Csa1G042670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G042670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionChaperone protein DnaJ; contains IPR001623 (DnaJ domain)
LocationChr1 : 4430048 .. 4431545 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAATGAAAGGCTAGAAAGATGTAGCTTTGAAGTGTGAGTATTCATTCTCATCCACACAAAGCAGTGGTAATGGTTTTGATTTAACTCTCTTCTTCCCCTTCCATTCCATTCCTTTCCATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTAAGTGAGTAAAGGTTTTTTCCTTGCTTAATTAGGTTAGTCTTATTGTATATTCTTCAATCTCATGTAGGAGTGTCCAAAAAATACAAACAAATCCAGCTCACTCAATGCATATAGTTTCGGTAGGGTTACCGGCTCGAGCAGGATTCAAATAAATGAAGATTTTATAGATTAAGTTGGTATATATGCATCATCTAAACTAATCCAAACCAACCCAAACTTAGTATTAAGCTTATAAGTACGTTTTTCCTCCTATGATAGAATTATATTTAAACCTTTTTTTTGACAAATTATTCTCCAAATACATCTAAAAATCATCTTGCAACCGTTTAAAAAGAAAATTGTTTGTAATATAAATTGAAATAGAGTTGTTAATCTTAATTCAATATATGAAAATAATTAAATAAAAATTAATAAGTGAAAAGAGTATCTCAATCCAGTCCAAACCAAACTTTCACGGTTGGATTGGGTTCTATTCATAATTTAATAAGAGTTATTCGGTGCGAAGAAATTTACATCCAACAATTGAATTAGGTCTAAAAAATGTTTCAATCCACGAATACTATCGATTTTCATAAATTATACAAAGATATAATAGTGTGTTCTTATGTGTAATATACGTGAAGGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGTCGAAAGTTCTACGACTGGACGCTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGATATATTACATACATACAAATTCCTAAAAATATAACAAAATTTTATATT

mRNA sequence

ATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGTCGAAAGTTCTACGACTGGACGCTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGA

Coding sequence (CDS)

ATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGTCGAAAGTTCTACGACTGGACGCTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGA

Protein sequence

MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY*
Homology
[Close]
BLAST of Csa1G042670 vs. Swiss-Prot
Match: NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana GN=ndhT PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.0e-75
Identity = 135/212 (63.68%), Postives = 167/212 (78.77%), Query Frame = 1 

Query: 24  RTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVSNNMLGPS-LA 83
           R  R+YA+Q P    + P PGVDTRIHW++ +EGWIG +   +   +    N+L     A
Sbjct: 39  RVTRIYASQGPTKPSK-PSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFA 98

Query: 84  DLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYE 143
           +L+ +S DSHYQFLGV  +A++EEIKSAYRRLSKEYHPDTTSLPLK ASEKFMKL++VY 
Sbjct: 99  ELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYN 158

Query: 144 VLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELS 203
           VLS+EE+R+FYDWTLAQE ASRQA+K+RMKLEDP EQ+ + + S PDMVDRLGGRN+ELS
Sbjct: 159 VLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELS 218

Query: 204 DQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           DQA TALT DI I+LFA+ CI +V++FK+P Y
Sbjct: 219 DQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]
BLAST of Csa1G042670 vs. Swiss-Prot
Match: DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 1 

Query: 92  HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRK 151
           +YQ LGV  +A  EEIK AYRRL+KEYHPD ++   + ASEKF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 152 FYDWTLAQEEASRQAD 168
            YD  L   +     D
Sbjct: 66  EYDRILKSGDEKSYRD 79

[Close]
BLAST of Csa1G042670 vs. Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-11
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 92  HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRK 151
           +Y+ LGV   A  +EIK AYR+LSK+YHPD    P   A+EKF ++K+ YEVLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 152 FYD 155
            YD
Sbjct: 66  RYD 66

[Close]
BLAST of Csa1G042670 vs. Swiss-Prot
Match: DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.2e-11
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 92  HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRK 151
           +Y+ LGV   A  EEIK AYR+LSK+YHPD    P   A+EKF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 152 FYD 155
            YD
Sbjct: 66  HYD 66

[Close]
BLAST of Csa1G042670 vs. Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein DnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 92  HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRK 151
           +Y+ LGV   A  +EIK AYR+LSK+YHPD    P   A+EKF ++K+ YEVLS++E R 
Sbjct: 6   YYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 152 FYD 155
            YD
Sbjct: 66  RYD 66

