCCGGTTTAATCGAGGCGGAGATTCAAGCTTGGATTGACCGCGAGAGCTTGGAGAGTCTGGTTCGAGGTCTTAAAGAGCCTTCAGACGACGAGAACGAATTGATTAAGCTACTGGTTCAGTTCGAGAATCGACTCGCTCAAGGATTCAACCGCGAGCTACAGGATCTCATGCTCAAATCTAAGGTGTTTTCATTGCTCGAATCGATCGTTTGCGACTCTAATTTCTCGAAAACGATCCGAGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTCGGTCAAGTATAAATGGGACCGACAATTCACGCGCTAGTTCAAATGGCTTCCTCTCACTCATTAAAAGTCCTCTGTTCCTTAATCAGGCTGATTAGGTCTCCGCTTGTGGAGGAAATCGAGTCAAACGGCGACATACCAAAAATAATAAGCTTATTGAATTGCCATGACCTGCAAATTAGGGTTTTAGCCATGGATTGCATTATTGAAATAGGCTATTACGGCCGCAAAGAGACTGTAGATACTATGCTGGAAGAGGACTTGATCGACAGGCTTGTGGAATTGCAGAGGTCAGAATTGGGCGGCGACTTGATCGGATTGGGGAAACACACGGCGGAGGAGAGTAGAGAGGTAGCTGCCGGCGAAGTGGAGGGAAGAAGAGAAAGTAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCAAGCTGTGTGGCAAAATTTGCAGTGCAATTGGAGGTTGGAGAGGGGTTGAGGAAGAGGGAGAAGAGGGCCATTAAGCCTGAAATTTTGAGGAGAGTTCGAAAAGCTTGTGTTTCTGATGCTGAAGCGGCCACCATAATCGCCGAGGTTTTGTGGGGATCTAGTCCTTGA

mRNA sequence

ATGGATGATTCTCCGAAGAAGGACGATAGTCCGCGAGTTGTTAGAGTTCTTGAAGCGCTCAAACAAGCTTCTCATGAGTTGCAAGCACATCCAAGTCCTCGCTCCGGGAAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAGCTCGAGGTTGAATCCGATAAAATTCTTTCCAGTGATCCGAATCTCTTGACTCTTGCTCAGCACCTTGGAAACCTAAAAGCCTTGGTGGAGACGCTTCAGAAGTGCAGAGGTTACGGCCTTAGGTCGTTCTTAACCCGCCGTTTCGCGACGAATTCGGTATCTCAAGTCGCCGGTTTAATCGAGGCGGAGATTCAAGCTTGGATTGACCGCGAGAGCTTGGAGAGTCTGGTTCGAGGTCTTAAAGAGCCTTCAGACGACGAGAACGAATTGATTAAGCTACTGGTTCAGTTCGAGAATCGACTCGCTCAAGGATTCAACCGCGAGCTACAGGATCTCATGCTCAAATCTAAGGTGTTTTCATTGCTCGAATCGATCGTTTGCGACTCTAATTTCTCGAAAACGATCCGAGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTCGGTCAAGAAATCGAGTCAAACGGCGACATACCAAAAATAATAAGCTTATTGAATTGCCATGACCTGCAAATTAGGGTTTTAGCCATGGATTGCATTATTGAAATAGGCTATTACGGCCGCAAAGAGACTGTAGATACTATGCTGGAAGAGGACTTGATCGACAGGCTTGTGGAATTGCAGAGGTCAGAATTGGGCGGCGACTTGATCGGATTGGGGAAACACACGGCGGAGGAGAGTAGAGAGGTAGCTGCCGGCGAAGTGGAGGGAAGAAGAGAAAGTAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCAAGCTGTGTGGCAAAATTTGCAGTGCAATTGGAGGTTGGAGAGGGGTTGAGGAAGAGGGAGAAGAGGGCCATTAAGCCTGAAATTTTGAGGAGAGTTCGAAAAGCTTGTGTTTCTGATGCTGAAGCGGCCACCATAATCGCCGAGGTTTTGTGGGGATCTAGTCCTTGA

Coding sequence (CDS)

