CU168952 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU168952
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 9698693 .. 9699734 (+)
Sequence length239
The following sequences are available for this feature:

transcribed_cluster sequence

CACCTCAGGCTCAGGATTGACAAGCCTGGCTTCAGAAGGATGCAGTACATTTTCCAAGAAAAAGAGAGATTCTGGAAAATCCATCAGCTCCAATTCGATTAACATTGTTCTCCATGCACCAGACTAATGCCTCAAGATCAAGATCCAATCCTACAGCAGTCCTACGTGAATCACTTCGAAGCCATTCTAGACTTAGAAGTGCAGTGCCAACAAAAATCTTCTTGGAAATGGATCGGTTC
BLAST of CU168952 vs. TrEMBL
Match: A0A0A0LSJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-20
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLF G
Sbjct: 106 FCGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFHG 159

Query: 113 172
           
Sbjct: 166 159

Query: 173 215
           
Sbjct: 226 159

BLAST of CU168952 vs. TrEMBL
Match: A0A0A0LSJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1)

HSP 1 Score: 39.7 bits (91), Expect = 2.0e+00
Identity = 19/26 (73.08%), Postives = 19/26 (73.08%), Query Frame = -3

Query: 1   FPESLFFLENVLHPSEARLVNPEPEV 60
           F     F  NVLHPSEARLVNPEPEV
Sbjct: 151 FSRISLFHGNVLHPSEARLVNPEPEV 176

Query: 61  79
           
Sbjct: 211 176


HSP 2 Score: 99.0 bits (245), Expect = 2.8e-18
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVG+DLDLEAL WCMENN+NRIGADG+SRISLF G
Sbjct: 113 FCGTALLSTEWLRSDSRRTAVGVDLDLEALNWCMENNINRIGADGYSRISLFHG 166

Query: 113 172
           
Sbjct: 173 166

Query: 173 215
           
Sbjct: 233 166

BLAST of CU168952 vs. TrEMBL
Match: V4UDX5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028571mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-18
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVGLDLDLEAL WCMENN+N++GADG+SRISLF G
Sbjct: 121 FCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174

Query: 113 172
           
Sbjct: 181 174

Query: 173 215
           
Sbjct: 241 174

BLAST of CU168952 vs. TrEMBL
Match: A0A067F3J3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045407mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-18
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVGLDLDLEAL WCMENN+N++GADG+SRISLF G
Sbjct: 121 FCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174

Query: 113 172
           
Sbjct: 181 174

Query: 173 215
           
Sbjct: 241 174

BLAST of CU168952 vs. TrEMBL
Match: A0A061GZR1_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_041447 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-17
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLR+DSRRTAVGLDLDLEAL WC+ENN+N++GADG+SRISLF G
Sbjct: 108 FCGTALLSTEWLRTDSRRTAVGLDLDLEALQWCLENNINKVGADGYSRISLFHG 161

Query: 113 172
           
Sbjct: 168 161

Query: 173 215
           
Sbjct: 228 161

BLAST of CU168952 vs. NCBI nr
Match: gi|449443392|ref|XP_004139461.1| (PREDICTED: uncharacterized protein LOC101220503 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 6.5e-21
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLF G
Sbjct: 106 FCGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFHG 159

Query: 113 172
           
Sbjct: 166 159

Query: 173 215
           
Sbjct: 226 159

BLAST of CU168952 vs. NCBI nr
Match: gi|659071831|ref|XP_008462130.1| (PREDICTED: uncharacterized protein LOC103500556 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 6.5e-21
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLF G
Sbjct: 115 FCGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFHG 168

Query: 113 172
           
Sbjct: 175 168

Query: 173 215
           
Sbjct: 235 168

BLAST of CU168952 vs. NCBI nr
Match: gi|802600174|ref|XP_012072806.1| (PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas])

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-18
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVG+DLDLEAL WCMENN+NRIGADG+SRISLF G
Sbjct: 113 FCGTALLSTEWLRSDSRRTAVGVDLDLEALNWCMENNINRIGADGYSRISLFHG 166

Query: 113 172
           
Sbjct: 173 166

Query: 173 215
           
Sbjct: 233 166

BLAST of CU168952 vs. NCBI nr
Match: gi|985462652|ref|XP_015388756.1| (PREDICTED: uncharacterized protein LOC102616334 isoform X2 [Citrus sinensis])

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-18
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVGLDLDLEAL WCMENN+N++GADG+SRISLF G
Sbjct: 121 FCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174

Query: 113 172
           
Sbjct: 181 174

Query: 173 215
           
Sbjct: 241 174

BLAST of CU168952 vs. NCBI nr
Match: gi|567863220|ref|XP_006424264.1| (hypothetical protein CICLE_v10028571mg [Citrus clementina])

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-18
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = -2

Query: 53  FVGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMENNVNRIGADGFSRISLFLG 112
           F GTALLS EWLRSDSRRTAVGLDLDLEAL WCMENN+N++GADG+SRISLF G
Sbjct: 121 FCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174

Query: 113 172
           
Sbjct: 181 174

Query: 173 215
           
Sbjct: 241 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LSJ6_CUCSA1.7e-2096.30Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1[more]
A0A0A0LSJ6_CUCSA2.0e+0073.08Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1[more]
V4UDX5_9ROSI4.7e-1885.19Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028571mg PE=4 SV=1[more]
A0A067F3J3_CITSI4.7e-1885.19Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045407mg PE=4 SV=1[more]
A0A061GZR1_THECC1.4e-1781.48S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform... [more]
Match NameE-valueIdentityDescription
gi|449443392|ref|XP_004139461.1|6.5e-2196.30PREDICTED: uncharacterized protein LOC101220503 [Cucumis sativus][more]
gi|659071831|ref|XP_008462130.1|6.5e-2196.30PREDICTED: uncharacterized protein LOC103500556 [Cucumis melo][more]
gi|802600174|ref|XP_012072806.1|1.0e-1887.04PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas][more]
gi|985462652|ref|XP_015388756.1|1.8e-1885.19PREDICTED: uncharacterized protein LOC102616334 isoform X2 [Citrus sinensis][more]
gi|567863220|ref|XP_006424264.1|1.8e-1885.19hypothetical protein CICLE_v10028571mg [Citrus clementina][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G145870Csa1G145870gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0125154H0125154EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37211FAMILY NOT NAMEDcoord: 10..78
score: 7.9