Csa1G222880.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G222880.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein GmTDF-5; contains IPR016024 (Armadillo-type fold)
Location	Chr1 : 11753457 .. 11754886 (-)
Sequence length	1176

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTATGTAGAACCGAGAGCGCCACATCGTTCTCTCTCGAACAACCCCTGCTCCAGAATTCAAACTCCTTCCCCTCCCCCTCCCCCATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGATTGATAGGAAACTGTGAGGGGATTTTGGTTTGATTGTGTTCATGAATATGGTGGATCGAAGGAATCGATGAGGTGCGTAAGTTCCAAATTTTTGTTTCTGGGATGATGAACATTCATTCATCAATCCTTTGTCTCTGTTCATATGTTGGTGTCATAGTTATATGTTG

mRNA sequence

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Coding sequence (CDS)

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Protein sequence

MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTDPNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKSLDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP*

Homology

[Close]

BLAST of Csa1G222880.1 vs. TrEMBL
Match: A0A0A0LT75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222880 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.1e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of Csa1G222880.1 vs. TrEMBL
Match: A0A061GVT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038176 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.4e-139
Identity = 257/393 (65.39%), Postives = 324/393 (82.44%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  ED+PRV++VLEALKQASHELQ++P  +S   NS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSSKEDNPRVLKVLEALKQASHELQAHPTYKSANSNSSAIKALLELETESDSILSND 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+L TLS HLA+LK+ V+TL+++RGY  RSFLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLFTLSQHLADLKTHVETLKRTRGYGLRSFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           +++L++ LKEP  +E+EL++LLTQFE+R++QGFN ELQ+L+LKSK FS+L+S++C+PN S
Sbjct: 121 IESLIKGLKEPGKNEDELVRLLTQFEDRVSQGFNCELQNLVLKSKAFSVLQSVLCDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE +A+ +  ++RFNKDVFVGQ+ MG TIHAL++M S+HSLK+LC LI+  +SP V+
Sbjct: 181 KRIRESAAFCVAALIRFNKDVFVGQVNMGGTIHALLDMRSTHSLKVLCELIKFTKSPFVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EI  NG+IP+I++LL   DL ++VLA DCI+EIGYFGRK+  +A+L+  LI  LVELQRS
Sbjct: 241 EIVCNGEIPEILTLLETKDLDMKVLAFDCILEIGYFGRKEAGEALLKGGLIKNLVELQRS 300

Query: 301 ELGGDLIGLGKHTAE--ESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKR 360
           ELGGDLI +GK  AE  E  E      EKRFLE HPFASCVA+F VQLEVGEGLR+REKR
Sbjct: 301 ELGGDLIEMGKFEAENKEIEEKKREKREKRFLENHPFASCVARFAVQLEVGEGLRQREKR 360

Query: 361 AIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           A K EIL+RVR A +SDAEAATIIAEVLWGSSP
Sbjct: 361 AFKLEILERVRGASISDAEAATIIAEVLWGSSP 393

[Close]

BLAST of Csa1G222880.1 vs. TrEMBL
Match: A0A067G4V8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035696mg PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.2e-139
Identity = 265/405 (65.43%), Postives = 331/405 (81.73%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S    +PRV+ VLEALKQAS +LQ++P+  S EFNS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSED 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           P+LSTLS HLA+LK+LV TL KSRG  S RSFL RR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSIDE---NELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
            ++ L +ALK+   D    +EL+KLLTQFE+R++QGF+RELQDL+LKSKVFSLLE+I+CN
Sbjct: 121 HIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCN 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           P+ SK++RE SAY I  ++RFNKDVFVGQ+LMGPT+ AL+ M+S+HS K+LC LI+ I+S
Sbjct: 181 PSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIESNG+IPKIISLL+  DLQ+++LAMDCI+EIGYFGRK+ +DAMLEQ L+ +LVE
Sbjct: 241 PLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAEESREVTGSAG----------EKRFLEKHPFASCVAKFGVQL 360
           LQRSELGGDLI + +   +E  +    AG          E++FL++HPFASCVA+F VQL
Sbjct: 301 LQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQL 360

Query: 361 EVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EVGEGLR+REKRA+K EIL RVR+A  SDAEAATI+AEVLWGSSP
Sbjct: 361 EVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVLWGSSP 405

[Close]

BLAST of Csa1G222880.1 vs. TrEMBL
Match: U5G650_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06240g PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.2e-139
Identity = 259/392 (66.07%), Postives = 319/392 (81.38%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D+   E+  RV++VLEALKQASH+LQ++P P S E NSPA+KALLELE ESD  LS D
Sbjct: 2   MEDTPSKEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKD 61

