Csa1G077140 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAGACGAGGATCGAGATGAGATCTTATATATATATATATATATATTCTCTTTAGGGATTTTAAAATAAAGAAGTGTATGGAAATTTGATTAATAAAACTTTGTCAGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGGCAAATTACTTCTCCTTACTTTTTATTTTTCGAATAAGGATAATTTTATTTCCATTCTTAAAATTTAAAAATGTTACAACATAATTTTTAATTTACTTTTTTATAAAAATGGAATACTATCCATTTCTCCCTAAATTTTAGCCTTAGTTTCTTAAGTTTTAAAATTTTACCTTCCTAAAATTTTGACGTTTGTTCTAACTTTAGATATCTAAATTTCAAAGTTTAATTTATATTTTTAGTTATACTAATTAATTTAAATGAATTAGAAGAAGTATAATATGTTAAGATTCACAGTTAAAATTATATTTCGTACATTTTAAATTAGTTAAAGGAAATATTTAAAAAACTTAAATTTCAGAGAGAAAATAATCTATTGATGTCTGTAATTTTTTGAAAAAAAGAAAAAGGAGTTTGAGCTATATTAAAATAGAAGAAAATAATAAAACTGATTTGTATGATTTTGATGGGATATTATTATTATTAAAGCAAAAGTTTGAATTAATAGTGTAAATTGACAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGGTATTCTTCTTCTTTTCTTTTTATATTTCTTCATTACAATATTTCCTTTTTTCTTTCATTTTAATTGAAGTTTTTTTGTTTTTTTTATTTTTTGTTGGTTTTAAGATTTGGTTTAACAATTTTTAGAAAGTGGATTATTATGTGCAATAAACATAAGTGTTAAATAGGACAGGCTAGATTATTATCAACCAAATCTTTATACAAAATATATCCCCGTTTTTGGAGGTCTTAAAATTATTGTTTCTTTAGTCTTTAAAAATGTTGATTTAGAACTCAAAAATCATTTTGTATGTGTGTATATATAATTTAGAAAATTTAAAAAAAATGTAAATTTGGGTTTTTTTATAAGAAGATTAGTGTAGTTGAGCTAATATAATGTTTTAAGTTATAGATATCAACTTTGGTTCAATTTTACATGTATTAAGAAAATGAAATTTGAAAATGAGTAAGTTTCACTTTATTAAAATCTCTAAAAATCGTATAAATTCAAATATAGATTAATATAACAAAATGAGTTTTTAGTTCACCAACACGTAAGAGAAGTTCTAACATCTTCTCTTCAATAATCTTGAATGTCTAAACTAGTTAAGGTCGTTATGTTCTTCACGTTATTGTCACTCATTATCCATATGATAATTGTTTACTATTATTATTTTGATTATAATTAATTTTGGTATTGTTATTGTGTTACAAAATGTAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGTAAATATCTCTAAATTTTCATCTTCATACTTCTTCAAGACTTTTCTTTAAAATTCCTATAATAATCAACCATCATTCTCAAAATATACTCTCTTTTTTTTCTTCTCTTCATAGAAAAAACAATTTTCTACCTATTTTCAACATATGCATATTGAACTAAGTGCAATCAATAAATTTTTAGTTTATTTACTGAAAATTATATTGTAAAAATTACTTCAAATCGTATATTAATAATATGTAATTATATCCTCAATTTTTATTTACAAACTTTGAGCCTCTTATGTTAAATTTGACCATCTAATTGTATAAATGGTACAAAGTAAGTTTTGAGATTCAATTTTATATCATTGAAGATCGACGATTTTAAGGTGTAATAATTGCAATTACCCGAGTCGATTTTAAATCTTAATTTTAAAAGAAAATTCCAAATAAATCACCCAAAAAAAAGTCTGACCAAACAAAATATTCCAAAAGCAGGTAGCTAGAAAAATGCTCAAAACCAAAAACAAATGTCTAATCCAATACCAAAATGTCTAAAATCCAACAAAAAAACAAACACTCAATATACCTACAAAAGGCACCCACAAAATTACCATCTCTTAAATAGTAATAATATGGAAAATTTTCATTTTTTTAATCTTTATATTAAATCAAAAATAAATATAAAAAAATCAATTCAATTCTAAACTTAGAATAAATGGTATCATTACTAATTTTCTAAAATTGTTAAAAAAAACTAATCCCTAATTAATTACTTAAATCAAAATCATTAAGATACCTATACTCTTTTCCTTTTAAAATATTTGGGATTTTATTCCTTTGTTTTCTAGAACCATTACTTTAACTAATTTTATGATTACTTTCTAGTTCTATGTTTTTCTAAAACGAATGAGTTGTTAGGAGTATTAATTTCAAACCATACGTAATATTAATTTATTTTAAGACTCTTGTACTTTTAGCTTTGGTATATTTTGATAAATATATGTTTATTTTGAATTCTTGGTCATTGTACTTCTAAAAAGTAACCGTTTATGTTCCTATACTATCATTGTTAAGGAAAATAAAATACAACTTTCTCAAAGTACAACACTAAAATGGACCAAAATTGAAAGTTAGGGACAAAGTAGCATTCAAACCTAAAATAAGAAGGGATAAAGATTTTCCTCAAGAAGAAAAGGTGATATATTTAAGGGTAATATATACGCGTGTGTGTGTGTGTATGAAGAGGGCAAAAGAGAAAATTCACAGGTGTGAAATTATTTTGAAAGGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAATGTTGTTTGTTCTGAAGGAATTAAAAAGCCTTGACAAAGAGATATTTCAAAGATGTTTGTAACCGAAAAAAATATACATACATACACGATTTAAGGCTCTCAATTTCCTATATTAATTTAGTTGTAGACTACCTGTAGTTTTA ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAA ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAA MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHQHTSSPHTNSTSTAATTTTHPLSLNPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEESHREEANNNNNNNIIEKMRVENNIMGTKDSSSSSSSSMETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKGNREVGMISSGAGSEAEAEAEGIDLNLKL*
BLAST of Csa1G077140 vs. Swiss-Prot
Match: Y1940_ATV (Protein ORF1940 OS=Acidianus two-tailed virus PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06 Identity = 25/45 (55.56%), Postives = 26/45 (57.78%), Query Frame = 1
HSP 2 Score: 35.0 bits (79), Expect = 2.2e+00 Identity = 19/56 (33.93%), Postives = 23/56 (41.07%), Query Frame = 1
BLAST of Csa1G077140 vs. Swiss-Prot
Match: ZFHX4_CHICK (Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 5.9e-06 Identity = 36/105 (34.29%), Postives = 46/105 (43.81%), Query Frame = 1
