Csa1G165210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G165210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF1F0-ATPase inhibitor protein
LocationChr1 : 10297586 .. 10300652 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTCCAATACAATTCTAGCATAAGGAGATAGGTGTACCTATACGTTTCCAAGCGCGGAACGAGTATCGATTCGTTTCTTAAATTGAAGGGCTTCAATTTGCATAATCTCCACATATTTCGCCTTCAGAAATTTTGCATCTATAAAACCCTACTCGATTTCCCACTTCATCTCGGCAACTACTACCGTTTTCTTCCCAAAACTAACTCTCTTTTCTTCTTCTTTCGGTAAGTATTCTTCTTCAATCAAGCTTCCATAGTTGTTCTACGTTTTCCCACTAATGTAATGTTTCCATTCAATCACTCGTATTCATCTTTTTAGGAAAGTCGATCGATAGAAATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCGGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGGTCCCCATCTGAACCCTAACCGCCACCTCTGATTTTCACGTTTCGCATTTTCTTATTTGGGGGGCTTTTCTGATTATGTTAGGATTATGCTGATTGTTGTTTCAATGGATTGTAATTATAAGGCATTGAAAAAGTATATTTATAATCATAGATTAATAGAAAATGTGTGGTGTATTTGCTTGTTGATGACCTACAGCTTGCTTGTTTGAGATGTAGTTTCTCGAAGGGTCGAGACTACTATTCTTTTCTTTGTTTGTTAGTTTTTTTGTTTGAAATCAGAATGGTCAAACAAGAAATGATCGGGATGACTAAAACCAAATGGTACTCGTGTACGAAGTAGTTTATTCCATTCAAACTTAGACCCTTAATTACTTTTCATGCATATGTACTTATAAAATTCATTGTATGTTAAGTGTGTTGGATGATATATCATTAAATTTGCCTTCGCTCATAAGTCTAAACTTTTAGGTCAATAGATGATTTAAGATGATATCGTACCTTGATTAAGGAGGTACAATGTTAAAGTGGGAGGTTCAATCCTCATAACCAACAATTGTTGTACTAAAAACAAAACCATTTCAAAATTTATTGATTGGATCGTTGATGTCGTTGAGACAAATAGTCCTCTACTGCAAGCTAAGTAAGAAGTGGTATAAAATGAAACTATTTCAAGTATCAAATACGATGGAAGCGGATTGGATGTACCCAATTGTTCTTTTATTTGGAAGGGGCTTCTTGTAATCCATCTGGATTGTTTTGTTTTTATTATGTTTTTGTGGCCATTTTTGTTTACCCGCTAGTGTAGGTCTTGCGTTAGTTATTTATTATGTTTCCTGTTAGTTTGTTAGTTAGGTTGTTTCAGCTTGTTCTTAAATGCCTATAAATATACAGCTTTAGAGTCTGTTTTTCGCTAATCTACAATTTAATAAAACAGGCAAACTAACAAGTCTACAATCCTTTATATTTCTCGAACATCCCATTTTATTGTCGGTATGATGGTCTTATTTGAAGTAGAGGGTTGGTTTCTTGATATATTGCCATAGAGACCCATGACTTTGTAATCTAAGCTTCTTCAGTTCTTCTTAGTGCAGTTCTTCATTAATTACTAGAGTATAATTAAAGGCTTTCTCCAGGTAGTTGCACTTTCTTTTTCTAGGCCTTTTGCAGGTAGAGTATAATAGTAATAGATTCTTCTTTTCATGTGGAACATTTGTCTAAGACTCCAAGTTGAAGCATCAAAGTGCTAAGTCTTGGGGATTTATCAATGCCAAGAGTTTAGTTATTTCTCTGCATATGAGTGAACATTACTCGGTTACCACCTGCCTGCTTATGTGGTCTTTTTACCTTATTTCTATCCATATTTCTTTGTGTTGAATTTTTGCAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCCCGCAAGGTATGCTTGTAGTTTCTTAAAACTTTCATTTGAGAATCTAGAGTTTGAAATTATGGGATCTCCGGATCTTGGACAATCTAGCATTTCACATAGTAAACTTTTACAGTTCTCTTGATAATTGTAAAACAACTTCGTTTTATTGAAGTAATTAAATTACATGTTTTTGTTTTGAGGGGCTGAGTATTGATGGCCCCAAATCTTTTAGGTTTACTATTGTAGGTGCATGAAGAAGAATCGAGGAATGTAATGAGGTTTATGTAGGGATTGTGAGGTTCATTTATATTGCATTATTTCCTGTTTGTAGAATTTAGTTGGGAAGAGTTTTTGTGATTTAAGGGGTGAGCATTTTTAGTTGGAGGTATCATTGGCTGTGTTTTCTGTTGAGTTCTCTTAGGAGATATTGAGAAAGAGGGAATGCTCTCAAAACTTACCATGATATATGTTGATTAATAAAATTGATAGCCGTAACTTGTATCACGTATCTAGGTCTATTGTTAAATTGTAATATAGTTTTCTTTTTTTGAGTGAGCTGAATATTCTTATCTTCTTTGGGCTACAAATGCATTATATTTCTAGGGACCTAAACCAGAAGAAAAGCTAGGAGAGTCAGTAGCTGATTCCGTTCCAAGCAGCAGCTCAGCCTCAGCATCAGGAGCATCATCAACAGAGAAAATATCGACTGACAAACAGCGCAATTATGCTGTCGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGAGTTAACCAATGAAGTCATTTTCATATCACTAGCATCTGAAGCATGGGAGGTCAGCTTTCTCCTTTCCTCTACAAAATAAACCAAAAATTGAGATGCGTATGGATCTTGGTTAATGAATATTTGATGTTTCTCCTTGAAAAAGGTTTTTTGGCCTTATTTCTGTTTACTTTCATGGAAAATTAACCCTGAGACAGTGACAGGATGAGACATACACTGTGACAAAGACTTGGTTTTATTGGATTTCAATTTCACATTCTCTTCAAGGATATTCAGTAAATACTCTTTTTCTATCGTTTCTAAAAAAAGAAAGAAGAATACTCCGTTTCCATTACATTGTAGAAAGCTAATATGTATTTCCATAATTTTCAAACTTTTGAGTTTTTACGAACATAAGCATAGCCTTTTTCTTTTTTAG