ATGGATGATTCTCCGAAGAAGGACGATAGTCCGCGAGTTGTTAGAGTTCTTGAAGCGCTCAAACAAGCTTCTCATGAGTTGCAAGCACATCCAAGTCCTCGCTCCGGGAAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAGCTCGAGGTTGAATCCGATAAAATTCTTTCCAGTGATCCGAATCTCTTGACTCTTGCTCAGCACCTTGGAAACCTAAAAGCCTTGGTGGAGACGCTTCAGAAGTGCAGAGGTTACGGCCTTAGGTCGTTCTTAACCCGCCGTTTCGCGACGAATTCGGTATCTCAAGTCGCCGGTTTAATCGAGGCGGAGATTCAAGCTTGGATTGACCGCGAGAGCTTGGAGAGTCTGGTTCGAGGTCTTAAAGAGCCTTCAGACGACGAGAACGAATTGATTAAGCTACTGGTTCAGTTCGAGAATCGACTCGCTCAAGGATTCAACCGCGAGCTACAGGATCTCATGCTCAAATCTAAGGTGTTTTCATTGCTCGAATCGATCGTTTGCGACTCTAATTTCTCGAAAACGATCCGAGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTCGGTCAAGAAATCGAGTCAAACGGCGACATACCAAAAATAATAAGCTTATTGAATTGCCATGACCTGCAAATTAGGGTTTTAGCCATGGATTGCATTATTGAAATAGGCTATTACGGCCGCAAAGAGACTGTAGATACTATGCTGGAAGAGGACTTGATCGACAGGCTTGTGGAATTGCAGAGGTCAGAATTGGGCGGCGACTTGATCGGATTGGGGAAACACACGGCGGAGGAGAGTAGAGAGGTAGCTGCCGGCGAAGTGGAGGGAAGAAGAGAAAGTAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCAAGCTGTGTGGCAAAATTTGCAGTGCAATTGGAGGTTGGAGAGGGGTTGAGGAAGAGGGAGAAGAGGGCCATTAAGCCTGAAATTTTGAGGAGAGTTCGAAAAGCTTGTGTTTCTGATGCTGAAGCGGCCACCATAATCGCCGAGGTTTTGTGGGGATCTAGTCCTTGA

Protein sequence

MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSDPNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRESLESLVRGLKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFSKTIREHSAYAIGAMVRFNKDVFVGQEIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRSELGGDLIGLGKHTAEESREVAAGEVEGRRESREKRFLESHPFASCVAKFAVQLEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP

Homology

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BLAST of Carg09950 vs. NCBI nr
Match: XP_022134648.1 (uncharacterized protein LOC111006872 [Momordica charantia])

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 317/401 (79.05%), Postives = 335/401 (83.54%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60
           MDDS  K+D+PRV+RVLEALKQ SHELQAHPSP S +F+SPAIKALLELEVESDKILSSD
Sbjct: 1   MDDS-SKEDTPRVLRVLEALKQVSHELQAHPSPGSDEFDSPAIKALLELEVESDKILSSD 60

Query: 61  PNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRES 120
           PNL TL+ HL NLK+LVETLQK RGYGLRSF TRRFATNSVSQVAG IE+EIQAWIDRES
Sbjct: 61  PNLSTLSHHLANLKSLVETLQKSRGYGLRSFFTRRFATNSVSQVAGSIESEIQAWIDRES 120

Query: 121 LESLVRGLKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFS 180
           LE+LVR LKEPS DENE IKLL QFENRL QGFNRELQDLMLKSKVFSLLESIVC  NFS
Sbjct: 121 LETLVRALKEPSIDENESIKLLTQFENRLDQGFNRELQDLMLKSKVFSLLESIVCSPNFS 180

Query: 181 KTIREHSAYAIGAMVRFNKDVFVGQ----------------------------------- 240
           KTIREHSAYAIGAMVRFNKDVFVGQ                                   
Sbjct: 181 KTIREHSAYAIGAMVRFNKDVFVGQVLTGPTIHALVQMASSHSLKVLCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCI+EIGY+GRKE VDTML+E LIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCQDLQIRVLAMDCIVEIGYFGRKEAVDTMLDEGLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVAAGEVEGR---RESREKRFLESHPFASCVAKFAVQLEVGE 360
           ELGGDLIGLG+ TAEE   VAAGEVEGR   RESREK+FLE HPFASCVA+F VQLEVGE
Sbjct: 301 ELGGDLIGLGRQTAEEGTGVAAGEVEGRREGRESREKKFLERHPFASCVARFTVQLEVGE 360