HSP 2 Score: 43.1 bits (100), Expect = 8.0e-03 Identity = 22/48 (45.83%), Postives = 24/48 (50.00%), Query Frame = 1
HSP 3 Score: 39.7 bits (91), Expect = 8.8e-02 Identity = 20/44 (45.45%), Postives = 24/44 (54.55%), Query Frame = 1
BLAST of Csa1G077140 vs. TrEMBL
Match: A0A0A0LSF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077140 PE=4 SV=1) HSP 1 Score: 796.6 bits (2056), Expect = 1.4e-227 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Csa1G077140 vs. TrEMBL
Match: A0A0U0ZU22_9MYCO (Putative membrane protein, MmpS family OS=Mycobacterium abscessus GN=A3O06_10240 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.3e-07 Identity = 50/156 (32.05%), Postives = 65/156 (41.67%), Query Frame = 1
BLAST of Csa1G077140 vs. TrEMBL
Match: R4UCN1_9MYCO (MmpS family protein OS=Mycobacterium abscessus subsp. bolletii 50594 GN=MASS_1951 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.3e-07 Identity = 50/156 (32.05%), Postives = 65/156 (41.67%), Query Frame = 1
BLAST of Csa1G077140 vs. TrEMBL
Match: A0A0U1AIZ5_9MYCO (Putative membrane protein, MmpS family OS=Mycobacterium abscessus GN=ERS075547_03935 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.3e-07 Identity = 50/156 (32.05%), Postives = 65/156 (41.67%), Query Frame = 1
BLAST of Csa1G077140 vs. TrEMBL
Match: A0A0S3E7T2_9MYCO (Membrane protein OS=Mycobacterium saopaulense GN=MYCSP_08575 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 49/156 (31.41%), Postives = 66/156 (42.31%), Query Frame = 1
BLAST of Csa1G077140 vs. TAIR10
Match: AT1G31810.1 (AT1G31810.1 Formin Homology 14) HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06 Identity = 28/72 (38.89%), Postives = 33/72 (45.83%), Query Frame = 1
HSP 2 Score: 48.5 bits (114), Expect = 1.1e-05 Identity = 30/73 (41.10%), Postives = 34/73 (46.58%), Query Frame = 1
HSP 3 Score: 48.5 bits (114), Expect = 1.1e-05 Identity = 40/126 (31.75%), Postives = 52/126 (41.27%), Query Frame = 1
HSP 4 Score: 45.1 bits (105), Expect = 1.2e-04 Identity = 25/62 (40.32%), Postives = 27/62 (43.55%), Query Frame = 1
HSP 5 Score: 43.9 bits (102), Expect = 2.6e-04 Identity = 28/84 (33.33%), Postives = 35/84 (41.67%), Query Frame = 1
HSP 6 Score: 40.0 bits (92), Expect = 3.8e-03 Identity = 26/63 (41.27%), Postives = 27/63 (42.86%), Query Frame = 1
HSP 7 Score: 39.3 bits (90), Expect = 6.5e-03 Identity = 19/48 (39.58%), Postives = 22/48 (45.83%), Query Frame = 1
HSP 8 Score: 39.3 bits (90), Expect = 6.5e-03 Identity = 20/50 (40.00%), Postives = 25/50 (50.00%), Query Frame = 1
BLAST of Csa1G077140 vs. NCBI nr
Match: gi|700209617|gb|KGN64713.1| (hypothetical protein Csa_1G077140 [Cucumis sativus]) HSP 1 Score: 796.6 bits (2056), Expect = 2.0e-227 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Csa1G077140 vs. NCBI nr
Match: gi|659068150|ref|XP_008443003.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo]) HSP 1 Score: 683.7 bits (1763), Expect = 1.9e-193 Identity = 346/394 (87.82%), Postives = 359/394 (91.12%), Query Frame = 1
BLAST of Csa1G077140 vs. NCBI nr
Match: gi|778664946|ref|XP_011648446.1| (PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus]) HSP 1 Score: 494.6 bits (1272), Expect = 1.6e-136 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of Csa1G077140 vs. NCBI nr
Match: gi|515772754|ref|WP_017205354.1| (membrane protein [Mycobacterium abscessus]) HSP 1 Score: 68.2 bits (165), Expect = 3.7e-08 Identity = 50/152 (32.89%), Postives = 65/152 (42.76%), Query Frame = 1
BLAST of Csa1G077140 vs. NCBI nr
Match: gi|530640164|ref|XP_005306853.1| (PREDICTED: zinc finger homeobox protein 4, partial [Chrysemys picta bellii]) HSP 1 Score: 64.7 bits (156), Expect = 4.1e-07 Identity = 43/114 (37.72%), Postives = 54/114 (47.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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