Carg26269 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26269
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	copper ion binding
Location	Cucurbita_argyrosperma_scaffold_150 : 267996 .. 270659 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAGAGGTTTGATCTCCGCTCGTTTCGCCTTCGGGAATTTTACATCAACAAATCCCCATTCCGCTTCCTCCAAATCAATTTCCACCGCTTTCTTCCTACAACTCTCTCTCTACCTCTCCTTCTTTCGGTGAGTAATCTTCTTCGAACAAGCTTGCATAGTTGTTCGATGTTTTCTCGGTAATTGTTATCTTTGCTTCTTGTTAGGAAACGCGATCTATCGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGGTCCCCATCTGTAGCTCTGACCTGTGATTTTTGCGTTTTGCGAATGTTTTTTTATCTGCTTTTCTGATTTTGTAAGGATCGTGTTGGTTGTTTCTTAGATTATATGCAATGAAATGAATTGAAAAGTATGGATTTGGTTGTTGCAGACGTACAGCTTGCTGGTTTTAAGAATTTTTTAGTTTCTGGATGAATCGAACTCTATCCTGTCAAATGAGCCTACTATTCTTTTCTATTTTTAGATTTCTCATTATTCTTGTTTGTTTGAAATAAGATCGTATCGTTTGGTTTTAGAAACGGCTTACAAATTTGTTTAGGTATTGGAGGAGTTGATGATTTATAGTCAATTCAAAAGGTTTGAAATCTCGCAGTAATGTGTGCAAAGAAGAAGAGAACGTACGATAATGTTTTATTTGATCAACTAGTTATGTCTTTCATTTTGAATAAGTAGGCCTTAAGATATTTTATTAGGTTAGATTTATCTTCTTATTAGGTTTTTCTTATCGTTCCCTGTTTCATAAATTGTTATATTTGATTGATGAAAATGAAAAGGTTTGGGGAATTTACTCGTGGGAACTGTACATAGTTTTTCCTTTTAAGTTGTTTGGAGACTCGTTAATGGCGGTCTAGGCTCCCTCTAACAAGTGTGCCGTCCTTTTCAATTTCTACTCTCCAGTGTTCAATTATTGTTTCTAATTTATCGTTCTCCGGGATAGATGGTATTATTGAAATTAAGGATCGGTTTTTGGTTATTGCCATATAGGTTCATGATTTTGTAATCAAAGCTTTCTTTGTGTTGAGTTCTATAGTTCTTCATTTTGTTGGTAAATAACAGAAAGTTCTTCCAGTTTGTTGTACTTTATTGTTCTTAATGATAGTTTTTTTGTCAATATATATAACTGAAGTTTTTAATGTCGGACGTCAGTCCAATCTGAAACACGAAATCGCAAATTCTTGGAGATTTTTCAATGTCAAGAGTTTGTATGTGTACGAGTAAACATGCCACCTTCACCATCTGCTTGCTATTATAGTATCTTTAGTACTTGTTCTCATTGTTTGATTGTGATTTTGTAGAAAATTGAACAAGAGAAATTGGAGAAGCTTGCACGCAAGGTATGTTGTAGTTCCTTATAAAATTAATTTGAGAACTTGATGATTGAAATTATTTGGTTCTTGGATAATTTAGCTCCTACAAACGAAATTTTTGTGGTCTTTTTACCATTATAAAACTATGATATGATCTTATAGAAGTAACTCTAGATGTTTTATTCTATTGATGAGGTTTGTCAAGAAAATATATTATCATCTTTGGGGTGAAGAGAGGCACTGATTGTGGTTTGGAAGTATCCTATCCATACCATAAGCTATTTTCATGGTTCCATGATGTTATATGAACCACTTTTTCAACAAATTAATATTTGGAAGATGAGTTGGAAAGACGTTGAGTGCTAAAGCAACTTGATTACAGTAAATGGAAGCTAAATCCACCGTGGTCTAGTTTTTGAACTAGCTTTTATGTATCTATCAGATGATACTGTCCGTAAACTGATATTTTTTATTTCTTCAATGGATGTTTACTCTAAATCAAAGCTATGATCTCCAAGACATGAATTTACAATTAACCCTTTGAGTCTTTGACCATTTGGCCAATAGAGACTAGTTTTTCCTTTAAGAGCTCAGATTCCTTGGAGAGATTTTAAGCTGTCTGATGTTGTTGCCTGTTTTCCTTTTCGAATTTCATCTTTCTTTGAAGTTTATGTGAATTCCAATCACATCGTATTCATTTAGTTCTATTATCATATTTACTCTCTCAACTTGTTATGGTGAACTCCTAGTAATATAATTATCCTTTCTCGAGTGAGTCAGATGTTCTAATCTTCCTGGCTACAAATGGCTAATGTATTTAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCTATTCCAAGTGGGTCAGCCTCCTCAGGGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCACGACTGAGATAGCTAACAGCATGTAGTCTTTCCATATCATCAGGATCTGGAGGGAGGGAGGAGTTTGAGTGGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTTGGCTCTTGGTTTATGAATACATTCTGTTCAGATTTACGTTTCTCTCTGGATAATGGGTTTCTTTTCACCCTTATTTCTTTCTCTTGAAAATTAACAAACAGTGAGTTAGAGAC