Query: 361 GLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           GLR+REKRAIKPEIL+RV KACVSDAEAATI+AEVLWGSSP
Sbjct: 361 GLRQREKRAIKPEILKRVTKACVSDAEAATIMAEVLWGSSP 400

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BLAST of Carg09950 vs. NCBI nr
Match: KGN65105.1 (hypothetical protein Csa_1G222880 [Cucumis sativus])

HSP 1 Score: 572.8 bits (1475), Expect = 8.4e-160
Identity = 310/398 (77.89%), Postives = 330/398 (82.91%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60
           MDDS K +DSPRVVRVLEALKQASHELQ++P+PRS +FNSPAIKALLELEVESDK LS+D
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRES 120
           PNL TL+ HL NLK+LV+TLQK RGY  RSFLTRRFATNSVSQVAG IE+EIQAWIDR+S
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LESLVRGLKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFS 180
           L++LVR LKEPS DENELIKLL QFENRLAQGFNRELQDLMLKSKVFSLLESIVC+ NFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYAIGAMVRFNKDVFVGQ----------------------------------- 240
           KTIREHSAY IG MVRFNKDVFVGQ                                   
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCI+EIGY+GRK+TVD MLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVAAGEVEGRRESREKRFLESHPFASCVAKFAVQLEVGEGLR 360
           ELGGDLIGLGKHTAEESREV          + EKRFLE HPFASCVAKF VQLEVGEGLR
Sbjct: 301 ELGGDLIGLGKHTAEESREVTG-------SAGEKRFLEKHPFASCVAKFGVQLEVGEGLR 360

Query: 361 KREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           KREKRAIK EIL+RVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

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BLAST of Carg09950 vs. NCBI nr
Match: XP_024925320.1 (uncharacterized protein LOC112490105 [Ziziphus jujuba])

HSP 1 Score: 471.9 bits (1213), Expect = 2.0e-129
Identity = 259/406 (63.79%), Postives = 312/406 (76.85%), Query Frame = 0


Query: 3   DSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSDPN 62
           D P K++ PRV++VLEALKQASHELQAHP     + NS AIKALLELE ESD ILS DPN
Sbjct: 2   DDPSKEEGPRVLKVLEALKQASHELQAHPRQDFDEPNSSAIKALLELETESDTILSKDPN 61

Query: 63  LLTLAQHLGNLKALVETLQKCRGY-GLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRESL 122
           L  L+QHL +LK LVET QKCRG+  +RSFLTRR +T+S+S+VAG IE EIQAWIDRES+
Sbjct: 62  LSILSQHLTSLKNLVETFQKCRGHLSIRSFLTRRVSTHSISRVAGSIENEIQAWIDRESV 121

Query: 123 ESLVRGLKEPSDD-ENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFS 182
           E+L   L+EP +D E E ++LL QFE+RLA+GFNRELQDL+LKSKVFSLLES +CD + S
Sbjct: 122 ENLTWVLREPGNDKEEETVRLLTQFEDRLAEGFNRELQDLILKSKVFSLLESTLCDPDSS 181

Query: 183 KTIREHSAYAIGAMVRFNKDVFVGQ----------------------------------- 242
           K IREHSA+AIGA++RFNKDVFVGQ                                   
Sbjct: 182 KRIREHSAFAIGALIRFNKDVFVGQVLMGPTTRALITMASPHSIKVLCFLIRSIKSPLVD 241

Query: 243 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 302
            IESNG+IP+II+ LNC D+Q+RV+AMDCI+EIGY+GRKE +D MLEE LI +LVELQRS
Sbjct: 242 VIESNGEIPRIIAFLNCQDVQVRVMAMDCILEIGYFGRKEAIDAMLEEGLIKKLVELQRS 301

Query: 303 ELGGDLIGLGKHTA-----EESREVAAGEVE---GRRESREKRFLESHPFASCVAKFAVQ 362
           ELGGDLI LG++++     +E+REV+A  VE    RRESRE+RFLESHPFASCVA+FAVQ
Sbjct: 302 ELGGDLIELGRYSSKNENEKENREVSADGVELGKKRRESRERRFLESHPFASCVARFAVQ 361