mRNA sequence

ATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCGGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCCCGCAAGGGACCTAAACCAGAAGAAAAGCTAGGAGAGTCAGTAGCTGATTCCGTTCCAAGCAGCAGCTCAGCCTCAGCATCAGGAGCATCATCAACAGAGAAAATATCGACTGACAAACAGCGCAATTATGCTGTCGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGA

Coding sequence (CDS)

ATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCGGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCCCGCAAGGGACCTAAACCAGAAGAAAAGCTAGGAGAGTCAGTAGCTGATTCCGTTCCAAGCAGCAGCTCAGCCTCAGCATCAGGAGCATCATCAACAGAGAAAATATCGACTGACAAACAGCGCAATTATGCTGTCGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGA

Protein sequence

MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD*
Homology
[Close]
BLAST of Csa1G165210 vs. Swiss-Prot
Match: UMP2_ARATH (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-26
Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESVAD 62
           A R A RI SRRFSSG K+LSEEE+AAEN++IKK EQEKL+KLAR+GP      GE  A 
Sbjct: 2   ATRNALRIVSRRFSSG-KVLSEEERAAENVFIKKMEQEKLQKLARQGP------GEQAAG 61

Query: 63  SVPSSSSASASGASSTE---KISTDKQRNYAVVAGTVTILGALGWYLKS--KKKPE 114
           S   +  A A+ ++S E   K+S DK RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  SASEAKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]
BLAST of Csa1G165210 vs. TrEMBL
Match: A0A0A0LT33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165210 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.8e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60
           MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]
BLAST of Csa1G165210 vs. TrEMBL
Match: A0A067KE61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12683 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-35
Identity = 88/120 (73.33%), Postives = 94/120 (78.33%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKL----GE 62
           A R AAR  SRRFSSGGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEE      G 
Sbjct: 2   ATRMAARYVSRRFSSGGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEETATSGPGG 61

Query: 63  SVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSK-KKPEEVHD 118
           S  D  PS+SS+S +G  STEKISTDK +NYAVVAG VT  GALGWYL S+ KK EEV D
Sbjct: 62  SPTDVKPSASSSSTTG-ESTEKISTDKYKNYAVVAGIVTSFGALGWYLNSRGKKTEEVQD 120

[Close]
BLAST of Csa1G165210 vs. TrEMBL
Match: A0A061GV82_THECC (Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_041383 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.0e-34
Identity = 82/119 (68.91%), Postives = 93/119 (78.15%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKL----GE 62
           A R A R  SRRFSSGGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPE+      G 
Sbjct: 2   ATRMAVRYISRRFSSGGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEDTTAAGSGG 61

Query: 63  SVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           SV D+ PS S+ S SGA STEK+STDK +NYAV+AG +T+ GALGWY  SK+K +EV D
Sbjct: 62  SVTDAKPSGST-STSGA-STEKVSTDKYKNYAVLAGAITLAGALGWYFTSKEKKQEVQD 118

[Close]
BLAST of Csa1G165210 vs. TrEMBL
Match: B9SCV1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281740 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33
Identity = 83/116 (71.55%), Postives = 89/116 (76.72%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESVAD 62
           A R A R  SRRFSSGGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEK     A 
Sbjct: 2   ATRMAVRFVSRRFSSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEK-----AT 61

Query: 63  SVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSK-KKPEEVHD 118
           S P++    ++ ASST   STDK RNYAVVAGTVT+ GALGWYL S+ KK EEV D
Sbjct: 62  SGPATDVKPSASASSTSGASTDKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112

[Close]
BLAST of Csa1G165210 vs. TrEMBL
Match: A0A0D2RRG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G010200 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-33
Identity = 81/119 (68.07%), Postives = 91/119 (76.47%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK----LGE 62
           A R  AR  SRRFSSGGK+LSEEEKAAEN+YIKKTE+EKLEKLARKGPKPEEK     G 
Sbjct: 2   ATRMVARYMSRRFSSGGKVLSEEEKAAENVYIKKTEKEKLEKLARKGPKPEEKPAVGSGG 61

Query: 63  SVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           SV D+ PSSS+ S S ASSTEK+STDK +NYAV+ G VT   ALGWY+ S  K +E  D
Sbjct: 62  SVTDAKPSSST-STSRASSTEKVSTDKYQNYAVLTGVVTFASALGWYMISADKKKETQD 119

[Close]
BLAST of Csa1G165210 vs. TAIR10
Match: AT2G27730.1 (AT2G27730.1 copper ion binding)

HSP 1 Score: 120.2 bits (300), Expect = 8.8e-28
Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESVAD 62
           A R A RI SRRFSSG K+LSEEE+AAEN++IKK EQEKL+KLAR+GP      GE  A 
Sbjct: 2   ATRNALRIVSRRFSSG-KVLSEEERAAENVFIKKMEQEKLQKLARQGP------GEQAAG 61

Query: 63  SVPSSSSASASGASSTE---KISTDKQRNYAVVAGTVTILGALGWYLKS--KKKPE 114
           S   +  A A+ ++S E   K+S DK RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  SASEAKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]
BLAST of Csa1G165210 vs. NCBI nr
Match: gi|449443452|ref|XP_004139491.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 5.5e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60
           MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]
BLAST of Csa1G165210 vs. NCBI nr
Match: gi|659071663|ref|XP_008461298.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 113/126 (89.68%), Postives = 115/126 (91.27%), Query Frame = 1 