mRNA sequence

TTGAGAGGTTTGATCTCCGCTCGTTTCGCCTTCGGGAATTTTACATCAACAAATCCCCATTCCGCTTCCTCCAAATCAATTTCCACCGCTTTCTTCCTACAACTCTCTCTCTACCTCTCCTTCTTTCGGAAACGCGATCTATCGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAATTGAACAAGAGAAATTGGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCTATTCCAAGTGGGTCAGCCTCCTCAGGGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCACGACTGAGATAGCTAACAGCATGTAGTCTTTCCATATCATCAGGATCTGGAGGGAGGGAGGAGTTTGAGTGGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTTGGCTCTTGGTTTATGAATACATTCTGTTCAGATTTACGTTTCTCTCTGGATAATGGGTTTCTTTTCACCCTTATTTCTTTCTCTTGAAAATTAACAAACAGTGAGTTAGAGAC

Coding sequence (CDS)

ATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAATTGAACAAGAGAAATTGGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCTATTCCAAGTGGGTCAGCCTCCTCAGGGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCACGACTGA

Protein sequence

MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD

Homology

[Close]

BLAST of Carg26269 vs. NCBI nr
Match: XP_022945209.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD
Sbjct: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of Carg26269 vs. NCBI nr
Match: XP_023542814.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 9.2e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAA RTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESV
Sbjct: 1   MAAVRTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD
Sbjct: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of Carg26269 vs. NCBI nr
Match: XP_022967119.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 99/116 (85.34%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEE      
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEXXXXXX 60

Query: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
                 GS    SGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD
Sbjct: 61  XXXXXXGSXXXXSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of Carg26269 vs. NCBI nr
Match: XP_022142661.1 (uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_022142662.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 92/117 (78.63%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARI SRRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEKP  S 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  AESIPS-GSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           A+SIPS            EKIS+DK+RNYAVVAGTVTI GA+GWYLKSKKKPEEV D
Sbjct: 61  ADSIPSXXXXXXXXXXXXEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]

BLAST of Carg26269 vs. NCBI nr
Match: XP_004139491.1 (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus] >XP_011654467.1 PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus] >KGN64938.1 hypothetical protein Csa_1G165210 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 93/117 (79.49%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEK  ESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  AESI-PSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           A+S+              EKIS+DK RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVXXXXXXXXXXXXXXEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of Carg26269 vs. TAIR10
Match: AT2G27730.1 (copper ion binding)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-25
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A RI SRRFS SGK+LSEEE+AAEN++IKK+EQEKL+KLAR+G  P E+   S +E
Sbjct: 2   ATRNALRIVSRRFS-SGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGSASE 61

Query: 63  SIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKS--KKKPE 113
           +  +G+ +S S  S  K+S DK RNYAVVAG V I G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of Carg26269 vs. Swiss-Prot
Match: sp|Q9ZUX4|UMP2_ARATH (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A RI SRRFS SGK+LSEEE+AAEN++IKK+EQEKL+KLAR+G  P E+   S +E
Sbjct: 2   ATRNALRIVSRRFS-SGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGSASE 61

Query: 63  SIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKS--KKKPE 113
           +  +G+ +S S  S  K+S DK RNYAVVAG V I G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of Carg26269 vs. TrEMBL
Match: tr|A0A0A0LT33|A0A0A0LT33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.4e-37
Identity = 93/117 (79.49%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEK  ESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  AESI-PSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           A+S+              EKIS+DK RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVXXXXXXXXXXXXXXEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of Carg26269 vs. TrEMBL
Match: tr|A0A1Q3D1F3|A0A1Q3D1F3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29741 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.5e-34
Identity = 86/119 (72.27%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVES--- 62
           A R  AR  SRRFS  GK+L EEEKAAEN+YIKKIEQEKLEKLARKGPKPEEKP      
Sbjct: 2   ATRVVARNVSRRFSSGGKVLGEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKPAAGSGG 61

Query: 63  -VAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLK-SKKKPEEVHD 117
            V ++ PS S S+ SG+STEK+S+DKYRNYAV+AGT+T FGALGWYLK S KKPEEVHD
Sbjct: 62  WVTDAKPSVSEST-SGSSTEKVSTDKYRNYAVLAGTITAFGALGWYLKASSKKPEEVHD 119

[Close]

BLAST of Carg26269 vs. TrEMBL
Match: tr|A0A2C9VYD1|A0A2C9VYD1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003100 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-33
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVE---- 62
           A R A R  SRRFS SGKILSEEEKAAEN++IKK EQEKLEKLARKGPKPEEK       
Sbjct: 2   ATRMAVRYVSRRFSSSGKILSEEEKAAENVFIKKTEQEKLEKLARKGPKPEEKTTSGSGG 61

