Csa1G132150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G132150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHistone H2B; contains IPR000558 (Histone H2B), IPR009072 (Histone-fold)
LocationChr1 : 9433893 .. 9434756 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGTAATCCATTACTCGCATCTAAGAAATCCCATCTTCGATAAAACCTCCAAATTCCTTAGTTATATTTAGCAATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAGATTCATAGATTTTAGGGTTTTCTCGTGTAAAAAAGCAGGATCACTTGTTCTGGATCGTGGATTTCTTTTCCTTTTGTTGCATATTTTGGAATTGAATGAATGAAAATCGGTTTACATAACCCGAATTCTTTTGCAAATTGCTTGATCCTGTACACATCGTTCTGATTGTTTGCTTGACGGTCTCTGGAGATTGACCATAATTTCACATAAACAAGTTTTTATGCCTGAGATTGAATCTGACTTCAATTAGTATTTTAGGTTTGTTGCTTTTCAATGGTACAGGAAGAAGACATTGATTCAGTGCCGATGAATGTGTTTCAAAGTTTTTCTCTTAGCTCATGTTCTAGCGTGAATCCTTT

mRNA sequence

ATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAG

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Homology
[Close]
BLAST of Csa1G132150 vs. Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-65
Identity = 130/145 (89.66%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAS---DKKKKRAKKSIETYKI 60
           MAPKAEKKPAEKKP  E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPGELAKHAVSEGTKAVTKFTSS 143
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]
BLAST of Csa1G132150 vs. Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-65
Identity = 131/147 (89.12%), Postives = 135/147 (91.84%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKK-AEKAPAEKKPRAEKKLPKD----ASDKKKKRAKKSIETY 60
           MAPKAEKKPAEKKPA E+K  AEKAPAEKKP+A KKLPK+    A DKKKKR KKS+ETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 120
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 143
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]
BLAST of Csa1G132150 vs. Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-64
Identity = 131/150 (87.33%), Postives = 135/150 (90.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKAPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAPKAEKKPAEKKPA+E+      KAEKAPAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132150 vs. Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKK--AEKAPAEKKPRAEKKLPKD----ASDKKKKRAKKSIET 60
           MAPK EKKPAEKKPA E+K   AEKAPAEKKP+A KKLPK+    A +KKKKR+KKS+ET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132150 vs. Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-64
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKAPAEKKPRAEKKLP-KDASDKKKKRAKKSIET 60
           MAP+AEKKPAEKK AAE      K AEKAPAEKKP+A KKLP K+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132150 vs. TrEMBL
Match: A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132150 vs. TrEMBL
Match: A0A0A0LST8_CUCSA (Histone H2B OS=Cucumis sativus GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132150 vs. TrEMBL
Match: A0A0D2SV51_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104400 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-67
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEKAPAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132150 vs. TrEMBL
Match: A0A0D2NPV9_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104600 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.6e-67
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKA+KAPAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKADKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132150 vs. TrEMBL
Match: A0A0D2S0C9_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104500 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.6e-67
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEKAPAEKKPRAEKKLPK+A DK+KKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKRKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132150 vs. TAIR10
Match: AT3G46030.1 (AT3G46030.1 Histone superfamily protein)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-66
Identity = 130/145 (89.66%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAS---DKKKKRAKKSIETYKI 60
           MAPKAEKKPAEKKP  E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPGELAKHAVSEGTKAVTKFTSS 143
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]
BLAST of Csa1G132150 vs. TAIR10
Match: AT1G07790.1 (AT1G07790.1 Histone superfamily protein)

HSP 1 Score: 246.5 bits (628), Expect = 9.8e-66
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKAPAEKKPRAEKKLP-KDASDKKKKRAKKSIET 60
           MAP+AEKKPAEKK AAE      K AEKAPAEKKP+A KKLP K+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132150 vs. TAIR10
Match: AT5G59910.1 (AT5G59910.1 Histone superfamily protein)

HSP 1 Score: 246.5 bits (628), Expect = 9.8e-66
Identity = 131/150 (87.33%), Postives = 135/150 (90.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKAPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAPKAEKKPAEKKPA+E+      KAEKAPAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132150 vs. TAIR10
Match: AT3G45980.1 (AT3G45980.1 Histone superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 1.7e-65
Identity = 131/150 (87.33%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKAPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAP+AEKKPAEKKPAAE+      KAEKAPAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132150 vs. TAIR10
Match: AT2G28720.1 (AT2G28720.1 Histone superfamily protein)

HSP 1 Score: 242.7 bits (618), Expect = 1.4e-64
Identity = 131/151 (86.75%), Postives = 133/151 (88.08%), Query Frame = 1 

Query: 1   MAPKA-----EKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAS----DKKKKRAKKS 60
           MAPKA     EKKPAEK PA EEK AEKAPAEKKP+A KKLPK+A     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]
BLAST of Csa1G132150 vs. NCBI nr
Match: gi|778659255|ref|XP_011654070.1| (PREDICTED: histone H2B.7 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132150 vs. NCBI nr
Match: gi|449443375|ref|XP_004139453.1| (PREDICTED: histone H2B.7-like [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132150 vs. NCBI nr
Match: gi|823172029|ref|XP_012484994.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-67
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEKAPAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132150 vs. NCBI nr
Match: gi|823172056|ref|XP_012485001.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKA+KAPAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKADKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132150 vs. NCBI nr
Match: gi|823172032|ref|XP_012484995.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEKAPAEKKPRAEKKLPK+A DK+KKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKRKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

