Csa1G042410 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G042410
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 4293243 .. 4294312 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAAATCCTTTCCATGGAATTGCTTTCGCAGTAAACCCTTCTTCTTTGCATTTGGTTTTGCTTAAGCTTCTTCTTTCCATGGACGGCCATGTCTACGATCCCTTCGATTCACTCGCAAAACTTTGCCTCATTTCCCACTCCCAAGAGGATATATTACGTCACTGCTCTTTCGCCGGCGCCCCTAACTCCCTTGATGCCTCTCGTTTTCCGCCCTCCCAATTCCTTCACCCTTACCCCACTCCTGTTTCCACGGCTTCTCCTCCGGAAAGTTTGGAACAAAGAGAACAACTCATCTCTCCTGATGCCTGCCAGCCTCCACCGGAACAGTCTGGTGGACGCCGGCCCGTGGTTGTTGATGATCCTTCTGTTCAAGATGCCGCCGCGGCGGTTGGAGGTGGATGTGTGAGCAATGTTCCTACTGGAGTCGATTTGGGGAAAAATGATGAACTAGGGTTTCTCGAAGTTCAATCCACTCGACAGACTGATGGAATTGAGATTATCGGTGTTCGTAGAAGCAAGGTTTCGGAGTCTGGTACTGATGGAGAAGCTGAATCGGCATCAAAGAGGTTGAAGCTCTCGAATGAAGCTTTGGGCAAAGACTCTTCTGTACCTTTTGTCGGTCTACTGATCGAGAAATCGGTACCAGTCGGTGAAGAATCCGGCAAAATTGATGATGGAAAGGTCTCCAATGGGGAAGAAACTCACTGTAACAAGAACAAGCAAAACTTGACAGAGAAGAAAGTCGAAAATTCCCAGCCTGAAGTACCGGGCGAGTACGACGGAGTGATGAATCGCGATGCAGGGAGGGAGACTCTGATATCAATATTGAATGGATTGATTTCGAAGGAGAAAAATGATGATGCAACCTCATCTGGTGAATCTGGGAGTGGCAATTCCATCATTATGGAAATCTTGAAGATTTTGTCACAAGTAGAAAGAAGTGATGAAGACGAGAAATTAGCAGACATGAATCTTATTGAAGTGGCAATGAGCCGTGGAATGACATTTCCTCGGCCGTGTTGGTGGCCGGAGGAGTATGGTTCCAACGGCTTGGAGAAGAAAAAGTGA

mRNA sequence

ATGGACGGCCATGTCTACGATCCCTTCGATTCACTCGCAAAACTTTGCCTCATTTCCCACTCCCAAGAGGATATATTACGTCACTGCTCTTTCGCCGGCGCCCCTAACTCCCTTGATGCCTCTCGTTTTCCGCCCTCCCAATTCCTTCACCCTTACCCCACTCCTGTTTCCACGGCTTCTCCTCCGGAAAGTTTGGAACAAAGAGAACAACTCATCTCTCCTGATGCCTGCCAGCCTCCACCGGAACAGTCTGGTGGACGCCGGCCCGTGGTTGTTGATGATCCTTCTGTTCAAGATGCCGCCGCGGCGGTTGGAGGTGGATGTGTGAGCAATGTTCCTACTGGAGTCGATTTGGGGAAAAATGATGAACTAGGGTTTCTCGAAGTTCAATCCACTCGACAGACTGATGGAATTGAGATTATCGGTGTTCGTAGAAGCAAGGTTTCGGAGTCTGGTACTGATGGAGAAGCTGAATCGGCATCAAAGAGGTTGAAGCTCTCGAATGAAGCTTTGGGCAAAGACTCTTCTGTACCTTTTGTCGGTCTACTGATCGAGAAATCGGTACCAGTCGGTGAAGAATCCGGCAAAATTGATGATGGAAAGGTCTCCAATGGGGAAGAAACTCACTGTAACAAGAACAAGCAAAACTTGACAGAGAAGAAAGTCGAAAATTCCCAGCCTGAAGTACCGGGCGAGTACGACGGAGTGATGAATCGCGATGCAGGGAGGGAGACTCTGATATCAATATTGAATGGATTGATTTCGAAGGAGAAAAATGATGATGCAACCTCATCTGGTGAATCTGGGAGTGGCAATTCCATCATTATGGAAATCTTGAAGATTTTGTCACAAGTAGAAAGAAGTGATGAAGACGAGAAATTAGCAGACATGAATCTTATTGAAGTGGCAATGAGCCGTGGAATGACATTTCCTCGGCCGTGTTGGTGGCCGGAGGAGTATGGTTCCAACGGCTTGGAGAAGAAAAAGTGA

