Lsi03G000790 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTACTTGACTAAAAAGAAATTAGGGAGAGATTTTTGAGTAGAAAATTTGTAGCTGTGCGAAAACCCGAACGCAGTCCGGCGGCGGAAAAGGAGGGAAAATGGGAAAGCGAGACAAGAAGCAGAAACATCACGATGGACATTCTCGTCGAAGGGACTTCAAGTTTACTTCAGAAGGAGAAGTTATGGAAGATGGTGATTTCAACAGCTATCCCCTTCCCTCACCTTCTACAAGAGAACTAGAAGAAGAGGAAGAAGAAGTTGAAGAAGAAGTAGAAGAGGAAGAGGAGGAACAAGAAACAAGCCATGAGGGCTCATCAATGGATATTCCTTCGAAATTTCAACTCTATCAACAATCTGTTCAGGTTTAGCCCTTCTTCTTGCATTGCAACTCTAGTTCCCCCATGGTTATATGGAAATCATGTGAATATTTGAAAGAAACTATCATTTTCGATTTTTATAACTATTGGTATCGTGAATTTATGAATTTATTATTTGAGCTGATGAGTGTTGTATCGTTGATTGAGAGGTGGGGGATCTGGCTGTTTACTGAAATTTCTTTATTCTCTCAAGTCGCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTACGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTCTGTGGCACTGCACTTTTAAGGTATACCACTGTTTTCTTGCTGAGATATATTAACTCGTGAGTTTGAGGGGTTATTGAACAGGGCCAAATAGAAATTTGAGTAAACTCCATTTGGGGCCAGTTATTCGTTGAGGGGTGGTTGCAGATCATTGTGAATGTAGTAAGAAATGAAACACGTGTTCGTGGACAATTGTTATTATGATTATAGTTTATCTAATCAACAATTGTTATAATCATACTAAATCAATATTTAGGTTATCAATTATTGTTATCATCAATGATAATAGTTTATGATTAGGTTGTAATATGCATTGATGATGTAATTCCATGACATCCTGTTACCTCGACTCCATGCTTAGAATTTATTCATGGGGAAAAAGAAAGAACATGGTAGGAGTATTTGTCATTGCAATCACCAGTTAAATCCTCATGTCAAAAATTACTTATATATTTTTTTAATAAATATATTTCCTATAAGTTAGAGGGTTGGTTAACTTATTTTCAAAGATTGAGACCATCATGTATGGAATAGCTTGAGAATAGTTGAACTTGATTTGCCATTATCCTTTAGGCCTTGTCCTTTTGGACTAGACTCCCTTTCTCTATAGCTAGTTTGGAGTTGGGCATCTTGTTGGGCTGTTTTCTTATATTCTCTCGCAGTAGGTTTTCTGAGCTTTTTTTTTTCTTCATTTTTTGAAAAAGAAAGAATACTTCTACTTGACTTCATTATTCTTTTCAATTTCTATTTGTGAACAAGCTGGAGCCAATCCTGGAATTGCGAGTCATTTTGTTGTTGCTAGTTGGATGGATTAGAAATCTGATACTTATTACTTCCAACAGTTTAGAATGGCTTCGTAGTGATTCACGAAGGACTGCTGTAGGATTGGATCTTGACCTTGAGGCATTAGTCTGGTGCATGAAGAACAATTTTAACCGAACTGGGGCTGATGGATATTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGTGGAGGACCTGATTGAAAATTTAACATTGGAAGATAGCAAAGAAAATGCGGAAGCCAGTGCATCAAAATCCATTGTGAAAGAGAAATCTGCCTCTTATAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCAGATCTTGTTACGTATTTCAAGCATGCTCGTGCTAGCCTATCCAGAAAAGGTGGGATATTTGTCATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGGTATAATTTTCTTGAGTTCAAACTTCAGAAACCTAATATATTTGTTCTGTTGGAAACTTGGAAAAGTGCGTGTGCATCATTTATGCAGTCCTTGATTCTCTTATGAGGCCACAATGACTACAACAAAAATGAACTTTTATTATACTTTGAGTGTAGATGATGGATTTATTACGTTGACTTAATCTAATAAGTATTAAATTCTCTTCTGGGTGGCCTTAAAAGGAGAAGGAAGACTAAAATGTCAATAGGCGTTTATTCTTGATTTTATTTTAATTTTGTCTCTTTGAGTACAACCATGGGAGTGGGGAAGTTCGAACCTTTGATCTCTTGGTCAAGAGTGTATGTCTTATGCTAGTTGAATTATGCTCATATTTATTATAGAATTCACTTTACCTCGTAGTACCCATTTTTTGAACCTTTTAACACCAAAGTTACCAAACACCATTTTTTCTACCCCAAGTGTATGATCATGTTATCTAGTTGCATTCTTCAAATTCTATGATGACTGAACTGACAGGGCTCAAACATGGAACTATTCTCTTGATAGGCAGAGTGCTCCATCCCAAAAATTTGTATAAAATTTTGACGAAATCAGTAGGCACTAGGCAGAAAGAGCAGGCCTCTTTTTTTCCACCCCTCCTACACAACCAGTTGCAAAGCAGAAGCTCCTTTCCCAATAGTTTTGCTATGTTTTTTTCACCTCAGGTCAAAGATATTAATTGTGGAGGTCTTTCATTGCCTTGCTAAAATATAAATAGTAAAATACTATTAATACTTACATATATAACCTCCTTTTCTTTCCCGATCTGTTCACTTTTTAAATTAGAGGTATCCATCCAAACATTGTTTATCTTCTTTATTTCTGTTGGAATTCTCTTCCCATGAAATGTAAAAAAGATGGTGAGATTTTGTGTTCTAATTTGTTGGAAATATTGCAGTATATCTGGGAGCAAGCTGAATTTGACATCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAGAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTGTAAGGAAATCTGTTCTCTTTTCAATTACAACACATTCCATATTTGTATACTGTGAGAATACTAGTTAATGGTATATTTGTTAATGGTATATTGGTAAGATTAGTAGGATATTAATAAGGGGTTGTTAGGTATCCAAACTACCTTGCACTCAGGAAAACCCACCAAAGACAAATGTAGTGCAAAAGATGGAGCTTAGAGCTCACTTCACTGGTATTAAGAGCAAATAGTAATGTCCACAAACAGTAACTAAGAAATATATGCTAAAAGAGCAAAGATGGAATGTCTGAGTAAAGAAAAGAGAATTCAAGAAAACACTCCAGCACTTTAGAGAGAGCTGGTCATCCTCTCCTTCCCAATTAGGGCCTGCTCAAAGCTCTCACTCCCAAGATGATTTGCCTGCTCTTTCTCCTTCCTCATTTATCCCTTCATAGTGGTCCCCACGGCTAACCGAATCATCTTTCTTCCCTTTACTTCCATTTCCACCCTCGGCTACTTTCCCCATTTTACCCTTCCTTTTATACGTATATATCACTGGGGGTCTAACAGGGGTATTATGGGTGTTTAGTGAGTGGTGTCTTAGATATAAATAGGAGGAGTTGGGCACCTTAGAGGGCAGATCATTTTGGTAGGAATTTTCATTGTGTGAATATAGAGAGAGATAACCCTCTCGATAGGCAATATAAATATAGATCTATCTTGATGTTCTGTGTGTTTTTTTAAGTATTCTTGTTAGGTGGTATCCTAATATAAACCATAATTAACTCAAAACGTTAGGCAAAAATTTGAAACTATACCTCATCTAAATTTCATGAACCATTACTTTATGCTATTTCTAGTGTCCAAAATCTTGAGATGACCATTGCACATGTGAACAGGTGGTCATTACCTGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTCTGGATCCGGCAGATGCCCGACACCGAAGAGATTAGAAGTACAGAGGGGTTTGGCGCAGGAAGTGAAGTGAAATACGAGGAAGTTGAAACTTTTCAACAAAAAGATTCTTGGAATGCATACATCGTTGGTGTTTTATAG CATTACTTGACTAAAAAGAAATTAGGGAGAGATTTTTGAGTAGAAAATTTGTAGCTGTGCGAAAACCCGAACGCAGTCCGGCGGCGGAAAAGGAGGGAAAATGGGAAAGCGAGACAAGAAGCAGAAACATCACGATGGACATTCTCGTCGAAGGGACTTCAAGTTTACTTCAGAAGGAGAAGTTATGGAAGATGGTGATTTCAACAGCTATCCCCTTCCCTCACCTTCTACAAGAGAACTAGAAGAAGAGGAAGAAGAAGTTGAAGAAGAAGTAGAAGAGGAAGAGGAGGAACAAGAAACAAGCCATGAGGGCTCATCAATGGATATTCCTTCGAAATTTCAACTCTATCAACAATCTGTTCAGTCGCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTACGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTCTGTGGCACTGCACTTTTAAGTTTAGAATGGCTTCGTAGTGATTCACGAAGGACTGCTGTAGGATTGGATCTTGACCTTGAGGCATTAGTCTGGTGCATGAAGAACAATTTTAACCGAACTGGGGCTGATGGATATTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGTGGAGGACCTGATTGAAAATTTAACATTGGAAGATAGCAAAGAAAATGCGGAAGCCAGTGCATCAAAATCCATTGTGAAAGAGAAATCTGCCTCTTATAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCAGATCTTGTTACGTATTTCAAGCATGCTCGTGCTAGCCTATCCAGAAAAGGTGGGATATTTGTCATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGTATATCTGGGAGCAAGCTGAATTTGACATCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAGAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTTGTCCAAAATCTTGAGATGACCATTGCACATGTGAACAGGTGGTCATTACCTGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTCTGGATCCGGCAGATGCCCGACACCGAAGAGATTAGAAGTACAGAGGGGTTTGGCGCAGGAAGTGAAGTGAAATACGAGGAAGTTGAAACTTTTCAACAAAAAGATTCTTGGAATGCATACATCGTTGGTGTTTTATAG ATGGGAAAGCGAGACAAGAAGCAGAAACATCACGATGGACATTCTCGTCGAAGGGACTTCAAGTTTACTTCAGAAGGAGAAGTTATGGAAGATGGTGATTTCAACAGCTATCCCCTTCCCTCACCTTCTACAAGAGAACTAGAAGAAGAGGAAGAAGAAGTTGAAGAAGAAGTAGAAGAGGAAGAGGAGGAACAAGAAACAAGCCATGAGGGCTCATCAATGGATATTCCTTCGAAATTTCAACTCTATCAACAATCTGTTCAGTCGCCCAAAGGAGACATAAGCTATTTGCAGAAGTTCTTTCTAATGTACGTGGGTGGTAGGCAACCGATCCATTTCCAAGAAGATTTCTGTGGCACTGCACTTTTAAGTTTAGAATGGCTTCGTAGTGATTCACGAAGGACTGCTGTAGGATTGGATCTTGACCTTGAGGCATTAGTCTGGTGCATGAAGAACAATTTTAACCGAACTGGGGCTGATGGATATTCCAGAATCTCTCTTTTTCATGGAAATGTACTGCATCCTTCTGAAGCCAGGCTTGTCAATCCTGAGCCTGTGGAGGACCTGATTGAAAATTTAACATTGGAAGATAGCAAAGAAAATGCGGAAGCCAGTGCATCAAAATCCATTGTGAAAGAGAAATCTGCCTCTTATAACGATAACAAGTATTTGAAGAGGAACATTACATTGGCTGCCAGAGATATTGTGTGCGCATTTAACTACAGCTGTTGTTGTCTCCATTCACGTGCAGATCTTGTTACGTATTTCAAGCATGCTCGTGCTAGCCTATCCAGAAAAGGTGGGATATTTGTCATGGATTTGTATGGTGGTACCTCGTCAGAACAGAAGTTGAAGCTTCAAAGGAAATTTGCTAATTTTAAGTATATCTGGGAGCAAGCTGAATTTGACATCATTGGACGTAAAACGAGGATTAGCCTCCATTTTGATCTTAAGAAGCAGCAGAAGAAGCTTCGCCATGCATTTTCATACAGCTGGAGACTTGTCCAAAATCTTGAGATGACCATTGCACATGTGAACAGGTGGTCATTACCTGAGATCAAAGACTGCTTGGAAGAGGCTGGATTCAGATCTGTCCATTTCTGGATCCGGCAGATGCCCGACACCGAAGAGATTAGAAGTACAGAGGGGTTTGGCGCAGGAAGTGAAGTGAAATACGAGGAAGTTGAAACTTTTCAACAAAAAGATTCTTGGAATGCATACATCGTTGGTGTTTTATAG MGKRDKKQKHHDGHSRRRDFKFTSEGEVMEDGDFNSYPLPSPSTRELEEEEEEVEEEVEEEEEEQETSHEGSSMDIPSKFQLYQQSVQSPKGDISYLQKFFLMYVGGRQPIHFQEDFCGTALLSLEWLRSDSRRTAVGLDLDLEALVWCMKNNFNRTGADGYSRISLFHGNVLHPSEARLVNPEPVEDLIENLTLEDSKENAEASASKSIVKEKSASYNDNKYLKRNITLAARDIVCAFNYSCCCLHSRADLVTYFKHARASLSRKGGIFVMDLYGGTSSEQKLKLQRKFANFKYIWEQAEFDIIGRKTRISLHFDLKKQQKKLRHAFSYSWRLVQNLEMTIAHVNRWSLPEIKDCLEEAGFRSVHFWIRQMPDTEEIRSTEGFGAGSEVKYEEVETFQQKDSWNAYIVGVL
BLAST of Lsi03G000790 vs. TrEMBL
Match: A0A0A0LSJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145870 PE=4 SV=1) HSP 1 Score: 706.4 bits (1822), Expect = 2.0e-200 Identity = 359/411 (87.35%), Postives = 375/411 (91.24%), Query Frame = 1
BLAST of Lsi03G000790 vs. TrEMBL