The following BLAST results are available for this feature:
BLAST of Csa1G132150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H2B7_ARATH2.1e-6589.66Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3[more]
H2B_GOSHI6.0e-6589.12Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3[more]
H2B11_ARATH1.7e-6487.33Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5[more]
H2B1_MEDTR1.7e-6487.84Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3[more]
H2B1_ARATH1.7e-6488.51Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3[more]
BLAST of Csa1G132150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV55_CUCSA3.9e-71100.00Histone H2B OS=Cucumis sativus GN=Csa_1G132130 PE=3 SV=1[more]
A0A0A0LST8_CUCSA1.1e-7099.30Histone H2B OS=Cucumis sativus GN=Csa_1G132680 PE=3 SV=1[more]
A0A0D2SV51_GOSRA1.2e-6796.48Histone H2B OS=Gossypium raimondii GN=B456_006G104400 PE=3 SV=1[more]
A0A0D2NPV9_GOSRA2.6e-6795.77Histone H2B OS=Gossypium raimondii GN=B456_006G104600 PE=3 SV=1[more]
A0A0D2S0C9_GOSRA2.6e-6795.77Histone H2B OS=Gossypium raimondii GN=B456_006G104500 PE=3 SV=1[more]
BLAST of Csa1G132150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46030.11.2e-6689.66 Histone superfamily protein[more]
AT1G07790.19.8e-6688.51 Histone superfamily protein[more]
AT5G59910.19.8e-6687.33 Histone superfamily protein[more]
AT3G45980.11.7e-6587.33 Histone superfamily protein[more]
AT2G28720.11.4e-6486.75 Histone superfamily protein[more]
BLAST of Csa1G132150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778659255|ref|XP_011654070.1|5.6e-71100.00PREDICTED: histone H2B.7 [Cucumis sativus][more]
gi|449443375|ref|XP_004139453.1|1.6e-7099.30PREDICTED: histone H2B.7-like [Cucumis sativus][more]
gi|823172029|ref|XP_012484994.1|1.7e-6796.48PREDICTED: histone H2B-like [Gossypium raimondii][more]
gi|823172056|ref|XP_012485001.1|3.8e-6795.77PREDICTED: histone H2B-like [Gossypium raimondii][more]
gi|823172032|ref|XP_012484995.1|3.8e-6795.77PREDICTED: histone H2B-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU100317cucumber EST collection version 3.0transcribed_cluster
CU100540cucumber EST collection version 3.0transcribed_cluster
CU102059cucumber EST collection version 3.0transcribed_cluster
CU105262cucumber EST collection version 3.0transcribed_cluster
CU108184cucumber EST collection version 3.0transcribed_cluster
CU120873cucumber EST collection version 3.0transcribed_cluster
CU174996cucumber EST collection version 3.0transcribed_cluster
CU176952cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G132150.1Csa1G132150.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU100540CU100540transcribed_cluster
CU108184CU108184transcribed_cluster
CU102059CU102059transcribed_cluster
CU100317CU100317transcribed_cluster
CU120873CU120873transcribed_cluster
CU105262CU105262transcribed_cluster
CU174996CU174996transcribed_cluster
CU176952CU176952transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 126..139
score: 5.3E-49coord: 74..94
score: 5.3E-49coord: 96..113
score: 5.3E-49coord: 113..126
score: 5.3E-49coord: 55..73
score: 5.3
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 13..142
score: 1.2E
IPR000558Histone H2BSMARTSM00427h2b3coord: 45..141
score: 1.1
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 110..132
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 5..118
score: 9.8
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 22..142
score: 1.9
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 27..142
score: 1.29

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G132150Melon (DHL92) v3.5.1cumeB015
Csa1G132150Watermelon (Charleston Gray)cuwcgB014
Csa1G132150Watermelon (97103) v1cuwmB054
Csa1G132150Cucurbita pepo (Zucchini)cpecuB516
Csa1G132150Cucurbita pepo (Zucchini)cpecuB805
Csa1G132150Bottle gourd (USVL1VR-Ls)culsiB044
Csa1G132150Cucumber (Gy14) v2cgybcuB001
Csa1G132150Melon (DHL92) v3.6.1cumedB010
Csa1G132150Silver-seed gourdcarcuB0185
Csa1G132150Watermelon (97103) v2cuwmbB002
Csa1G132150Wax gourdcuwgoB049
Csa1G132150Cucumber (Gy14) v1cgycuB305
Csa1G132150Cucurbita maxima (Rimu)cmacuB163
Csa1G132150Cucurbita maxima (Rimu)cmacuB203
Csa1G132150Cucurbita moschata (Rifu)cmocuB148
Csa1G132150Cucurbita moschata (Rifu)cmocuB188