[Close]
BLAST of Csa1G042670 vs. TrEMBL
Match: A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 3.8e-132
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

Query: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60
           MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120
           RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180
           DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]
BLAST of Csa1G042670 vs. TrEMBL
Match: A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.8e-81
Identity = 147/212 (69.34%), Postives = 177/212 (83.49%), Query Frame = 1 

Query: 28  VYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVS-----NNMLGPSLA 87
           V A+Q P+  R+R PPGVDTRIHW NE+EGWIG   K    +  +       N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA++EE+K+AYRRLSKEYHPDTTSLPLK ASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLR++LEDPY+Q+L+N+   PDMVDRLGGRN+ELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           DQA TALT D+F+I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Csa1G042670 vs. TrEMBL
Match: A0A103XGU1_CYNCS (DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007539 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-80
Identity = 145/216 (67.13%), Postives = 182/216 (84.26%), Query Frame = 1 

Query: 27  RVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG--------RKKKESNDQNNVSNNMLG 86
           R+YAA+    +R+R PPGVDTRIHW+NE+EGW+G        RK +E  +Q   +NN+LG
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQ---TNNLLG 102

Query: 87  PSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLK 146
              ++LLNNS+DSHYQFLGV AEA++EEIK+AYRRLSKEYHPDTTSLPLK ASE FMKL+
Sbjct: 103 EKFSELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLR 162

Query: 147 QVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRN 206
           +VY+VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW S PDMVDRLGGRN
Sbjct: 163 EVYDVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRN 222

Query: 207 LELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           +ELSDQA +ALT DIFII+F+I CI+YV++FKEPYY
Sbjct: 223 MELSDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]
BLAST of Csa1G042670 vs. TrEMBL
Match: A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=NDHT PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 144/212 (67.92%), Postives = 179/212 (84.43%), Query Frame = 1 

Query: 27  RVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQN----NVSNNMLGPSLA 86
           R++A+      R+R PPGVDTRIHW+NE+EGWIG    +++           N+LG   A
Sbjct: 20  RIFASSEQPYKRQRAPPGVDTRIHWENEDEGWIGGNSSQTSQSKLNAEEEEKNLLGEKFA 79

Query: 87  DLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYE 146
           +LLN+SSDSHYQFLGV+A+A++EEIK+AYR+LSKEYHPDTTSLPLK AS+KFMKL+++Y+
Sbjct: 80  ELLNDSSDSHYQFLGVEAQADLEEIKTAYRKLSKEYHPDTTSLPLKAASDKFMKLREIYD 139

Query: 147 VLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELS 206
           VLSN+ESR+FYDWTLAQE ASRQA+K+RMKLEDPY+QEL  + S PD+VDRLGG+NL+LS
Sbjct: 140 VLSNDESRRFYDWTLAQEAASRQAEKMRMKLEDPYQQELDKYESVPDLVDRLGGKNLKLS 199

Query: 207 DQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           DQASTALT+DI II+FAI CIVYVL+FKEPYY
Sbjct: 200 DQASTALTIDIAIIIFAICCIVYVLIFKEPYY 231

[Close]
BLAST of Csa1G042670 vs. TrEMBL
Match: A0A067GW77_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024973mg PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.4e-80
Identity = 160/253 (63.24%), Postives = 186/253 (73.52%), Query Frame = 1 

Query: 3   SPPFPNSLLFHKTFHSS---------APTFRT----WRVYAAQ--APNNDRRRPPPGVDT 62
           SP  P SL F KT H S         A T RT     RV+A+Q    N  +RR  PGVDT
Sbjct: 8   SPQSPYSL-FLKTQHGSLQQLTKEPRAATARTRSKILRVFASQKAGSNKSQRRAQPGVDT 67

Query: 63  RIHWQNEEEGWIGRKKKESNDQNNVSN------NMLGPSLADLLNNSSDSHYQFLGVDAE 122
           RIHW+NE+EGWIG     S+  N   N      N+LG   ADLLNNSSDSHYQFLG+   
Sbjct: 68  RIHWENEDEGWIGGSSSSSHQTNQNFNAEEEQKNLLGEKFADLLNNSSDSHYQFLGISPS 127

Query: 123 AEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEE 182
           A++EEIKSAYRRLSKEYHPDTTSLPLK ASEKF+KL++VY+VLSNEESR+FYDWTLAQE 
Sbjct: 128 ADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 187