Query: 363 LEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           LEVGEGLR+RE+RA K +I+ RVR+A  SDAEAATI+AEVLWG+SP
Sbjct: 362 LEVGEGLRQRERRAFKQQIVVRVREASASDAEAATIVAEVLWGASP 407

[Close]

BLAST of Carg09950 vs. NCBI nr
Match: XP_024925321.1 (uncharacterized protein LOC112490106 [Ziziphus jujuba])

HSP 1 Score: 469.2 bits (1206), Expect = 1.3e-128
Identity = 258/406 (63.55%), Postives = 311/406 (76.60%), Query Frame = 0


Query: 3   DSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSDPN 62
           D P K++ PRV++VLEALKQASHELQAHP     + NS AIKALLELE ESD ILS DPN
Sbjct: 2   DDPSKEEGPRVLKVLEALKQASHELQAHPRQDFDEPNSSAIKALLELETESDTILSKDPN 61

Query: 63  LLTLAQHLGNLKALVETLQKCRGY-GLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRESL 122
           L  L+QHL +LK LVET QKCRG+  +RSFLTRR +T+S+S+VAG IE EIQAWIDRES+
Sbjct: 62  LSILSQHLTSLKNLVETFQKCRGHLSIRSFLTRRVSTHSISRVAGSIENEIQAWIDRESV 121

Query: 123 ESLVRGLKEPSDD-ENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFS 182
           E+L   L+EP ++ E E ++LL QFE+RLA+GFNRELQDL+LKSKVFSLLES +CD + S
Sbjct: 122 ENLTWVLREPGNNKEEETVRLLTQFEDRLAEGFNRELQDLILKSKVFSLLESTLCDPDSS 181

Query: 183 KTIREHSAYAIGAMVRFNKDVFVGQ----------------------------------- 242
           K IREHSA+AIGA +RFNKDVFVGQ                                   
Sbjct: 182 KRIREHSAFAIGAFIRFNKDVFVGQVLMGPTTRALITMASPHSIKVLCFLIRSIKSPLVD 241

Query: 243 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 302
            IESNG+IP+II+ LNC D+Q+RV+AMDCI+EIGY+GRKE +D MLEE LI +LVELQRS
Sbjct: 242 VIESNGEIPRIIAFLNCQDVQVRVMAMDCILEIGYFGRKEAIDAMLEEGLIKKLVELQRS 301

Query: 303 ELGGDLIGLGKHTA-----EESREVAAGEVE---GRRESREKRFLESHPFASCVAKFAVQ 362
           ELGGDLI LG++++     +E+REV+A  VE    RRESRE+RFLESHPFASCVA+FAVQ
Sbjct: 302 ELGGDLIELGRYSSKNENEKENREVSADGVELGKKRRESRERRFLESHPFASCVARFAVQ 361

Query: 363 LEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           LEVGEGLR+RE+RA K +I+ RVR+A  SDAEAATI+AEVLWG+SP
Sbjct: 362 LEVGEGLRQRERRAFKQQIVVRVREASASDAEAATIVAEVLWGASP 407

[Close]

BLAST of Carg09950 vs. NCBI nr
Match: POF19056.1 (hypothetical protein CFP56_42394 [Quercus suber])

HSP 1 Score: 459.5 bits (1181), Expect = 1.0e-125
Identity = 259/415 (62.41%), Postives = 306/415 (73.73%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFN-SPAIKALLELEVESDKILSS 60
           M+D   K DSPRV+ VLEALKQASHELQAHPSP S + N S AI ALLELE ESD ILS 
Sbjct: 1   MEDPSSKGDSPRVLEVLEALKQASHELQAHPSPNSDEVNSSSAINALLELETESDTILSK 60

Query: 61  DPNLLTLAQHLGNLKALVETLQKC-RGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDR 120
           DPNL  L+QHL NLKALVETL+   R + +RSFLTRR +T+S+S+VAG IE+EIQAWIDR
Sbjct: 61  DPNLSALSQHLSNLKALVETLKNSRRHHSIRSFLTRRVSTHSISRVAGSIESEIQAWIDR 120