Coding sequence (CDS)

ATGGACGGCCATGTCTACGATCCCTTCGATTCACTCGCAAAACTTTGCCTCATTTCCCACTCCCAAGAGGATATATTACGTCACTGCTCTTTCGCCGGCGCCCCTAACTCCCTTGATGCCTCTCGTTTTCCGCCCTCCCAATTCCTTCACCCTTACCCCACTCCTGTTTCCACGGCTTCTCCTCCGGAAAGTTTGGAACAAAGAGAACAACTCATCTCTCCTGATGCCTGCCAGCCTCCACCGGAACAGTCTGGTGGACGCCGGCCCGTGGTTGTTGATGATCCTTCTGTTCAAGATGCCGCCGCGGCGGTTGGAGGTGGATGTGTGAGCAATGTTCCTACTGGAGTCGATTTGGGGAAAAATGATGAACTAGGGTTTCTCGAAGTTCAATCCACTCGACAGACTGATGGAATTGAGATTATCGGTGTTCGTAGAAGCAAGGTTTCGGAGTCTGGTACTGATGGAGAAGCTGAATCGGCATCAAAGAGGTTGAAGCTCTCGAATGAAGCTTTGGGCAAAGACTCTTCTGTACCTTTTGTCGGTCTACTGATCGAGAAATCGGTACCAGTCGGTGAAGAATCCGGCAAAATTGATGATGGAAAGGTCTCCAATGGGGAAGAAACTCACTGTAACAAGAACAAGCAAAACTTGACAGAGAAGAAAGTCGAAAATTCCCAGCCTGAAGTACCGGGCGAGTACGACGGAGTGATGAATCGCGATGCAGGGAGGGAGACTCTGATATCAATATTGAATGGATTGATTTCGAAGGAGAAAAATGATGATGCAACCTCATCTGGTGAATCTGGGAGTGGCAATTCCATCATTATGGAAATCTTGAAGATTTTGTCACAAGTAGAAAGAAGTGATGAAGACGAGAAATTAGCAGACATGAATCTTATTGAAGTGGCAATGAGCCGTGGAATGACATTTCCTCGGCCGTGTTGGTGGCCGGAGGAGTATGGTTCCAACGGCTTGGAGAAGAAAAAGTGA

Protein sequence

MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTASPPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFVGLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPEEYGSNGLEKKK*

Homology

[Close]

BLAST of Csa1G042410 vs. TrEMBL
Match: A0A0A0LT00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042410 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 4.5e-187
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1


Query: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 60
           MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS
Sbjct: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 60

Query: 61  PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK 120
           PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK
Sbjct: 61  PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK 120

Query: 121 NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV 180
           NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV
Sbjct: 121 NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV 180

Query: 181 GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD 240
           GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD
Sbjct: 181 GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD 240

Query: 241 AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI 300
           AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI
Sbjct: 241 AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI 300

Query: 301 EVAMSRGMTFPRPCWWPEEYGSNGLEKKK 330
           EVAMSRGMTFPRPCWWPEEYGSNGLEKKK
Sbjct: 301 EVAMSRGMTFPRPCWWPEEYGSNGLEKKK 329

[Close]

BLAST of Csa1G042410 vs. TrEMBL
Match: A0A0A0L1F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017190 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.3e-21
Identity = 101/338 (29.88%), Postives = 158/338 (46.75%), Query Frame = 1


Query: 17  LISHSQEDILRHCSFAGA----PNSLDASRFPPSQFLHPYPTPVSTASPPESLEQREQLI 76
           +++ S  ++LR C F G      +S D+  FP         T +   S P+S+E+++  +
Sbjct: 10  IVTGSPVNVLRRCPFTGNVYSDSDSSDSEAFPVES------TGIFMLSLPDSMEEKDDSL 69

Query: 77  SPDACQPPPEQ-----SGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELG-F 136
            P + Q  PE+     S  RR +  D   V+ +   V  G        VDLG++ ++G +
Sbjct: 70  -PHSFQTAPEELAPNGSDERRSLAADSTGVEVSFEYVDDG------KAVDLGRDTDVGLY 129

Query: 137 LEVQSTRQT----DGIEIIGVRRSKVSESGTDGE---------AESASKRLKLSNEALGK 196
            EVQST +T      I +IGV  S  SE    G           ES+SK+L+LS EALG 
Sbjct: 130 SEVQSTTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALGL 189

Query: 197 DSSVPFVGLLIEKSVPVGEESGKIDDGKVSNGE--ETHCN---KNKQNLTEKKVENSQPE 256
            S     G   +       +    DDGK+SN E  E  CN   K+ +N  ++ V+N +  
Sbjct: 190 SSG----GSHNDDDCSGKYKLKGTDDGKISNDENDENQCNYKEKSAENEVKESVKNIESH 249