Query: 183 ASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIA 235
           ASR+A+KL+MK EDPY+Q L+N+ S PDMVDRLGGRN+ELSDQA TALT D+ +I+F   
Sbjct: 188 ASRKAEKLKMKFEDPYDQALKNYGSIPDMVDRLGGRNMELSDQAMTALTFDVVVIIFTFC 247

[Close]
BLAST of Csa1G042670 vs. TAIR10
Match: AT4G09350.1 (AT4G09350.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 281.6 bits (719), Expect = 4.5e-76
Identity = 135/212 (63.68%), Postives = 167/212 (78.77%), Query Frame = 1 

Query: 24  RTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVSNNMLGPS-LA 83
           R  R+YA+Q P    + P PGVDTRIHW++ +EGWIG +   +   +    N+L     A
Sbjct: 39  RVTRIYASQGPTKPSK-PSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFA 98

Query: 84  DLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYE 143
           +L+ +S DSHYQFLGV  +A++EEIKSAYRRLSKEYHPDTTSLPLK ASEKFMKL++VY 
Sbjct: 99  ELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYN 158

Query: 144 VLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELS 203
           VLS+EE+R+FYDWTLAQE ASRQA+K+RMKLEDP EQ+ + + S PDMVDRLGGRN+ELS
Sbjct: 159 VLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELS 218

Query: 204 DQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           DQA TALT DI I+LFA+ CI +V++FK+P Y
Sbjct: 219 DQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]
BLAST of Csa1G042670 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-11
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 1 

Query: 66  SNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSL 125
           S+  +    N  G SL  ++  +S  +Y  LGV   A  +EIK+AYRRL+++YHPD    
Sbjct: 52  SSSSSTPYRNRRGRSL--VVFATSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKE 111

Query: 126 PLKVASEKFMKLKQVYEVLSNEESRKFYD 155
           P   A+EKF ++   YEVLS+E+ R  YD
Sbjct: 112 P--GATEKFKEISAAYEVLSDEQKRALYD 136

[Close]
BLAST of Csa1G042670 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10
Identity = 35/84 (41.67%), Postives = 45/84 (53.57%), Query Frame = 1 

Query: 72  VSNNMLGPSLADLLNNSSDS-HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVA 131
           +S NM  P         +D+ +Y  LGV   A   EIKSAYR+L++ YHPD    P   A
Sbjct: 66  MSRNMHPPRRGSRFTVRADADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDP--GA 125

Query: 132 SEKFMKLKQVYEVLSNEESRKFYD 155
            EKF ++   YEVLS++E +  YD
Sbjct: 126 EEKFKEISNAYEVLSDDEKKSLYD 147

[Close]
BLAST of Csa1G042670 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1 

Query: 92  HYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRK 151
           HY  L V+  A ++EIKS+YR+L+++YHPD    P   A +KF ++   YEVLS+EE R 
Sbjct: 64  HYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNP--GAEDKFKQISAAYEVLSDEEKRS 123

Query: 152 FYD 155
            YD
Sbjct: 124 AYD 124

[Close]
BLAST of Csa1G042670 vs. TAIR10
Match: AT5G06910.1 (AT5G06910.1 J-domain protein 6)

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 1 

Query: 59  IGRKKKE---SNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLS 118
           +GRKKK    + +++ +  +  GPS       S  S Y+ LGV+  A  +EI+ AY +L+
Sbjct: 1   MGRKKKSRASTTEEDEIEMDNAGPS-------SETSLYEVLGVERRATSQEIRKAYHKLA 60

Query: 119 KEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQAD---KLRMK 178
            + HPD      K A +KF +L++V  +L +EE R  YD T + ++A    D    LR  
Sbjct: 61  LKLHPDKNQ-DDKEAKDKFQQLQKVISILGDEEKRAVYDQTGSIDDADIPGDAFENLRDF 119

Query: 179 LEDPYEQ 180
             D Y++
Sbjct: 121 FRDMYKK 119

[Close]
BLAST of Csa1G042670 vs. NCBI nr
Match: gi|449439697|ref|XP_004137622.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 5.5e-132
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

Query: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60
           MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120
           RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180
           DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]
BLAST of Csa1G042670 vs. NCBI nr
Match: gi|659066817|ref|XP_008462782.1| (PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo])

HSP 1 Score: 457.6 bits (1176), Expect = 1.3e-125
Identity = 223/234 (95.30%), Postives = 227/234 (97.01%), Query Frame = 1 