Query: 63  SVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSK-KKPEEVHD 117
           S  +  P+ SASS SGAS EK+S+DKYRNYAVVAGTVTIFGALGWYL S+ KK EEV D
Sbjct: 62  SPTDVKPNASASSTSGASAEKVSTDKYRNYAVVAGTVTIFGALGWYLNSRGKKTEEVQD 120

[Close]

BLAST of Carg26269 vs. TrEMBL
Match: tr|B9SCV1|B9SCV1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1281740 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.4e-32
Identity = 87/116 (75.00%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A R  SRRFS  GKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEK     A 
Sbjct: 2   ATRMAVRFVSRRFSSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKATSGPAT 61

Query: 63  SI-PSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSK-KKPEEVHD 117
            + PS SASS SGAST     DKYRNYAVVAGTVT+FGALGWYL S+ KK EEV D
Sbjct: 62  DVKPSASASSTSGAST-----DKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112

[Close]

BLAST of Carg26269 vs. TrEMBL
Match: tr|A0A2P2Q2W1|A0A2P2Q2W1_RHIMU (Uncharacterized protein At2g27730 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31
Identity = 82/118 (69.49%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 4   ARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVA-- 63
           +R A R  SRRFS  G+ILSEEEKAAEN+YIKK+EQEKLEKLARKGPKPEE    S A  
Sbjct: 11  SRLATRFVSRRFSSGGRILSEEEKAAENVYIKKVEQEKLEKLARKGPKPEENATPSSAGP 70

Query: 64  --ESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKS-KKKPEEVHD 117
             +  PS SASS  G S EK+S+DKYRNYAVVAG VTI G LGWYLKS  KK +EVHD
Sbjct: 71  ATDVKPSASASSTRGTSNEKVSADKYRNYAVVAGAVTILGTLGWYLKSGSKKADEVHD 128

The following BLAST results are available for this feature:

BLAST of Carg26269 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945209.1	3.2e-52	99.14	uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata]	[more]
XP_023542814.1	9.2e-52	98.28	uncharacterized protein At2g27730, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022967119.1	1.1e-41	85.34	uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima]	[more]
XP_022142661.1	1.1e-36	78.63	uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_02214...	[more]
XP_004139491.1	1.4e-36	79.49	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus] >X...	[more]

BLAST of Carg26269 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27730.1	2.3e-25	59.82	copper ion binding	[more]

BLAST of Carg26269 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUX4\|UMP2_ARATH	4.2e-24	59.82	Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg26269 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT33\|A0A0A0LT33_CUCSA	9.4e-37	79.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1	[more]
tr\|A0A1Q3D1F3\|A0A1Q3D1F3_CEPFO	7.5e-34	72.27	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29741 PE=4...	[more]
tr\|A0A2C9VYD1\|A0A2C9VYD1_MANES	2.8e-33	73.11	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003100 PE=4 SV=...	[more]
tr\|B9SCV1\|B9SCV1_RICCO	5.4e-32	75.00	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1281740 PE=4 SV=1	[more]
tr\|A0A2P2Q2W1\|A0A2P2Q2W1_RHIMU	1.6e-31	69.49	Uncharacterized protein At2g27730 OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26269-RA	Carg26269-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..80
None	No IPR available	PANTHER	PTHR33878:SF1	SUBFAMILY NOT NAMED	coord: 3..116
None	No IPR available	PANTHER	PTHR33878	FAMILY NOT NAMED	coord: 3..116
None	No IPR available	PRODOM	PD199948		coord: 13..114 e-value: 2.0E-14 score: 185.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26269	Cla003035	Watermelon (97103) v1	carwmB0002
Carg26269	Csa1G165210	Cucumber (Chinese Long) v2	carcuB0000
Carg26269	CSPI01G14790	Wild cucumber (PI 183967)	carcpiB0000
Carg26269	Cucsa.319850	Cucumber (Gy14) v1	carcgyB0000
Carg26269	CmaCh18G006520	Cucurbita maxima (Rimu)	carcmaB0000
Carg26269	CmoCh18G006700	Cucurbita moschata (Rifu)	carcmoB0000
Carg26269	Cp4.1LG09g05560	Cucurbita pepo (Zucchini)	carcpeB0000
Carg26269	CsGy1G014640	Cucumber (Gy14) v2	carcgybB0000
Carg26269	MELO3C004698.2	Melon (DHL92) v3.6.1	carmedB0000
Carg26269	CsaV3_1G014900	Cucumber (Chinese Long) v3	carcucB0000
Carg26269	Bhi08G000040	Wax gourd	carwgoB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26269	Bottle gourd (USVL1VR-Ls)	carlsiB000
Carg26269	Melon (DHL92) v3.5.1	carmeB0000
Carg26269	Watermelon (Charleston Gray)	carwcgB0000
Carg26269	Watermelon (Charleston Gray)	carwcgB0001
Carg26269	Watermelon (97103) v1	carwmB0000
Carg26269	Watermelon (97103) v1	carwmB0001
Carg26269	Watermelon (97103) v1	carwmB0003
Carg26269	Watermelon (97103) v2	carwmbB0000
Carg26269	Watermelon (97103) v2	carwmbB0001