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P LSTLS HLA+LKSL DTLQ+S G+  RSFLTRR +T S+S+VAGSIESEIQAWIDR+S
Sbjct: 62  PLLSTLSEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRES 121

Query: 121 LDTLVRALKEP-SIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNF 180
           +D L++ LK+P  I+E EL+ LL+QFE+R+ QGFNRELQDL+LKSK+F LLE I C+P+ 
Sbjct: 122 IDRLMKGLKDPLQIEEGELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSC 181

Query: 181 SKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLV 240
           S+ +RE  A+V+  ++RFNKDVFVGQ+LMG  IH +V MAS  S+K+L SLI+ I+SPLV
Sbjct: 182 SRKVREQCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLV 241

Query: 241 EEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQR 300
           +EIESNG+IPKIIS L+  DL +RV+ MDCI+EIGYFGRK+ ++AML + LI +LVELQR
Sbjct: 242 DEIESNGEIPKIISFLDYKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQR 301

Query: 301 SELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           S+LGGDLI +G    E+ R      GE RFLE HPFASCVA+F VQLEVGEGLR+RE+RA
Sbjct: 302 SKLGGDLIDIGMFDDEKER----GKGETRFLENHPFASCVARFAVQLEVGEGLRQRERRA 361

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
            K EILK VR ACVS+AEAATI+AEVLWGSSP
Sbjct: 362 FKQEILKTVRNACVSNAEAATIVAEVLWGSSP 389

[Close]

BLAST of Csa1G222880.1 vs. TrEMBL
Match: A0A067K215_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 5.4e-139
Identity = 258/396 (65.15%), Postives = 326/396 (82.32%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M++ S  E+  RV++VLEALKQASH+LQ +P P+S + NSPAIKALLELE ESD  LS D
Sbjct: 1   MENPSSKEEISRVLKVLEALKQASHDLQLHPTPKSTDSNSPAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLS HL +L++L+++LQ+SRGYS R+FL RR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSQHLTSLRTLIESLQESRGYSFRNFLNRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENE--LIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           +++L  ALKEP  +ENE  L+ LLTQFENR++QGFNRELQDL+LKSK+  +LE+I+C+PN
Sbjct: 121 IESLTAALKEPGKNENEEVLVSLLTQFENRVSQGFNRELQDLVLKSKILYILENIICDPN 180

Query: 181 ---FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIR 240
              +SK I+E   +V+  ++RFNKDVFVGQ+LMGP IHALV MAS  S+++LCSLI+LI+
Sbjct: 181 NNNWSKRIKEQCGFVVAALIRFNKDVFVGQVLMGPLIHALVSMASWKSIRVLCSLIKLIK 240

Query: 241 SPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLV 300
           SPLV+EIESNG+IPKII  L+  DLQIRVLAM+CI+EIGYFGRK+ ++AML++ LI +LV
Sbjct: 241 SPLVDEIESNGEIPKIICFLDYKDLQIRVLAMECILEIGYFGRKEAIEAMLKEGLIKKLV 300

Query: 301 ELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKR 360
           ELQR +LG DLI +     E+  E      EK+ LE+ PFA CVAKF VQLEVGEGLR+R
Sbjct: 301 ELQRLDLGSDLIDISNFDEEKESE---KIKEKKVLERFPFAGCVAKFAVQLEVGEGLRQR 360

Query: 361 EKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EKRA K EIL+RV++A VSDAEAATI+AEVLWGSSP
Sbjct: 361 EKRAFKQEILERVKEASVSDAEAATIVAEVLWGSSP 393

[Close]

BLAST of Csa1G222880.1 vs. NCBI nr
Match: gi|700210009|gb|KGN65105.1| (hypothetical protein Csa_1G222880 [Cucumis sativus])

HSP 1 Score: 756.1 bits (1951), Expect = 3.0e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of Csa1G222880.1 vs. NCBI nr
Match: gi|590578712|ref|XP_007013585.1| (Uncharacterized protein TCM_038176 [Theobroma cacao])