Match: B9SCR5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1280080 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 5.6e-147 Identity = 275/411 (66.91%), Postives = 326/411 (79.32%), Query Frame = 1
BLAST of Lsi03G000790 vs. TrEMBL
Match: A0A067KN65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07938 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 9.6e-147 Identity = 275/412 (66.75%), Postives = 325/412 (78.88%), Query Frame = 1
BLAST of Lsi03G000790 vs. TrEMBL
Match: I1LRE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G087800 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 8.2e-146 Identity = 271/412 (65.78%), Postives = 315/412 (76.46%), Query Frame = 1
BLAST of Lsi03G000790 vs. TrEMBL
Match: B9H1R7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s19510g PE=4 SV=2) HSP 1 Score: 521.9 bits (1343), Expect = 6.9e-145 Identity = 279/419 (66.59%), Postives = 325/419 (77.57%), Query Frame = 1
BLAST of Lsi03G000790 vs. TAIR10
Match: AT2G27590.1 (AT2G27590.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 460.3 bits (1183), Expect = 1.2e-129 Identity = 246/411 (59.85%), Postives = 302/411 (73.48%), Query Frame = 1
BLAST of Lsi03G000790 vs. NCBI nr
Match: gi|659071831|ref|XP_008462130.1| (PREDICTED: uncharacterized protein LOC103500556 [Cucumis melo]) HSP 1 Score: 734.9 bits (1896), Expect = 7.4e-209 Identity = 374/411 (91.00%), Postives = 386/411 (93.92%), Query Frame = 1
BLAST of Lsi03G000790 vs. NCBI nr
Match: gi|449443392|ref|XP_004139461.1| (PREDICTED: uncharacterized protein LOC101220503 [Cucumis sativus]) HSP 1 Score: 706.4 bits (1822), Expect = 2.8e-200 Identity = 359/411 (87.35%), Postives = 375/411 (91.24%), Query Frame = 1
BLAST of Lsi03G000790 vs. NCBI nr
Match: gi|255565589|ref|XP_002523784.1| (PREDICTED: uncharacterized protein LOC8271896 [Ricinus communis]) HSP 1 Score: 528.9 bits (1361), Expect = 8.1e-147 Identity = 275/411 (66.91%), Postives = 326/411 (79.32%), Query Frame = 1
BLAST of Lsi03G000790 vs. NCBI nr
Match: gi|802600174|ref|XP_012072806.1| (PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas]) HSP 1 Score: 528.1 bits (1359), Expect = 1.4e-146 Identity = 275/412 (66.75%), Postives = 325/412 (78.88%), Query Frame = 1
BLAST of Lsi03G000790 vs. NCBI nr
Match: gi|356542740|ref|XP_003539823.1| (PREDICTED: uncharacterized protein LOC100801710 [Glycine max]) HSP 1 Score: 525.0 bits (1351), Expect = 1.2e-145 Identity = 271/412 (65.78%), Postives = 315/412 (76.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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