CmaCh18G006520 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Copper ion-binding protein
Location	Cma_Chr18 : 5939543 .. 5942549 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGGTTGTAATTTTGTTTATACCTTTTCCAAGCTTGAACGAGTTCCGATTCATTTCTTGGATCGAACGGCTTTGAGAGGTTTGATCTCCGCTCGTTTCGCCTTCGGGAATTTTACATCAACAAATCCCCATTCCGCTTCCTCCAAATCAATTTCCACCGCTTTCTTCCTAAAACTCTCTCTCTACCTCTCCTTCTTTCGGTAAGTAATCTTCTTCGAACAAGCTTGCATAGTTGTTATATGTTTTCTCGGTAATTGTTATCTTTGCTTGCTTCTTGTTAGGAAACGCGATCTGTTGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGGTCCCCATCTGTAGCTCTGACCTGTGATTTTTGCGTTTTGCGAATGTTTTTTATCTGCTTTTCTGATTTTGTAAGGATCGTGTTGGTTCTTTCTTAGATTATATGCAATGAAATGAATTAAAAAGTATGGTGGATTTGGTTGTTGCAGACGTACAGCTTGCTTGTTTTAAGAATTTTTTAGTTTCTGGATGAATCGAACTCTATCCTGTCAAATTAGCCTACTATTTCTTTTCTATTTTTAGATTGCTCATTATTCGTTTTTGTTTGAATTAAGATCGTATCGTTTGGTTTTAGAAACGGCTTACAAATTTGTTTAGGTATTGGAGGAGTTGTTGTTTTATAGTCAATTCAAAAGGTTTGAAATCTCGCAGTAATATGCATAGAAGAAGAGAACGTACGATAATGTTTTATTTGATCAACTAGTTATGTCTTTCATTTTGAATAATTAGGCCTTAAGATATTTTATTAGGTTAGAATTATCTTCTTATTAGGTTTTCTTAGTTTTAGGTTTTTTTTATCGTTTCCTGTTTCATAAATTGTTATATTTGATTGATGAAAATGATAAAGCTTGGAGAATTTACTCGTGGGAAATGTACATGGTATTTCCTTTTAAGTTGTTTATTAATGGCGGTCTAGACTCCCTCTAACAAGTGTACCGTCCTTTTCAATTTCTACTCCAGTGTTCAATTATTGTTTCTAATTTACTGGTCTCCAGGATAGATGGTATTATTGAAGTAGAGGATTGGTTTTTTGATATTGCCATATAGGTTCATGACTTTATAATCAAAGCTTTCTTTGTGTTGAGTTCTATAGTTCTTCATTTTGTCTGTAAATAATTGAAAGTTTTTCCAGTTAGTTGTACTTTATTGTTCTTAATGATAGTTTTTTTGTCAATATATATAACTGAAGTTTTTAATGTCGGACGTCTGTCTAATCTGAAACATGAAATTGCAAAGTCTTGGAGATTTTTCAATGTCAAGAGTTTGTATATGTACGAGTGAACATGCCACCTTCACCATCTGCTTGCTATTATAGTGTCTTTAGTACTTGTTCTCATTGTTTGATTTTGATTTTGCAGAAAACTGAACAAGAGAAACTTGAGAAGCTTGCACGCAAGGTATGTTGTAGTTCCTTATAAAATTAATTTGAGAACTTGGTGATTGAAATTATTCGGTTCTTGGATAATTTAGCTCTTACAAACGAAATTTTTGTAGTCTTTTTACCATTATAAAACTATGATATGATCTTATAGAAGTGACTTGAGATGTTTTATTCTATTGATGAGGGTTGTCAAGAAAATAGATTATCATTTCTTTTGGGTGAAGAGAGCCACTGATTGTGGTTTGGAAGTATCCTATCCTTACCATAAGCTATTTTCATGGTTACATGATGTTATATGAACCACTTTTTCAACAAATTAATATTTGGAAGATGAGTTGGAAAGACGTTGAGTGCTAAAGCAACTTGATTACAGTAAATGGAAGCTAAATCCACCGTGGTCATTCATACTCGGTGTTTTATAAGTTGGGGACATCCTATAAAATTTGGTGGTGGTTCTCGATTTGGACTAGCTTTTATGTATCTATCAGATGATACTGATCGTACATTGATATTTTTTATTTTCTTCAATGGATGTTTACTCTGAATCAAAGCTGTGATCTCAAAGACATAAATTTACAATTAACCCTTTGAGTCTTTGACCATTTGGCCAATAGAGACTAGTTTTTCTTTTAAGAGCTCAGATTCCTTGGAGAGATTTTAAGCTGTCTGATGTTGTTGCCTGTTTTCTTTCTAGAATTTCATCTTTCTTTGAAGTTTATGTGAATTCCAATCACATCGTATTCATTTAGTTCCGTTATAATATTTACTCTCTCCACTTGTTATGGTGAACTCTTGTACTTGGACATCTAGATTTGTAGTAAAATAACTATCCTGGCTGCAAATGGCTAATGTATTCAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCCGAGTCGATTCCAAGTGGGTCAGCCTCCTCAGCGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCATGACTGAGATAGCTAACAGCATGTAGTTTATCCATATCATCAGGATCTGGAGGGAGGGAGGGAGGAGTTTGAGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTGGCTCTTGGTTTATGAATGCAATTCTGTTCAGATTTACGTTTCTCTCAGGATAATGGTTTCTTTTCACCCTTATTTCTTTCTCTTGAAAATTAACAGTGAGTTAGAGACAAAAATATGGTCTAATTGGGTTTCATTATCACATTCTCTCCAACAATATTGAGAAAATAAATCCTCATAAAGCGGTTGTATCTTTCGATCCCATCCCAACTCTGGCGTTGTAAAGGCTTGAATGGATGGATATTATATCCTTGAGAATATCGTTGAAAATTGAAGTACTATATTTTGTTATGCATATGAATGCTACTGAATATCGTTTGATGGGAT