Query: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60
           MAS PFPNSLLFHKTFHS AP FRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120
            KKKESNDQNN SNNMLGPSLADLLNNSSDSHYQFLGV AEAEVEEIKSAYRRLSKEYHP
Sbjct: 61  GKKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180
           DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+KLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180

Query: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           LQNW STPDMVDRLGGRN+ELSDQA+TALTLDIFIILFAIACIVYVL+FKEPYY
Sbjct: 181 LQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]
BLAST of Csa1G042670 vs. NCBI nr
Match: gi|590699286|ref|XP_007045885.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao])

HSP 1 Score: 308.5 bits (789), Expect = 9.8e-81
Identity = 147/212 (69.34%), Postives = 177/212 (83.49%), Query Frame = 1 

Query: 28  VYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVS-----NNMLGPSLA 87
           V A+Q P+  R+R PPGVDTRIHW NE+EGWIG   K    +  +       N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA++EE+K+AYRRLSKEYHPDTTSLPLK ASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLR++LEDPY+Q+L+N+   PDMVDRLGGRN+ELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           DQA TALT D+F+I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Csa1G042670 vs. NCBI nr
Match: gi|976902566|gb|KVH90508.1| (DnaJ domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-80
Identity = 145/216 (67.13%), Postives = 182/216 (84.26%), Query Frame = 1 

Query: 27  RVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG--------RKKKESNDQNNVSNNMLG 86
           R+YAA+    +R+R PPGVDTRIHW+NE+EGW+G        RK +E  +Q   +NN+LG
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQ---TNNLLG 102

Query: 87  PSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLK 146
              ++LLNNS+DSHYQFLGV AEA++EEIK+AYRRLSKEYHPDTTSLPLK ASE FMKL+
Sbjct: 103 EKFSELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLR 162

Query: 147 QVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRN 206
           +VY+VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW S PDMVDRLGGRN
Sbjct: 163 EVYDVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRN 222

Query: 207 LELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 235
           +ELSDQA +ALT DIFII+F+I CI+YV++FKEPYY
Sbjct: 223 MELSDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]
BLAST of Csa1G042670 vs. NCBI nr
Match: gi|568838327|ref|XP_006473166.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Citrus sinensis])

HSP 1 Score: 306.2 bits (783), Expect = 4.9e-80
Identity = 160/253 (63.24%), Postives = 186/253 (73.52%), Query Frame = 1 

Query: 3   SPPFPNSLLFHKTFHSS---------APTFRT----WRVYAAQ--APNNDRRRPPPGVDT 62
           SP  P SL F KT H S         A T RT     RV+A+Q    N  +RR  PGVDT
Sbjct: 8   SPQSPYSL-FLKTQHGSLQQLTKEPRAATARTRSKILRVFASQKAGSNKSQRRAQPGVDT 67

Query: 63  RIHWQNEEEGWIGRKKKESNDQNNVSN------NMLGPSLADLLNNSSDSHYQFLGVDAE 122
           RIHW+NE+EGWIG     S+  N   N      N+LG   ADLLNNSSDSHYQFLG+   
Sbjct: 68  RIHWENEDEGWIGGSSSSSHQTNQNFNAEEEQKNLLGEKFADLLNNSSDSHYQFLGISPS 127

Query: 123 AEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEE 182
           A++EEIKSAYRRLSKEYHPDTTSLPLK ASEKF+KL++VY+VLSNEESR+FYDWTLAQE 
Sbjct: 128 ADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 187

Query: 183 ASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIA 235
           ASR+A+KL+MK EDPY+Q L+N+ S PDMVDRLGGRN+ELSDQA TALT D+ +I+F   
Sbjct: 188 ASRKAEKLKMKFEDPYDQALKNYGSIPDMVDRLGGRNMELSDQAMTALTFDVVVIIFTFC 247

The following BLAST results are available for this feature:
BLAST of Csa1G042670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDHT_ARATH8.0e-7563.68NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ... [more]
DNAJ_HYDTT1.3e-1148.68Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12... [more]
DNAJ_GEOKA6.3e-1152.38Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 ... [more]
DNAJ_GEOSE8.2e-1152.38Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1[more]
DNAJ_GEOTN1.1e-1052.38Chaperone protein DnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dna... [more]
BLAST of Csa1G042670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT25_CUCSA3.8e-132100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1[more]
A0A061EBG7_THECC6.8e-8169.34Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 ... [more]
A0A103XGU1_CYNCS1.2e-8067.13DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00753... [more]
A0A0F7H024_9ROSI1.5e-8067.92Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=N... [more]
A0A067GW77_CITSI3.4e-8063.24Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024973mg PE=4 SV=1[more]
BLAST of Csa1G042670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G09350.14.5e-7663.68 Chaperone DnaJ-domain superfamily protein[more]
AT1G80030.15.1e-1141.57 Molecular chaperone Hsp40/DnaJ family protein[more]
AT2G22360.11.9e-1041.67 DNAJ heat shock family protein[more]
AT3G17830.12.5e-1047.62 Molecular chaperone Hsp40/DnaJ family protein[more]
AT5G06910.14.3e-1033.07 J-domain protein 6[more]
BLAST of Csa1G042670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439697|ref|XP_004137622.1|5.5e-132100.00PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [C... [more]
gi|659066817|ref|XP_008462782.1|1.3e-12595.30PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo][more]
gi|590699286|ref|XP_007045885.1|9.8e-8169.34Chaperone DnaJ-domain superfamily protein [Theobroma cacao][more]
gi|976902566|gb|KVH90508.1|1.7e-8067.13DnaJ domain-containing protein [Cynara cardunculus var. scolymus][more]
gi|568838327|ref|XP_006473166.1|4.9e-8063.24PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Citrus sinen... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR018253DnaJ_domain_CS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU091273cucumber EST collection version 3.0transcribed_cluster
CU121498cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G042670.1Csa1G042670.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU121498CU121498transcribed_cluster
CU091273CU091273transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 93..111
score: 7.0E-14coord: 129..149
score: 7.0E-14coord: 111..126
score: 7.0
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 87..162
score: 5.9
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 92..154
score: 7.8
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 90..149
score: 7.6
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 91..157
score: 18
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 89..159
score: 1.57
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 134..153
scor
NoneNo IPR availableunknownCoilCoilcoord: 97..117
score: -coord: 127..147
scor
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 35..154
score: 4.4
NoneNo IPR availablePANTHERPTHR24078:SF177PROTEIN DNJ-23-RELATEDcoord: 35..154
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G042670MELO3C002119Melon (DHL92) v3.5.1cumeB027
Csa1G042670MELO3C002119.2Melon (DHL92) v3.6.1cumedB022
Csa1G042670Bhi08G001061Wax gourdcuwgoB028
Csa1G042670CSPI01G07070Wild cucumber (PI 183967)cpicuB000
Csa1G042670Cucsa.121800Cucumber (Gy14) v1cgycuB159
Csa1G042670CsGy1G006880Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G042670Wax gourdcuwgoB093
Csa1G042670Cucumber (Chinese Long) v2cucuB000
Csa1G042670Cucumber (Gy14) v1cgycuB139
Csa1G042670Cucurbita maxima (Rimu)cmacuB056
Csa1G042670Cucurbita maxima (Rimu)cmacuB088
Csa1G042670Cucurbita maxima (Rimu)cmacuB217
Csa1G042670Cucurbita maxima (Rimu)cmacuB390
Csa1G042670Cucurbita moschata (Rifu)cmocuB046
Csa1G042670Cucurbita moschata (Rifu)cmocuB077
Csa1G042670Cucurbita moschata (Rifu)cmocuB202
Csa1G042670Cucurbita moschata (Rifu)cmocuB380
Csa1G042670Melon (DHL92) v3.5.1cumeB056
Csa1G042670Watermelon (Charleston Gray)cuwcgB057
Csa1G042670Watermelon (Charleston Gray)cuwcgB083
Csa1G042670Watermelon (97103) v1cuwmB062
Csa1G042670Watermelon (97103) v1cuwmB096
Csa1G042670Cucurbita pepo (Zucchini)cpecuB029
Csa1G042670Cucurbita pepo (Zucchini)cpecuB369
Csa1G042670Cucurbita pepo (Zucchini)cpecuB505
Csa1G042670Cucurbita pepo (Zucchini)cpecuB655
Csa1G042670Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G042670Bottle gourd (USVL1VR-Ls)culsiB072
Csa1G042670Cucumber (Gy14) v2cgybcuB004
Csa1G042670Melon (DHL92) v3.6.1cumedB048
Csa1G042670Silver-seed gourdcarcuB0415
Csa1G042670Silver-seed gourdcarcuB0542
Csa1G042670Silver-seed gourdcarcuB0623
Csa1G042670Silver-seed gourdcarcuB0802
Csa1G042670Watermelon (97103) v2cuwmbB054
Csa1G042670Watermelon (97103) v2cuwmbB080