HSP 1 Score: 504.2 bits (1297), Expect = 2.0e-139
Identity = 257/393 (65.39%), Postives = 324/393 (82.44%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  ED+PRV++VLEALKQASHELQ++P  +S   NS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSSKEDNPRVLKVLEALKQASHELQAHPTYKSANSNSSAIKALLELETESDSILSND 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+L TLS HLA+LK+ V+TL+++RGY  RSFLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLFTLSQHLADLKTHVETLKRTRGYGLRSFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           +++L++ LKEP  +E+EL++LLTQFE+R++QGFN ELQ+L+LKSK FS+L+S++C+PN S
Sbjct: 121 IESLIKGLKEPGKNEDELVRLLTQFEDRVSQGFNCELQNLVLKSKAFSVLQSVLCDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE +A+ +  ++RFNKDVFVGQ+ MG TIHAL++M S+HSLK+LC LI+  +SP V+
Sbjct: 181 KRIRESAAFCVAALIRFNKDVFVGQVNMGGTIHALLDMRSTHSLKVLCELIKFTKSPFVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EI  NG+IP+I++LL   DL ++VLA DCI+EIGYFGRK+  +A+L+  LI  LVELQRS
Sbjct: 241 EIVCNGEIPEILTLLETKDLDMKVLAFDCILEIGYFGRKEAGEALLKGGLIKNLVELQRS 300

Query: 301 ELGGDLIGLGKHTAE--ESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKR 360
           ELGGDLI +GK  AE  E  E      EKRFLE HPFASCVA+F VQLEVGEGLR+REKR
Sbjct: 301 ELGGDLIEMGKFEAENKEIEEKKREKREKRFLENHPFASCVARFAVQLEVGEGLRQREKR 360

Query: 361 AIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           A K EIL+RVR A +SDAEAATIIAEVLWGSSP
Sbjct: 361 AFKLEILERVRGASISDAEAATIIAEVLWGSSP 393

[Close]

BLAST of Csa1G222880.1 vs. NCBI nr
Match: gi|641854661|gb|KDO73455.1| (hypothetical protein CISIN_1g035696mg [Citrus sinensis])

HSP 1 Score: 503.1 bits (1294), Expect = 4.5e-139
Identity = 265/405 (65.43%), Postives = 331/405 (81.73%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S    +PRV+ VLEALKQAS +LQ++P+  S EFNS AIKALLELE ESD  LS D
Sbjct: 1   MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSED 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           P+LSTLS HLA+LK+LV TL KSRG  S RSFL RR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSIDE---NELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
            ++ L +ALK+   D    +EL+KLLTQFE+R++QGF+RELQDL+LKSKVFSLLE+I+CN
Sbjct: 121 HIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCN 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           P+ SK++RE SAY I  ++RFNKDVFVGQ+LMGPT+ AL+ M+S+HS K+LC LI+ I+S
Sbjct: 181 PSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIESNG+IPKIISLL+  DLQ+++LAMDCI+EIGYFGRK+ +DAMLEQ L+ +LVE
Sbjct: 241 PLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAEESREVTGSAG----------EKRFLEKHPFASCVAKFGVQL 360
           LQRSELGGDLI + +   +E  +    AG          E++FL++HPFASCVA+F VQL
Sbjct: 301 LQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQL 360

Query: 361 EVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EVGEGLR+REKRA+K EIL RVR+A  SDAEAATI+AEVLWGSSP
Sbjct: 361 EVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVLWGSSP 405

[Close]

BLAST of Csa1G222880.1 vs. NCBI nr
Match: gi|566174784|ref|XP_006381098.1| (hypothetical protein POPTR_0006s06240g [Populus trichocarpa])

HSP 1 Score: 503.1 bits (1294), Expect = 4.5e-139
Identity = 259/392 (66.07%), Postives = 319/392 (81.38%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D+   E+  RV++VLEALKQASH+LQ++P P S E NSPA+KALLELE ESD  LS D
Sbjct: 2   MEDTPSKEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKD 61

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P LSTLS HLA+LKSL DTLQ+S G+  RSFLTRR +T S+S+VAGSIESEIQAWIDR+S
Sbjct: 62  PLLSTLSEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRES 121

Query: 121 LDTLVRALKEP-SIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNF 180
           +D L++ LK+P  I+E EL+ LL+QFE+R+ QGFNRELQDL+LKSK+F LLE I C+P+ 
Sbjct: 122 IDRLMKGLKDPLQIEEGELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSC 181

Query: 181 SKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLV 240
           S+ +RE  A+V+  ++RFNKDVFVGQ+LMG  IH +V MAS  S+K+L SLI+ I+SPLV
Sbjct: 182 SRKVREQCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLV 241

Query: 241 EEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQR 300
           +EIESNG+IPKIIS L+  DL +RV+ MDCI+EIGYFGRK+ ++AML + LI +LVELQR
Sbjct: 242 DEIESNGEIPKIISFLDYKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQR 301