mRNA sequence

AGGGGTTGTAATTTTGTTTATACCTTTTCCAAGCTTGAACGAGTTCCGATTCATTTCTTGGATCGAACGGCTTTGAGAGGTTTGATCTCCGCTCGTTTCGCCTTCGGGAATTTTACATCAACAAATCCCCATTCCGCTTCCTCCAAATCAATTTCCACCGCTTTCTTCCTAAAACTCTCTCTCTACCTCTCCTTCTTTCGGAAACGCGATCTGTTGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAGAAACTTGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCCGAGTCGATTCCAAGTGGGTCAGCCTCCTCAGCGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCATGACTGAGATAGCTAACAGCATGTAGTTTATCCATATCATCAGGATCTGGAGGGAGGGAGGGAGGAGTTTGAGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTGGCTCTTGGTTTATGAATGCAATTCTGTTCAGATTTACGTTTCTCTCAGGATAATGGTTTCTTTTCACCCTTATTTCTTTCTCTTGAAAATTAACAGTGAGTTAGAGACAAAAATATGGTCTAATTGGGTTTCATTATCACATTCTCTCCAACAATATTGAGAAAATAAATCCTCATAAAGCGGTTGTATCTTTCGATCCCATCCCAACTCTGGCGTTGTAAAGGCTTGAATGGATGGATATTATATCCTTGAGAATATCGTTGAAAATTGAAGTACTATATTTTGTTATGCATATGAATGCTACTGAATATCGTTTGATGGGAT

Coding sequence (CDS)

ATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAGAAACTTGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCCGAGTCGATTCCAAGTGGGTCAGCCTCCTCAGCGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCATGACTGA

Protein sequence

MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD

Homology

[Close]

BLAST of CmaCh18G006520 vs. Swiss-Prot
Match: UMP2_ARATH (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A RI SRRFS SGK+LSEEE+AAEN++IKK EQEKL+KLAR+GP   E+   S +E
Sbjct: 2   ATRNALRIVSRRFS-SGKVLSEEERAAENVFIKKMEQEKLQKLARQGPG--EQAAGSASE 61

Query: 63  SIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKS--KKKPE 113
           +  +G+ +SAS  S  K+S DK RNYAVVAG V I G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of CmaCh18G006520 vs. TrEMBL
Match: A0A0A0LT33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165210 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-44
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 1


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK  ESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  AESIPSGSASSASGA-STEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           A+S+PS S++SASGA STEKIS+DK RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of CmaCh18G006520 vs. TrEMBL
Match: A0A067KE61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12683 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.9e-32
Identity = 86/119 (72.27%), Postives = 93/119 (78.15%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK----PVE 62
           A R AAR  SRRFS  GKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEE     P  
Sbjct: 2   ATRMAARYVSRRFSSGGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEETATSGPGG 61

Query: 63  SVAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSK-KKPEEVHD 117
           S  +  PS S+SS +G STEKIS+DKY+NYAVVAG VT FGALGWYL S+ KK EEV D
Sbjct: 62  SPTDVKPSASSSSTTGESTEKISTDKYKNYAVVAGIVTSFGALGWYLNSRGKKTEEVQD 120

[Close]

BLAST of CmaCh18G006520 vs. TrEMBL
Match: B9SCV1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281740 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31
Identity = 86/116 (74.14%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A R  SRRFS  GKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEK     A 
Sbjct: 2   ATRMAVRFVSRRFSSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKATSGPAT 61

Query: 63  SI-PSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSK-KKPEEVHD 117
            + PS SASS SGAST     DKYRNYAVVAGTVT+FGALGWYL S+ KK EEV D
Sbjct: 62  DVKPSASASSTSGAST-----DKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112

[Close]

BLAST of CmaCh18G006520 vs. TrEMBL
Match: A0A067EW11_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g044735mg PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 9.3e-31
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAE 62
           A+R A R FSRRFS SGK+LSEEEKAAEN+YIKK EQEKLEK+ARKGPKPEE P  S + 
Sbjct: 71  ASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAAS-SG 130

Query: 63  SIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           S      +SA+GASTEK+S+D+YRNYAV+AG +T   ALGWYLKS +K E+V D
Sbjct: 131 SGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKEQVQD 183

[Close]

BLAST of CmaCh18G006520 vs. TrEMBL
Match: A0A061GV82_THECC (Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_041383 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 9.3e-31
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVE---- 62
           A R A R  SRRFS  GKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPE+        
Sbjct: 2   ATRMAVRYISRRFSSGGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEDTTAAGSGG 61

Query: 63  SVAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           SV ++ PSGS +S SGASTEK+S+DKY+NYAV+AG +T+ GALGWY  SK+K +EV D
Sbjct: 62  SVTDAKPSGS-TSTSGASTEKVSTDKYKNYAVLAGAITLAGALGWYFTSKEKKQEVQD 118

[Close]

BLAST of CmaCh18G006520 vs. TAIR10
Match: AT2G27730.1 (AT2G27730.1 copper ion binding)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-25
Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAE 62
           A R A RI SRRFS SGK+LSEEE+AAEN++IKK EQEKL+KLAR+GP   E+   S +E
Sbjct: 2   ATRNALRIVSRRFS-SGKVLSEEERAAENVFIKKMEQEKLQKLARQGPG--EQAAGSASE 61

Query: 63  SIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKS--KKKPE 113
           +  +G+ +SAS  S  K+S DK RNYAVVAG V I G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of CmaCh18G006520 vs. NCBI nr
Match: gi|449443452|ref|XP_004139491.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 1


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK  ESV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  AESIPSGSASSASGA-STEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           A+S+PS S++SASGA STEKIS+DK RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of CmaCh18G006520 vs. NCBI nr
Match: gi|659071663|ref|XP_008461298.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 4.7e-44
Identity = 105/125 (84.00%), Postives = 110/125 (88.00%), Query Frame = 1


Query: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK  ESV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  AESIPSGSAS---------SASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKP 117
           A+S+PS SAS         SASGAS+EKIS+DK RNYAVVAGTVTI GALGWYLKSKKKP
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]

BLAST of CmaCh18G006520 vs. NCBI nr
Match: gi|470128266|ref|XP_004300067.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 151.8 bits (382), Expect = 7.6e-34
Identity = 85/118 (72.03%), Postives = 96/118 (81.36%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK----PVE 62
           A+R AAR FSRR S SGKILSEEE+AAEN+YIKKTEQEKLEKLARKGPKPE+K    P E
Sbjct: 2   ASRMAARFFSRRMSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEDKATAGPGE 61

Query: 63  SVAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           S+ ++ PSGS SS SGAST K+S+DKYRNYAVVAG VT F ALGWY+K  +K  EV D
Sbjct: 62  SITDAKPSGS-SSGSGASTAKVSTDKYRNYAVVAGVVTAFAALGWYMKGSEKKAEVQD 118

[Close]

BLAST of CmaCh18G006520 vs. NCBI nr
Match: gi|1009113297|ref|XP_015872743.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-33
Identity = 85/117 (72.65%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVES--- 62
           A+R  AR   RRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKP+E    S   
Sbjct: 2   ASRMVARFVPRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPDEATETSGGS 61

Query: 63  VAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 117
           VA+S PSGS SSA GASTE++S+DKYRNYAVVAG VT  GALGWYLKS  K  EV D
Sbjct: 62  VADSKPSGSTSSAGGASTERVSTDKYRNYAVVAGVVTGLGALGWYLKSNAKKPEVQD 118

[Close]

BLAST of CmaCh18G006520 vs. NCBI nr
Match: gi|802621738|ref|XP_012076115.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas])

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-32
Identity = 86/119 (72.27%), Postives = 93/119 (78.15%), Query Frame = 1


Query: 3   AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK----PVE 62
           A R AAR  SRRFS  GKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEE     P  
Sbjct: 2   ATRMAARYVSRRFSSGGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEETATSGPGG 61

Query: 63  SVAESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSK-KKPEEVHD 117
           S  +  PS S+SS +G STEKIS+DKY+NYAVVAG VT FGALGWYL S+ KK EEV D
Sbjct: 62  SPTDVKPSASSSSTTGESTEKISTDKYKNYAVVAGIVTSFGALGWYLNSRGKKTEEVQD 120

The following BLAST results are available for this feature:

BLAST of CmaCh18G006520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UMP2_ARATH	4.2e-24	60.71	Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g...	[more]

BLAST of CmaCh18G006520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT33_CUCSA	1.5e-44	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165210 PE=4 SV=1	[more]
A0A067KE61_JATCU	2.9e-32	72.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12683 PE=4 SV=1	[more]
B9SCV1_RICCO	1.1e-31	74.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281740 PE=4 SV=1	[more]
A0A067EW11_CITSI	9.3e-31	67.54	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g044735mg PE=4 S...	[more]
A0A061GV82_THECC	9.3e-31	66.95	Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_041383 PE=4 SV=1	[more]

BLAST of CmaCh18G006520 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27730.1	2.3e-25	60.71	copper ion binding	[more]

BLAST of CmaCh18G006520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443452\|ref\|XP_004139491.1\|	2.1e-44	88.89	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus]	[more]
gi\|659071663\|ref\|XP_008461298.1\|	4.7e-44	84.00	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo]	[more]
gi\|470128266\|ref\|XP_004300067.1\|	7.6e-34	72.03	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Fragaria vesca subs...	[more]
gi\|1009113297\|ref\|XP_015872743.1\|	6.4e-33	72.65	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Ziziphus jujuba]	[more]
gi\|802621738\|ref\|XP_012076115.1\|	4.2e-32	72.27	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0045271	respiratory chain complex I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006520.1	CmaCh18G006520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRODOM	PD199948		coord: 13..114 score: 2.0
None	No IPR available	PANTHER	PTHR33878	FAMILY NOT NAMED	coord: 3..116 score: 9.8
None	No IPR available	PANTHER	PTHR33878:SF1	SUBFAMILY NOT NAMED	coord: 3..116 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G006520	Cucsa.319850	Cucumber (Gy14) v1	cgycmaB0884
CmaCh18G006520	Cla003035	Watermelon (97103) v1	cmawmB386
CmaCh18G006520	Csa1G165210	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G006520	CSPI01G14790	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G006520	CmoCh18G006700	Cucurbita moschata (Rifu)	cmacmoB410
CmaCh18G006520	Cp4.1LG09g05560	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G006520	MELO3C004698.2	Melon (DHL92) v3.6.1	cmamedB425
CmaCh18G006520	CsaV3_1G014900	Cucumber (Chinese Long) v3	cmacucB0476
CmaCh18G006520	Bhi08G000040	Wax gourd	cmawgoB0525
CmaCh18G006520	CsGy1G014640	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G006520	Carg26269	Silver-seed gourd	carcmaB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G006520	Watermelon (97103) v2	cmawmbB394
CmaCh18G006520	Watermelon (97103) v2	cmawmbB412
CmaCh18G006520	Cucurbita maxima (Rimu)	cmacmaB214
CmaCh18G006520	Melon (DHL92) v3.5.1	cmameB368
CmaCh18G006520	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G006520	Watermelon (97103) v1	cmawmB383
CmaCh18G006520	Watermelon (97103) v1	cmawmB384
CmaCh18G006520	Cucurbita pepo (Zucchini)	cmacpeB418
CmaCh18G006520	Bottle gourd (USVL1VR-Ls)	cmalsiB378