Query: 121 ESLESLVRGLKEPS--DDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCD 180
           ES+E+L RGL+E    D E+ELIKLL Q ENR+++GFNRELQDL+LKSK+FS LE+I+CD
Sbjct: 121 ESIETLTRGLREQPKFDSEDELIKLLTQLENRVSEGFNRELQDLVLKSKLFSYLETILCD 180

Query: 181 SNFSKTIREHSAYAIGAMVRFNKDVFVGQ------------------------------- 240
            N SK IRE  A+AIGA++RFNKDVFVGQ                               
Sbjct: 181 PNCSKRIRERCAFAIGALIRFNKDVFVGQVLMGPTIGSLVTMGSSASIKVLCSLIRSIKS 240

Query: 241 ----EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVE 300
               EIES G+IPKII  L+  DL+I+VLAMDC++EIGY+GRKE ++ ML+E LI +LVE
Sbjct: 241 PLVDEIESLGNIPKIIMFLDSQDLEIKVLAMDCVLEIGYFGRKEAIEAMLKEGLIKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTA-------EESREVAAGE------VEGRRESREKRFLESHPFA 360
           LQRSELGGDLI +G++         E +  V          VEG+RESREKRFLE HPFA
Sbjct: 301 LQRSELGGDLIDMGRNGGTIDNVKFENNEGVGXXXXXXXXGVEGKRESREKRFLEMHPFA 360

Query: 361 SCVAKFAVQLEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           +CVA+FAVQLEVGEGLR+RE+RA K EIL RVR+ACVSDAEAATIIAEVLWGSSP
Sbjct: 361 NCVARFAVQLEVGEGLRQRERRAFKQEILARVREACVSDAEAATIIAEVLWGSSP 415

[Close]

BLAST of Carg09950 vs. TrEMBL
Match: tr|A0A0A0LT75|A0A0A0LT75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 5.5e-160
Identity = 310/398 (77.89%), Postives = 330/398 (82.91%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60
           MDDS K +DSPRVVRVLEALKQASHELQ++P+PRS +FNSPAIKALLELEVESDK LS+D
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRES 120
           PNL TL+ HL NLK+LV+TLQK RGY  RSFLTRRFATNSVSQVAG IE+EIQAWIDR+S
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LESLVRGLKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNFS 180
           L++LVR LKEPS DENELIKLL QFENRLAQGFNRELQDLMLKSKVFSLLESIVC+ NFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYAIGAMVRFNKDVFVGQ----------------------------------- 240
           KTIREHSAY IG MVRFNKDVFVGQ                                   
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCI+EIGY+GRK+TVD MLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVAAGEVEGRRESREKRFLESHPFASCVAKFAVQLEVGEGLR 360
           ELGGDLIGLGKHTAEESREV          + EKRFLE HPFASCVAKF VQLEVGEGLR
Sbjct: 301 ELGGDLIGLGKHTAEESREVTG-------SAGEKRFLEKHPFASCVAKFGVQLEVGEGLR 360

Query: 361 KREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           KREKRAIK EIL+RVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of Carg09950 vs. TrEMBL
Match: tr|A0A2P4MNE4|A0A2P4MNE4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42394 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 6.8e-126
Identity = 259/415 (62.41%), Postives = 306/415 (73.73%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFN-SPAIKALLELEVESDKILSS 60
           M+D   K DSPRV+ VLEALKQASHELQAHPSP S + N S AI ALLELE ESD ILS 
Sbjct: 1   MEDPSSKGDSPRVLEVLEALKQASHELQAHPSPNSDEVNSSSAINALLELETESDTILSK 60

Query: 61  DPNLLTLAQHLGNLKALVETLQKC-RGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDR 120
           DPNL  L+QHL NLKALVETL+   R + +RSFLTRR +T+S+S+VAG IE+EIQAWIDR
Sbjct: 61  DPNLSALSQHLSNLKALVETLKNSRRHHSIRSFLTRRVSTHSISRVAGSIESEIQAWIDR 120