Query: 301 SELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           S+LGGDLI +G    E+ R      GE RFLE HPFASCVA+F VQLEVGEGLR+RE+RA
Sbjct: 302 SKLGGDLIDIGMFDDEKER----GKGETRFLENHPFASCVARFAVQLEVGEGLRQRERRA 361

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
            K EILK VR ACVS+AEAATI+AEVLWGSSP
Sbjct: 362 FKQEILKTVRNACVSNAEAATIVAEVLWGSSP 389

[Close]

BLAST of Csa1G222880.1 vs. NCBI nr
Match: gi|802666098|ref|XP_012081168.1| (PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas])

HSP 1 Score: 502.3 bits (1292), Expect = 7.7e-139
Identity = 258/396 (65.15%), Postives = 326/396 (82.32%), Query Frame = 1


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M++ S  E+  RV++VLEALKQASH+LQ +P P+S + NSPAIKALLELE ESD  LS D
Sbjct: 1   MENPSSKEEISRVLKVLEALKQASHDLQLHPTPKSTDSNSPAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLS HL +L++L+++LQ+SRGYS R+FL RR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSQHLTSLRTLIESLQESRGYSFRNFLNRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENE--LIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           +++L  ALKEP  +ENE  L+ LLTQFENR++QGFNRELQDL+LKSK+  +LE+I+C+PN
Sbjct: 121 IESLTAALKEPGKNENEEVLVSLLTQFENRVSQGFNRELQDLVLKSKILYILENIICDPN 180

Query: 181 ---FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIR 240
              +SK I+E   +V+  ++RFNKDVFVGQ+LMGP IHALV MAS  S+++LCSLI+LI+
Sbjct: 181 NNNWSKRIKEQCGFVVAALIRFNKDVFVGQVLMGPLIHALVSMASWKSIRVLCSLIKLIK 240

Query: 241 SPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLV 300
           SPLV+EIESNG+IPKII  L+  DLQIRVLAM+CI+EIGYFGRK+ ++AML++ LI +LV
Sbjct: 241 SPLVDEIESNGEIPKIICFLDYKDLQIRVLAMECILEIGYFGRKEAIEAMLKEGLIKKLV 300

Query: 301 ELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKR 360
           ELQR +LG DLI +     E+  E      EK+ LE+ PFA CVAKF VQLEVGEGLR+R
Sbjct: 301 ELQRLDLGSDLIDISNFDEEKESE---KIKEKKVLERFPFAGCVAKFAVQLEVGEGLRQR 360

Query: 361 EKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           EKRA K EIL+RV++A VSDAEAATI+AEVLWGSSP
Sbjct: 361 EKRAFKQEILERVKEASVSDAEAATIVAEVLWGSSP 393

The following BLAST results are available for this feature:

BLAST of Csa1G222880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT75_CUCSA	2.1e-215	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222880 PE=4 SV=1	[more]
A0A061GVT8_THECC	1.4e-139	65.39	Uncharacterized protein OS=Theobroma cacao GN=TCM_038176 PE=4 SV=1	[more]
A0A067G4V8_CITSI	3.2e-139	65.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035696mg PE=4 SV=1	[more]
U5G650_POPTR	3.2e-139	66.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06240g PE=4 SV=1	[more]
A0A067K215_JATCU	5.4e-139	65.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1	[more]

BLAST of Csa1G222880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210009\|gb\|KGN65105.1\|	3.0e-215	100.00	hypothetical protein Csa_1G222880 [Cucumis sativus]	[more]
gi\|590578712\|ref\|XP_007013585.1\|	2.0e-139	65.39	Uncharacterized protein TCM_038176 [Theobroma cacao]	[more]
gi\|641854661\|gb\|KDO73455.1\|	4.5e-139	65.43	hypothetical protein CISIN_1g035696mg [Citrus sinensis]	[more]
gi\|566174784\|ref\|XP_006381098.1\|	4.5e-139	66.07	hypothetical protein POPTR_0006s06240g [Populus trichocarpa]	[more]
gi\|802666098\|ref\|XP_012081168.1\|	7.7e-139	65.15	PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G222880	Csa1G222880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G222880.1	Csa1G222880.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G222880.1.utr3p1	Csa1G222880.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G222880.1.cds1	Csa1G222880.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G222880.1.utr5p1	Csa1G222880.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 94..301 score: 1.3E-10coord: 32..57 score: 1.3
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 33..54 score: 2.42E-14coord: 88..301 score: 2.42
None	No IPR available	PANTHER	PTHR35834	FAMILY NOT NAMED	coord: 3..391 score: 3.7E
None	No IPR available	PANTHER	PTHR35834:SF2	SUBFAMILY NOT NAMED	coord: 3..391 score: 3.7E