CsGy1G006880 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTACAATAAATTTTTGGAAAAACTGTCCACTTTACTCTTTATTGTAAAAGTAGTAAAATTGGACGACAAATTTAGATAATTGTGCCTTTTAACCATCTTAATTTCTAATAAGTAGTCGTCCAAATACCACAATACAGTAGCTAAACATTTTATTATTTTTTTTAACTATGTTAGAATCATTCTATGATGTAATTCAGTTTGCCTGAGATTTAATATCTCAGGAGTTTTTTTAAATAATGTATAAGTTGCCTTTATAAATATTAAAAGAATGAAGAAGCACAAGAAAACAATTTACTAATAGGTCAAGGGGGAATGTAAGGCTAGAAAGATGTAGCTTTGAAGTGTGAGTATTCATTCTCATCCACACAAAGCAGTGGTAATGGTTTTGATTTAACTCTCTTCTTCCCCTTCCATTCCATTCCTTTCCATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTAAGTGAGTAAAGGTTTTTTCCTTGCTTAATTAGGTTAGTCTTATTGTATATTCTTCAATCTCATGTAGGAGTGTCCAAAAAATACAAACAAATCCAACTCACTCAATGCATATAGTTTCGGTTACCGGCTCGAGCAGGATTCAAATAAATGAAGATTTTATAGATTAAGTTGGTATATATGCATCATCTAAACTAATCCAAACCAACCCAAACTTAGTATTAAGCTTATAAGTACGTTTTTCCTCCTATGATAGAATTATATTTAAACCTTTTTTTTGACAAATTATTCTCCAAATACATCTAAAAATCATCTTGCAACCGTTTAAAAAGAAAATTGTTTGTAATATAAATTGAAATAGAGTTGTTAATCTTAATTCAATATATGAAAATAATTAAATAAAAATTAATAAGCGAAAAGAGTATCTCAATCCAGTCCAAACCAAACTTTCACGGTTGGATTAGGTTTTATTCATAATTTAATAAGAGTTATTTGGTGCGAAGAAATTTACATCCAACAATTGAATTAGATCTAAAAAATGTTTCAACCCACGAATACTATCGATTTTCATAAATTATACAAAGATACAATTGTGTGTTCTTATGTGTAATATACATGAAGGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGCCGAAAGTTCTACGACTGGACACTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGATATATTACATACATACAAATTCCTAAAAATATAACAAAATTTTATATTCTACATCCGTCGTATAAGATTTTGCTTTCATTTTATAAATGTTTTCGTTTATTTTACTATATTTGAAAATATTTATATACCATTCAATTCCTTTCCGTTCGAAATCAAAATCAAT CCTTTACAATAAATTTTTGGAAAAACTGTCCACTTTACTCTTTATTGTAAAAGTAGTAAAATTGGACGACAAATTTAGATAATTGTGCCTTTTAACCATCTTAATTTCTAATAAGTAGTCGTCCAAATACCACAATACAGTAGCTAAACATTTTATTATTTTTTTTAACTATGTTAGAATCATTCTATGATGTAATTCAGTTTGCCTGAGATTTAATATCTCAGGAGTTTTTTTAAATAATGTATAAGTTGCCTTTATAAATATTAAAAGAATGAAGAAGCACAAGAAAACAATTTACTAATAGGTCAAGGGGGAATGTAAGGCTAGAAAGATGTAGCTTTGAAGTGTGAGTATTCATTCTCATCCACACAAAGCAGTGGTAATGGTTTTGATTTAACTCTCTTCTTCCCCTTCCATTCCATTCCTTTCCATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGCCGAAAGTTCTACGACTGGACACTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGATATATTACATACATACAAATTCCTAAAAATATAACAAAATTTTATATTCTACATCCGTCGTATAAGATTTTGCTTTCATTTTATAAATGTTTTCGTTTATTTTACTATATTTGAAAATATTTATATACCATTCAATTCCTTTCCGTTCGAAATCAAAATCAAT ATGGCTTCTCCTCCATTTCCCAATTCTCTCCTCTTTCACAAAACCTTCCATTCCTCTGCTCCCACATTTCGTACATGGCGCGTCTATGCAGCTCAAGCTCCCAACAACGACCGCCGACGACCTCCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAGGAAGAAGGATGGATTGGACGCAAGAAAAAGGAGAGTAATGATCAAAACAATGTCAGTAATAACATGTTGGGTCCAAGTTTGGCAGACTTGCTCAACAACTCTTCTGATTCTCACTACCAGTTCTTAGGAGTAGATGCAGAGGCAGAGGTAGAAGAGATAAAAAGTGCGTATAGAAGATTATCGAAAGAGTATCATCCGGACACGACCTCTCTCCCTCTAAAAGTTGCGTCGGAGAAATTCATGAAACTAAAACAAGTGTATGAGGTACTAAGCAACGAAGAAAGCCGAAAGTTCTACGACTGGACACTTGCACAAGAAGAGGCGAGTCGTCAAGCGGACAAATTGAGGATGAAGTTAGAAGATCCTTACGAACAAGAATTGCAAAATTGGGTATCAACTCCAGACATGGTGGATAGGCTTGGAGGAAGAAACTTGGAGTTGAGTGATCAAGCCTCCACTGCTCTTACTTTAGATATCTTTATCATTCTCTTTGCTATAGCTTGCATTGTTTATGTCTTGCTTTTCAAAGAACCATATTATTGA MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIGRKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY
BLAST of CsGy1G006880 vs. NCBI nr
Match: XP_004137622.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus] >KGN64159.1 hypothetical protein Csa_1G042670 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 1.6e-127 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of CsGy1G006880 vs. NCBI nr
Match: XP_008462782.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 1.8e-110 Identity = 208/234 (88.89%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CsGy1G006880 vs. NCBI nr