Query: 121 ESLESLVRGLKEPS--DDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCD 180
           ES+E+L RGL+E    D E+ELIKLL Q ENR+++GFNRELQDL+LKSK+FS LE+I+CD
Sbjct: 121 ESIETLTRGLREQPKFDSEDELIKLLTQLENRVSEGFNRELQDLVLKSKLFSYLETILCD 180

Query: 181 SNFSKTIREHSAYAIGAMVRFNKDVFVGQ------------------------------- 240
            N SK IRE  A+AIGA++RFNKDVFVGQ                               
Sbjct: 181 PNCSKRIRERCAFAIGALIRFNKDVFVGQVLMGPTIGSLVTMGSSASIKVLCSLIRSIKS 240

Query: 241 ----EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVE 300
               EIES G+IPKII  L+  DL+I+VLAMDC++EIGY+GRKE ++ ML+E LI +LVE
Sbjct: 241 PLVDEIESLGNIPKIIMFLDSQDLEIKVLAMDCVLEIGYFGRKEAIEAMLKEGLIKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTA-------EESREVAAGE------VEGRRESREKRFLESHPFA 360
           LQRSELGGDLI +G++         E +  V          VEG+RESREKRFLE HPFA
Sbjct: 301 LQRSELGGDLIDMGRNGGTIDNVKFENNEGVGXXXXXXXXGVEGKRESREKRFLEMHPFA 360

Query: 361 SCVAKFAVQLEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           +CVA+FAVQLEVGEGLR+RE+RA K EIL RVR+ACVSDAEAATIIAEVLWGSSP
Sbjct: 361 NCVARFAVQLEVGEGLRQRERRAFKQEILARVREACVSDAEAATIIAEVLWGSSP 415

[Close]

BLAST of Carg09950 vs. TrEMBL
Match: tr|A0A2P4MPD4|A0A2P4MPD4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_14767 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.5e-125
Identity = 258/415 (62.17%), Postives = 306/415 (73.73%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFN-SPAIKALLELEVESDKILSS 60
           M+D   K DSPRV+ VLEALKQASHELQAHPSP S + N S AI ALLELE ESD ILS 
Sbjct: 1   MEDPSSKGDSPRVLEVLEALKQASHELQAHPSPNSDEVNSSSAINALLELETESDTILSK 60

Query: 61  DPNLLTLAQHLGNLKALVETLQKC-RGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDR 120
           DPNL  L+QHL NLKALVETL+   R + +RSFLTRR +T+S+S+VAG IE+EIQAWIDR
Sbjct: 61  DPNLSALSQHLSNLKALVETLKNSRRHHSIRSFLTRRVSTHSISRVAGSIESEIQAWIDR 120

Query: 121 ESLESLVRGLKEPS--DDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCD 180
           ES+E+L RGL+E    D E+ELIKLL Q ENR+++GFNRELQDL+LKSK+FS LE+I+CD
Sbjct: 121 ESIETLTRGLREQPKFDSEDELIKLLTQLENRVSEGFNRELQDLVLKSKLFSYLETILCD 180

Query: 181 SNFSKTIREHSAYAIGAMVRFNKDVFVGQ------------------------------- 240
            N SK +RE  A+AIGA++RFNKDVFVGQ                               
Sbjct: 181 PNCSKRMRERCAFAIGALIRFNKDVFVGQVLMGPTIGSLVTMGSSASIKVLCSLIRSIKS 240

Query: 241 ----EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVE 300
               EIES G+IPKII  L+  DL+I+VLAMDC++EIGY+GRKE ++ ML+E LI +LVE
Sbjct: 241 PLVDEIESLGNIPKIIMFLDSQDLEIKVLAMDCVLEIGYFGRKEAIEAMLKEGLIKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTA-------EESREVAAGE------VEGRRESREKRFLESHPFA 360
           LQRSELGGDLI +G++         E +  V          VEG+RESREKRFLE HPFA
Sbjct: 301 LQRSELGGDLIDMGRNGGTIDNVKFENNEGVGXXXXXXXXGVEGKRESREKRFLEMHPFA 360

Query: 361 SCVAKFAVQLEVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           +CVA+FAVQLEVGEGLR+RE+RA K EIL RVR+ACVSDAEAATIIAEVLWGSSP
Sbjct: 361 NCVARFAVQLEVGEGLRQRERRAFKQEILARVREACVSDAEAATIIAEVLWGSSP 415