Query: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60
           MAAARTAARIFSRRFSS GKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK+GESV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  ADSVPSSS---------SASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKK 118
           ADSVPSSS         SASASGASS EKISTDKQRNYAVVAGTVTILGALGWYLKSKKK
Sbjct: 61  ADSVPSSSASGSSSASASASASGASS-EKISTDKQRNYAVVAGTVTILGALGWYLKSKKK 120

[Close]
BLAST of Csa1G165210 vs. NCBI nr
Match: gi|1009113297|ref|XP_015872743.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-35
Identity = 86/118 (72.88%), Postives = 93/118 (78.81%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKL---GES 62
           A+R  AR   RRFSS GKILSEEEKAAEN+YIKK EQEKLEKLARKGPKP+E     G S
Sbjct: 2   ASRMVARFVPRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPDEATETSGGS 61

Query: 63  VADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           VADS PS S++SA GA STE++STDK RNYAVVAG VT LGALGWYLKS  K  EV D
Sbjct: 62  VADSKPSGSTSSAGGA-STERVSTDKYRNYAVVAGVVTGLGALGWYLKSNAKKPEVQD 118

[Close]
BLAST of Csa1G165210 vs. NCBI nr
Match: gi|802621738|ref|XP_012076115.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas])

HSP 1 Score: 155.6 bits (392), Expect = 5.3e-35
Identity = 88/120 (73.33%), Postives = 94/120 (78.33%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKL----GE 62
           A R AAR  SRRFSSGGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEE      G 
Sbjct: 2   ATRMAARYVSRRFSSGGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEETATSGPGG 61

Query: 63  SVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSK-KKPEEVHD 118
           S  D  PS+SS+S +G  STEKISTDK +NYAVVAG VT  GALGWYL S+ KK EEV D
Sbjct: 62  SPTDVKPSASSSSTTG-ESTEKISTDKYKNYAVVAGIVTSFGALGWYLNSRGKKTEEVQD 120

[Close]
BLAST of Csa1G165210 vs. NCBI nr
Match: gi|470128266|ref|XP_004300067.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-34
Identity = 84/119 (70.59%), Postives = 93/119 (78.15%), Query Frame = 1 

Query: 3   AARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKL----GE 62
           A+R AAR FSRR SS GKILSEEE+AAEN+YIKKTEQEKLEKLARKGPKPE+K     GE
Sbjct: 2   ASRMAARFFSRRMSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEDKATAGPGE 61

Query: 63  SVADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           S+ D+ PS SS S SGA ST K+STDK RNYAVVAG VT   ALGWY+K  +K  EV D
Sbjct: 62  SITDAKPSGSS-SGSGA-STAKVSTDKYRNYAVVAGVVTAFAALGWYMKGSEKKAEVQD 118

