CU169753 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU169753
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7869441 .. 7870162 (-)
Sequence length202
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTA
BLAST of CU169753 vs. TrEMBL
Match: A0A0A0LSF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077140 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.9e-17
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 2

Query: 2   GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEEA 61
           GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEE+
Sbjct: 176 GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEES 219

Query: 62  121
           
Sbjct: 236 219

Query: 122 134
           
Sbjct: 296 219

BLAST of CU169753 vs. NCBI nr
Match: gi|778664946|ref|XP_011648446.1| (PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-16
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 2

Query: 2   GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEEA 61
           GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEE+
Sbjct: 176 GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEES 219

Query: 62  121
           
Sbjct: 236 219

Query: 122 134
           
Sbjct: 296 219

BLAST of CU169753 vs. NCBI nr
Match: gi|700209617|gb|KGN64713.1| (hypothetical protein Csa_1G077140 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-16
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 2

Query: 2   GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEEA 61
           GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEE+
Sbjct: 176 GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEES 219

Query: 62  121
           
Sbjct: 236 219

Query: 122 134
           
Sbjct: 296 219

BLAST of CU169753 vs. NCBI nr
Match: gi|659068150|ref|XP_008443003.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-14
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 2

Query: 2   GRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEEA 61
           GR+ REIEHPSSQISTDFNNIW SPEE+EKMVNAKRVIPFLEE+
Sbjct: 173 GRYLREIEHPSSQISTDFNNIWTSPEEQEKMVNAKRVIPFLEES 216

Query: 62  121
           
Sbjct: 233 216

Query: 122 134
           
Sbjct: 293 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LSF6_CUCSA9.9e-1797.73Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077140 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778664946|ref|XP_011648446.1|2.4e-1697.73PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus][more]
gi|700209617|gb|KGN64713.1|2.4e-1697.73hypothetical protein Csa_1G077140 [Cucumis sativus][more]
gi|659068150|ref|XP_008443003.1|6.6e-1488.64PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G077140Csa1G077140gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0132317H0132317EST