[Close]

BLAST of Carg09950 vs. TrEMBL
Match: tr|A0A2P2NGK0|A0A2P2NGK0_RHIMU (Uncharacterized protein MANES_06G045500 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 4.9e-124
Identity = 244/399 (61.15%), Postives = 295/399 (73.93%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60
           M++   K++  RV+ VLEALKQAS ELQAHPSP SG+ NSPAIKALLELE ESD ILS D
Sbjct: 1   MEEPSSKEEISRVLEVLEALKQASQELQAHPSPESGQSNSPAIKALLELETESDTILSKD 60

Query: 61  PNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRES 120
           P+L +L+QHL +LK+LV+TLQ  RG  L +FLTRR +T+S+S+VAG IE+EIQAWIDRES
Sbjct: 61  PHLSSLSQHLADLKSLVDTLQNSRGLSLLNFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LESLVRG-LKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCDSNF 180
           +E+L +  LKEP  DE EL+ LL QFE R++QGFNRELQDL+LK K+F+ +E I+CD + 
Sbjct: 121 VENLAKALLKEPVQDEEELVGLLEQFEKRVSQGFNRELQDLVLKFKIFATVERILCDPSC 180

Query: 181 SKTIREHSAYAIGAMVRFNKDVFVGQ---------------------------------- 240
            K +REH A+ I A++RFNKDVFVGQ                                  
Sbjct: 181 LKKVREHCAFVIAALIRFNKDVFVGQVLMGPLIHALLSMASCKSMKVLCLLIKSIKSPFV 240

Query: 241 -EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQR 300
            EIESNG+IPKII  L+  DLQ RVL MDCI+EIGY+GRKE ++ ML+E LI +LVELQR
Sbjct: 241 DEIESNGEIPKIIGFLDFKDLQFRVLTMDCILEIGYFGRKEAIEAMLKEGLIKKLVELQR 300

Query: 301 SELGGDLIGLGKHTAEESREVAAGEVEGRRESREKRFLESHPFASCVAKFAVQLEVGEGL 360
           SELGGDLI  G+   +E+       VEG++ESREK FL SHPFASCVA+FAVQLEVGEGL
Sbjct: 301 SELGGDLIDKGRFDEKENHNSGGDGVEGKKESREKSFLVSHPFASCVARFAVQLEVGEGL 360

Query: 361 RKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           R+REKRA K EIL RVR+A VSDAE ATI+AEVLWGSSP
Sbjct: 361 RQREKRAFKQEILERVREASVSDAETATIVAEVLWGSSP 399

[Close]

BLAST of Carg09950 vs. TrEMBL
Match: tr|A0A067G4V8|A0A067G4V8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035696mg PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 6.6e-121
Identity = 244/405 (60.25%), Postives = 303/405 (74.81%), Query Frame = 0


Query: 1   MDDSPKKDDSPRVVRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60
           M+D   +  +PRV+ VLEALKQAS +LQAHPS  S +FNS AIKALLELE ESD +LS D
Sbjct: 1   MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSED 60

Query: 61  PNLLTLAQHLGNLKALVETLQKCRG-YGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRE 120
           P+L TL+QHL +LK LV+TL K RG   LRSFL RR +T+S+S+VAG IE EIQAWIDRE
Sbjct: 61  PHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDRE 120

Query: 121 SLESLVRGLKEPSDD---ENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSLLESIVCD 180
            +E L + LK+   D    +EL+KLL QFE+R++QGF+RELQDL+LKSKVFSLLE+I+C+
Sbjct: 121 HIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCN 180

Query: 181 SNFSKTIREHSAYAIGAMVRFNKDVFVGQ------------------------------- 240
            + SK++RE SAY+I +++RFNKDVFVGQ                               
Sbjct: 181 PSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKS 240

Query: 241 ----EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVE 300
               EIESNG+IPKIISLL+  DLQ+++LAMDCI+EIGY+GRKE +D MLE+ L+ +LVE
Sbjct: 241 PLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAEESRE---VAAGEVEGRRESREKRFLESHPFASCVAKFAVQL 360
           LQRSELGGDLI + +   +E  +    A G VE +RESRE++FL+ HPFASCVA+FAVQL
Sbjct: 301 LQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQL 360