Match: XP_022990181.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita maxima]) HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100 Identity = 194/236 (82.20%), Postives = 208/236 (88.14%), Query Frame = 0
BLAST of CsGy1G006880 vs. NCBI nr
Match: XP_023521950.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023553300.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97 Identity = 190/240 (79.17%), Postives = 204/240 (85.00%), Query Frame = 0
BLAST of CsGy1G006880 vs. NCBI nr
Match: XP_022963850.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata]) HSP 1 Score: 364.0 bits (933), Expect = 3.8e-97 Identity = 190/240 (79.17%), Postives = 202/240 (84.17%), Query Frame = 0
BLAST of CsGy1G006880 vs. TAIR10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 268.5 bits (685), Expect = 4.0e-72 Identity = 135/212 (63.68%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of CsGy1G006880 vs. TAIR10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of CsGy1G006880 vs. TAIR10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 61.2 bits (147), Expect = 9.6e-10 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of CsGy1G006880 vs. TAIR10
Match: AT2G22360.1 (DNAJ heat shock family protein) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09 Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of CsGy1G006880 vs. TAIR10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 55.1 bits (131), Expect = 6.9e-08 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of CsGy1G006880 vs. Swiss-Prot
Match: sp|Q9SMS0|NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 7.1e-71 Identity = 135/212 (63.68%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of CsGy1G006880 vs. Swiss-Prot
Match: sp|Q75VW3|DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of CsGy1G006880 vs. Swiss-Prot
Match: sp|Q5KWZ8|DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of CsGy1G006880 vs. Swiss-Prot
Match: sp|Q45552|DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of CsGy1G006880 vs. Swiss-Prot
Match: sp|C5D4U0|DNAJ_GEOSW (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.1e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of CsGy1G006880 vs. TrEMBL
Match: tr|A0A0A0LT25|A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042670 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-127 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of CsGy1G006880 vs. TrEMBL
Match: tr|A0A1S3CHS6|A0A1S3CHS6_CUCME (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501040 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110 Identity = 208/234 (88.89%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CsGy1G006880 vs. TrEMBL
Match: tr|A0A1R3HNL6|A0A1R3HNL6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_27894 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 7.6e-78 Identity = 150/212 (70.75%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of CsGy1G006880 vs. TrEMBL
Match: tr|A0A061EBG7|A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_011554 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.1e-76 Identity = 147/212 (69.34%), Postives = 177/212 (83.49%), Query Frame = 0
BLAST of CsGy1G006880 vs. TrEMBL
Match: tr|A0A0F7H024|A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus OX=377280 GN=NDHT PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76 Identity = 144/212 (67.92%), Postives = 180/212 (84.91%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |