Csa1G145870 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCGCATTCCATTTTAATTAGAAAGACTGTTGCAAGAAAGTCCATTCTTTTGTGAGAAAACCCCCACAATACAATCCGGCGGCCGAAAAGGAGGGAGGGAAAATGGGAAAGGGAGACAAGAAGCAAAAACATCACGATCGACATTCTCGTCGAAGAGACTTCAAGTTTACTTCTGAAGGTGAAGTTATGGAAGATGGTGATTTCAACAGCCACCCCCTTCCCCAAGAAGAGGAACAAGAAGTAGAAGTAGAAGAAGAGGAACAAGAAACAAGCAATGAGGCCTCGTCAATGGATATTCCTTCCAAATTTCAACTCTATCAACAGTCTGTTCAGGTTTGGCTCTTCTTCTTCTATTGCAACTCTAATCCTCCCATGGGTATGTGGAAAATCATGTGCATATTTGGAAGAAACGATCATTTTCGTGCATACATCAATTCTCCGTACGAACTGATGAGTTGTATATTCTTCGTTGATTGCTGAAATTTCTTCTTTATTGTCTCAAGTCCCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTATGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTTTGTGGCACTGCACTTTTAAGGTACACCGCTGTTTTCTTGCTGATATATGTTGACTCGGGTTATATTGGACAGGGCCAAATAGAAATTTGAGTGAATTCCATTTCGGCCATCTATTCGTTGAGGGGTGGTTGCAGATCATTGTAAATGTAGTAAGAAATGAAACAAATATTCGTGTATAATTGTTATTATGATTATAGTTTATCTATGTCTATCATTCAATAATTGCTATAATCTTAGTAATTAATTTTTTAGGTTATAGATAATTGTAATAATCAATGATAATAGTTTATGATTAGGTTTGTAATATACTTTGATGGTGTAATCCCATGACATTCTGTTACCTTGACTCCATGCTTAAGAAAGAAAAGAACGTAGCAGGAGTATTTTTCATTGCAACCACCAGTTAAATCCTCATCAGTCACGAACTACTTTTATTTTTAAATTTTTATAAATACATTTCTAGTAAGTTGGTTGGCCGATGAACTTATTTTCAAAGATTGAGACCATCATGCATGGAATAGCTTGAGAATAGTTGAACTTGATTTGCCATTATTCTTTTGAACTAAACTCACTTTTTGTTTAGTTGTTTTGGGGCTGAGGCTTCCCCTCTTGTTCGGCTGTTGTTTTTATATGTCCTGGCAGTTTATTTTTTTTTAGTTTTTAGTTTTTTAGAAGGAGAAGGAATAGTTCAACTTGACTTTATTGTTATTATTATTTTTTTCAATTTCTATTTGTGAACAAGCTGGAACCAAACTTTGAATTGTGAGTCATTTCGTTGGTGTTAGTTGGATGGATTAGAAATCTGATACGTATTACTTCACACAGTCTAGAATGGCTTCGAAGTGATTCACGTAGGACTGCTGTAGGATTGGATCTTGATCTTGAGGCATTAGTCTGGTGCATGGAGAACAATGTTAATCGAATTGGAGCTGATGGATTTTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGAGGTGGACCTGATTGACAATTTAACAATGGAAGATAGCAAAGATAATCCCGAAGCTAGTGCATCAAAATCCATTGTGAAAGAGGAATCTGCCTCTTTTAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCTGATCTTGTAATGTATTTCAAGCATGCTCGTGCTACCTTATCCAAAAAAGGAGGGATATTTGTTATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGGTATAATTTTCTTAACTTCAAACTTCAGAAACTTAATTAAATTTGTTCTGGTGGACAAGTGCGTTTGCATTATAGATGCAGTCTTTGATTCTTAAGAGGCCACAAGTAGTACAACAAAGACAAACTTTTATTTTACTTTGGCATGAACTGGCGTAGATGATGGATGTATCACGTTGACCTAATCTAGTAAGTATTGAAGTCTCTCCTGGGTAGGCCTTCACTCAACAAACATCTTTTATCGAACTCACTTGACCCTAAAGTACACAATTTTTCAAACTTTAGCACCAAAGTTACCCACACCATTTTTTGTACCCCCTAGTGTATAATCATGTTGTTTAGTTGGATTCTTCAAATTGTATGATGACTGGACTGTCAAGACTCAAACGTGGAACTATTCTCTCGATAGGGAGAGTGCTCCATCCCAGAAATTTGTATAAAATATTGACTGAATCATTAGGCAGAAAGAGCAGGTGCTCTTCTTTTCCACCCCTCCTACACTAACTGTGGGAGACTAGAATCTCCTTTCTCAATAGTTTTGCTATGTTTTTTTCACTTCAGCTCGAAGATGTTAATTGTGGAGGTCTTTCATAGCCTTACCATAATGTAACAGTAAAATTTTAATTATTCAGACATTGTTTCCTTTCCTTATTTATGTTCTTCCGTTCACATGAAATGTATTAAACATGGCGAGATTTTGCATTCTAATTTGCTGGAAATATTGCAGTATATCTGGGAGCAAGCTGAATTTGACGTCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAAAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTGTGAGCAAATCTTTCTCTTTTCAATTACAACGCATTCCATATTTGGAAACCATTATTAACTCAAACCATTATGCCTAAACCTTGTCTAAATTTCATGAGCCATTTCATTATGCTATTTCGAATATCCAAAATCCTGAGATGACCATCGCAAATGTGAACAGGTGGTCATTACCCGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTTTGGATGCGACAGATGCCTGACACCGAAGAGATTAGAAGTATAGAGGGGTTTGGTGCAGGAAGTGAAGTGAAATACGAGGAAGTCGAAACTTTTCAACAAAAGGAATCTTGGAATGCGTATATTGTTGGTGTTTCATAGTTTTGAGCATCAATGATTCTATCAATACAATTTCAGGTTTGTCTCACTATTTTCGGCATTGGATTTCATGTCACTGTAGATAGTACATCCATAACTGCAGTGTTGTCTTTCTATAGAAAAAAATTGTAGTAGAACTAATAAGGGAGATAAGCTTTGTCAATGGAGGGATTTCAAGCTCATCCGATGCTTGTTAATGTTTTGTTTTTTATTTTTATAGTCTTGACTATGATCGTTCTAGTTTCCTCCAGTTTGCTTGTTGATTCCCCCCTCCCTTCAAGTTTCTCCTGATTCAAATTCCAATTCTTGAAATTGAACCTCC ATGGGAAAGGGAGACAAGAAGCAAAAACATCACGATCGACATTCTCGTCGAAGAGACTTCAAGTTTACTTCTGAAGGTGAAGTTATGGAAGATGGTGATTTCAACAGCCACCCCCTTCCCCAAGAAGAGGAACAAGAAGTAGAAGTAGAAGAAGAGGAACAAGAAACAAGCAATGAGGCCTCGTCAATGGATATTCCTTCCAAATTTCAACTCTATCAACAGTCTGTTCAGTCCCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTATGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTTTGTGGCACTGCACTTTTAAGTCTAGAATGGCTTCGAAGTGATTCACGTAGGACTGCTGTAGGATTGGATCTTGATCTTGAGGCATTAGTCTGGTGCATGGAGAACAATGTTAATCGAATTGGAGCTGATGGATTTTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGAGGTGGACCTGATTGACAATTTAACAATGGAAGATAGCAAAGATAATCCCGAAGCTAGTGCATCAAAATCCATTGTGAAAGAGGAATCTGCCTCTTTTAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCTGATCTTGTAATGTATTTCAAGCATGCTCGTGCTACCTTATCCAAAAAAGGAGGGATATTTGTTATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGTATATCTGGGAGCAAGCTGAATTTGACGTCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAAAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTGTGGTCATTACCCGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTTTGGATGCGACAGATGCCTGACACCGAAGAGATTAGAAGTATAGAGGGGTTTGGTGCAGGAAGTGAAGTGAAATACGAGGAAGTCGAAACTTTTCAACAAAAGGAATCTTGGAATGCGTATATTGTTGGTGTTTCATAG ATGGGAAAGGGAGACAAGAAGCAAAAACATCACGATCGACATTCTCGTCGAAGAGACTTCAAGTTTACTTCTGAAGGTGAAGTTATGGAAGATGGTGATTTCAACAGCCACCCCCTTCCCCAAGAAGAGGAACAAGAAGTAGAAGTAGAAGAAGAGGAACAAGAAACAAGCAATGAGGCCTCGTCAATGGATATTCCTTCCAAATTTCAACTCTATCAACAGTCTGTTCAGTCCCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTATGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTTTGTGGCACTGCACTTTTAAGTCTAGAATGGCTTCGAAGTGATTCACGTAGGACTGCTGTAGGATTGGATCTTGATCTTGAGGCATTAGTCTGGTGCATGGAGAACAATGTTAATCGAATTGGAGCTGATGGATTTTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGAGGTGGACCTGATTGACAATTTAACAATGGAAGATAGCAAAGATAATCCCGAAGCTAGTGCATCAAAATCCATTGTGAAAGAGGAATCTGCCTCTTTTAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCTGATCTTGTAATGTATTTCAAGCATGCTCGTGCTACCTTATCCAAAAAAGGAGGGATATTTGTTATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGTATATCTGGGAGCAAGCTGAATTTGACGTCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAAAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTGTGGTCATTACCCGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTTTGGATGCGACAGATGCCTGACACCGAAGAGATTAGAAGTATAGAGGGGTTTGGTGCAGGAAGTGAAGTGAAATACGAGGAAGTCGAAACTTTTCAACAAAAGGAATCTTGGAATGCGTATATTGTTGGTGTTTCATAG MGKGDKKQKHHDRHSRRRDFKFTSEGEVMEDGDFNSHPLPQEEEQEVEVEEEEQETSNEASSMDIPSKFQLYQQSVQSPKGDISYLQKFFLMYVGGRQPIHFQEDFCGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFHGNVLHPSEARLVNPEPEVDLIDNLTMEDSKDNPEASASKSIVKEESASFNDNKYLKRNITLAARDIVCAFNYSCCCLHSRADLVMYFKHARATLSKKGGIFVMDLYGGTSSEQKLKLQRKFANFKYIWEQAEFDVIGRKTRISLHFDLKKQQKKLRHAFSYSWRLWSLPEIKDCLEEAGFRSVHFWMRQMPDTEEIRSIEGFGAGSEVKYEEVETFQQKESWNAYIVGVS*
BLAST of Csa1G145870 vs. TrEMBL
Match: A0A0A0LSJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1) HSP 1 Score: 793.5 bits (2048), Expect = 1.2e-226 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Csa1G145870 vs. TrEMBL
Match: B9SCR5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1280080 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 1.5e-154 Identity = 270/397 (68.01%), Postives = 326/397 (82.12%), Query Frame = 1
BLAST of Csa1G145870 vs. TrEMBL
Match: A0A067KN65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07938 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 1.0e-153 Identity = 271/399 (67.92%), Postives = 320/399 (80.20%), Query Frame = 1
BLAST of Csa1G145870 vs. TrEMBL
Match: B9H1R7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s19510g PE=4 SV=2) HSP 1 Score: 548.5 bits (1412), Expect = 6.5e-153 Identity = 271/406 (66.75%), Postives = 325/406 (80.05%), Query Frame = 1
BLAST of Csa1G145870 vs. TrEMBL
Match: M5VYJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006882mg PE=4 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 5.2e-150 Identity = 266/396 (67.17%), Postives = 321/396 (81.06%), Query Frame = 1
BLAST of Csa1G145870 vs. TAIR10
Match: AT2G27590.1 (AT2G27590.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-136 Identity = 239/388 (61.60%), Postives = 295/388 (76.03%), Query Frame = 1
BLAST of Csa1G145870 vs. NCBI nr
Match: gi|449443392|ref|XP_004139461.1| (PREDICTED: uncharacterized protein LOC101220503 [Cucumis sativus]) HSP 1 Score: 793.5 bits (2048), Expect = 1.7e-226 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Csa1G145870 vs. NCBI nr
Match: gi|659071831|ref|XP_008462130.1| (PREDICTED: uncharacterized protein LOC103500556 [Cucumis melo]) HSP 1 Score: 761.1 bits (1964), Expect = 9.2e-217 Identity = 376/397 (94.71%), Postives = 383/397 (96.47%), Query Frame = 1
BLAST of Csa1G145870 vs. NCBI nr
Match: gi|255565589|ref|XP_002523784.1| (PREDICTED: uncharacterized protein LOC8271896 [Ricinus communis]) HSP 1 Score: 553.9 bits (1426), Expect = 2.2e-154 Identity = 270/397 (68.01%), Postives = 326/397 (82.12%), Query Frame = 1
BLAST of Csa1G145870 vs. NCBI nr
Match: gi|802600174|ref|XP_012072806.1| (PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas]) HSP 1 Score: 551.2 bits (1419), Expect = 1.4e-153 Identity = 271/399 (67.92%), Postives = 320/399 (80.20%), Query Frame = 1
BLAST of Csa1G145870 vs. NCBI nr
Match: gi|566167390|ref|XP_002306230.2| (hypothetical protein POPTR_0004s19510g [Populus trichocarpa]) HSP 1 Score: 548.5 bits (1412), Expect = 9.3e-153 Identity = 271/406 (66.75%), Postives = 325/406 (80.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|