Query: 361 EVGEGLRKREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 364
           EVGEGLR+REKRA+K EIL RVR+A  SDAEAATI+AEVLWGSSP
Sbjct: 361 EVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVLWGSSP 405

The following BLAST results are available for this feature:

BLAST of Carg09950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134648.1	1.1e-162	79.05	uncharacterized protein LOC111006872 [Momordica charantia]	[more]
KGN65105.1	8.4e-160	77.89	hypothetical protein Csa_1G222880 [Cucumis sativus]	[more]
XP_024925320.1	2.0e-129	63.79	uncharacterized protein LOC112490105 [Ziziphus jujuba]	[more]
XP_024925321.1	1.3e-128	63.55	uncharacterized protein LOC112490106 [Ziziphus jujuba]	[more]
POF19056.1	1.0e-125	62.41	hypothetical protein CFP56_42394 [Quercus suber]	[more]

BLAST of Carg09950 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg09950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09950 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT75\|A0A0A0LT75_CUCSA	5.5e-160	77.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1	[more]
tr\|A0A2P4MNE4\|A0A2P4MNE4_QUESU	6.8e-126	62.41	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42394 PE=4 SV=1	[more]
tr\|A0A2P4MPD4\|A0A2P4MPD4_QUESU	1.5e-125	62.17	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_14767 PE=4 SV=1	[more]
tr\|A0A2P2NGK0\|A0A2P2NGK0_RHIMU	4.9e-124	61.15	Uncharacterized protein MANES_06G045500 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]
tr\|A0A067G4V8\|A0A067G4V8_CITSI	6.6e-121	60.25	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035696mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09950-RA	Carg09950-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 9..287 e-value: 5.7E-12 score: 47.0
None	No IPR available	PANTHER	PTHR35834	FAMILY NOT NAMED	coord: 206..363 coord: 3..205
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 76..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09950	Cla012193	Watermelon (97103) v1	carwmB0126
Carg09950	Csa1G222880	Cucumber (Chinese Long) v2	carcuB0137
Carg09950	MELO3C010295	Melon (DHL92) v3.5.1	carmeB0131
Carg09950	ClCG06G011670	Watermelon (Charleston Gray)	carwcgB0125
Carg09950	CSPI01G16510	Wild cucumber (PI 183967)	carcpiB0141
Carg09950	Cucsa.249400	Cucumber (Gy14) v1	carcgyB0158
Carg09950	CmaCh11G005150	Cucurbita maxima (Rimu)	carcmaB0169
Carg09950	CmaCh10G005130	Cucurbita maxima (Rimu)	carcmaB0166
Carg09950	CmoCh10G005490	Cucurbita moschata (Rifu)	carcmoB0172
Carg09950	CmoCh11G005110	Cucurbita moschata (Rifu)	carcmoB0175
Carg09950	Lsi06G010160	Bottle gourd (USVL1VR-Ls)	carlsiB115
Carg09950	Cp4.1LG04g09170	Cucurbita pepo (Zucchini)	carcpeB0186
Carg09950	Cp4.1LG18g05190	Cucurbita pepo (Zucchini)	carcpeB0185
Carg09950	MELO3C010295.2	Melon (DHL92) v3.6.1	carmedB0135
Carg09950	CsaV3_1G027980	Cucumber (Chinese Long) v3	carcucB0142
Carg09950	Cla97C06G120830	Watermelon (97103) v2	carwmbB0133
Carg09950	Bhi02G000767	Wax gourd	carwgoB0165

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09950	Silver-seed gourd	carcarB154
Carg09950	Cucumber (Gy14) v2	carcgybB0132
Carg09950	Cucurbita maxima (Rimu)	carcmaB0165
Carg09950	Cucurbita pepo (Zucchini)	carcpeB0181
Carg09950	Wild cucumber (PI 183967)	carcpiB0138
Carg09950	Cucumber (Chinese Long) v2	carcuB0133
Carg09950	Bottle gourd (USVL1VR-Ls)	carlsiB118
Carg09950	Melon (DHL92) v3.5.1	carmeB0133
Carg09950	Watermelon (97103) v2	carwmbB0132
Carg09950	Watermelon (97103) v2	carwmbB0136