The following BLAST results are available for this feature:
BLAST of Csa1G165210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UMP2_ARATH1.6e-2658.62Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
BLAST of Csa1G165210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT33_CUCSA3.8e-56100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165210 PE=4 SV=1[more]
A0A067KE61_JATCU3.7e-3573.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12683 PE=4 SV=1[more]
A0A061GV82_THECC7.0e-3468.91Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_041383 PE=4 SV=1[more]
B9SCV1_RICCO1.6e-3371.55Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281740 PE=4 SV=1[more]
A0A0D2RRG6_GOSRA2.0e-3368.07Uncharacterized protein OS=Gossypium raimondii GN=B456_004G010200 PE=4 SV=1[more]
BLAST of Csa1G165210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27730.18.8e-2858.62 copper ion binding[more]
BLAST of Csa1G165210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443452|ref|XP_004139491.1|5.5e-56100.00PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus][more]
gi|659071663|ref|XP_008461298.1|1.2e-5089.68PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo][more]
gi|1009113297|ref|XP_015872743.1|2.4e-3572.88PREDICTED: uncharacterized protein At2g27730, mitochondrial [Ziziphus jujuba][more]
gi|802621738|ref|XP_012076115.1|5.3e-3573.33PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas][more]
gi|470128266|ref|XP_004300067.1|1.6e-3470.59PREDICTED: uncharacterized protein At2g27730, mitochondrial [Fragaria vesca subs... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0045271 respiratory chain complex I
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU090034cucumber EST collection version 3.0transcribed_cluster
CU107494cucumber EST collection version 3.0transcribed_cluster
CU121462cucumber EST collection version 3.0transcribed_cluster
CU151241cucumber EST collection version 3.0transcribed_cluster
CU158911cucumber EST collection version 3.0transcribed_cluster
CU162595cucumber EST collection version 3.0transcribed_cluster
CU173194cucumber EST collection version 3.0transcribed_cluster
CU176393cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G165210.1Csa1G165210.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107494CU107494transcribed_cluster
CU173194CU173194transcribed_cluster
CU176393CU176393transcribed_cluster
CU151241CU151241transcribed_cluster
CU158911CU158911transcribed_cluster
CU090034CU090034transcribed_cluster
CU121462CU121462transcribed_cluster
CU162595CU162595transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRODOMPD199948coord: 13..114
score: 5.0
NoneNo IPR availablePANTHERPTHR33878FAMILY NOT NAMEDcoord: 3..117
score: 1.1
NoneNo IPR availablePANTHERPTHR33878:SF1SUBFAMILY NOT NAMEDcoord: 3..117
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G165210Cla003035Watermelon (97103) v1cuwmB042
Csa1G165210ClCG01G011970Watermelon (Charleston Gray)cuwcgB016
Csa1G165210Lsi03G001320Bottle gourd (USVL1VR-Ls)culsiB044
Csa1G165210MELO3C004698.2Melon (DHL92) v3.6.1cumedB010
Csa1G165210Cla97C01G011440Watermelon (97103) v2cuwmbB009
Csa1G165210Bhi08G000040Wax gourdcuwgoB049
Csa1G165210CSPI01G14790Wild cucumber (PI 183967)cpicuB000
Csa1G165210Cucsa.319850Cucumber (Gy14) v1cgycuB457
Csa1G165210CmaCh18G006520Cucurbita maxima (Rimu)cmacuB399
Csa1G165210CmoCh18G006700Cucurbita moschata (Rifu)cmocuB383
Csa1G165210Cp4.1LG09g05560Cucurbita pepo (Zucchini)cpecuB020
Csa1G165210CsGy1G014640Cucumber (Gy14) v2cgybcuB001
Csa1G165210Carg26269Silver-seed gourdcarcuB0000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G165210Melon (DHL92) v3.6.1cumedB078
Csa1G165210Silver-seed gourdcarcuB0931
Csa1G165210Watermelon (97103) v2cuwmbB007
Csa1G165210Watermelon (97103) v2cuwmbB026
Csa1G165210Cucurbita maxima (Rimu)cmacuB579
Csa1G165210Cucurbita moschata (Rifu)cmocuB569
Csa1G165210Melon (DHL92) v3.5.1cumeB015
Csa1G165210Watermelon (Charleston Gray)cuwcgB028
Csa1G165210Watermelon (97103) v1cuwmB057
Csa1G165210Watermelon (97103) v1cuwmB065
Csa1G165210Cucurbita pepo (Zucchini)cpecuB848
Csa1G165210Bottle gourd (USVL1VR-Ls)culsiB005
Csa1G165210Bottle gourd (USVL1VR-Ls)culsiB021
Csa1G165210Bottle gourd (USVL1VR-Ls)culsiB046