Query: 257 VPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERS 316
              ++   +      ++   +L   IS  KN+ A     +     I + +LKIL  ++  
Sbjct: 250 QQNKFQEEIAN--AHQSCCRVLPPSISGVKNNAAEERSNTSEDQPIEVTLLKILMILKGG 309

Query: 317 DE------DEKLADMNLIEVAMSRGMTFPRPCWWPEEY 321
            +      DE L+ ++++E+A  RGMTFPRP WWP EY
Sbjct: 310 QDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 328

[Close]

BLAST of Csa1G042410 vs. TrEMBL
Match: W9RXT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.8e-09
Identity = 84/297 (28.28%), Postives = 122/297 (41.08%), Query Frame = 1


Query: 7   DPFDSLAKLCLISHSQEDILRHCSFAGA---PNSLDASRFPPSQFLHPYPTPVSTASPPE 66
           DPF SL  LC IS SQE+ LR C FA     P + D S    +  +    T +   SPPE
Sbjct: 11  DPFGSLLPLCQISSSQEERLRRCPFAPERYNPEN-DGSSSESTGEIPLASTGIVMVSPPE 70

Query: 67  SLEQREQLISPDACQPPPEQSGGR-----RPVV-VD---------DPSVQDAAAAVGGGC 126
           S E      S D    PPE+S  +     RP V VD         D   +  A  +G   
Sbjct: 71  SEEDENNSNSRDVFHTPPEESAAQSSNEVRPTVDVDGCDLGRRSPDGGGETVAIGIGSSD 130

Query: 127 VSNVPTGVDLGKNDELGFLEVQSTRQTDG--------IEIIGVRRSKV-----SESGTDG 186
            +     VDL ++ +LGF EVQ T++ +         ++++    ++        S  DG
Sbjct: 131 ANCAGGTVDLSRDSDLGFSEVQLTQRENAYLDLNRSLVQVLETESTRARVLTRELSLVDG 190

Query: 187 EAESASKRLKLSNEALGKDSSVPFVGLLIEKSVPVGEESGKID----DGKVSNGEETHCN 246
             ES  K+LK+S + L +        L  E++      S   +    DG+ +   E    
Sbjct: 191 LGESPLKKLKVSVQNLEESDE----ELEPERATSANHSSDSNENLENDGEDAKSGEQSSA 250

Query: 247 KNKQNLTEKKVENSQPEVPGEYD-GVMNRDAGRETLISILNGLISKEKNDDATSSGE 268
           K K   T+        E+  E + GV+N   G+    +  NG  S  K  + TSS E
Sbjct: 251 KRKLEFTDNDDSTEVVELGTEPNYGVLNPRNGKSNGTNAANGEQSNGK--EKTSSQE 300

[Close]

BLAST of Csa1G042410 vs. TrEMBL
Match: W9RXT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.8e-06
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 1


Query: 150 ESGTDGEAESASKRLKLSNEALGKDSSVPFVGLLIEKSVPV-GEESGKIDDGKVSNGEET 209
           E    GE  SA ++L+ ++     D S   V L  E +  V    +GK +    +NGE++
Sbjct: 235 EDAKSGEQSSAKRKLEFTDN----DDSTEVVELGTEPNYGVLNPRNGKSNGTNAANGEQS 294

Query: 210 HCNKNKQNLTE--KKVENSQPEVPGEYDGVMNRDA--GRETLISILNGLISKEKNDDATS 269
           +  K K +  E    V N++     E   V +     GR  L + L G            
Sbjct: 295 N-GKEKTSSQEFVDTVRNNRTGATQETAAVEHEQLPPGRRMLPNSLLG-----------R 354

Query: 270 SGESGSGNSIIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPEE 320
           SG    G+S +  +L +L ++ + D D+ ++  +++EV   RGMTFPRP WWPEE
Sbjct: 355 SGNVAGGDSEVT-LLDVL-RLSKEDCDDGISSFSILEVCKGRGMTFPRPVWWPEE 391

HSP 2 Score: 67.8 bits (164), Expect = 2.9e-08
Identity = 85/335 (25.37%), Postives = 136/335 (40.60%), Query Frame = 1


Query: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAG-APNSLDASRFPPSQFLHPYPTPVSTA 60
           M   + DP++ L     IS SQE +LR  S    +P+S   S         P+   + T 
Sbjct: 1   MANQMTDPYNFLFDHAHISSSQESLLRDLSLGEHSPHSSSDSA--------PHSNAIVTV 60

Query: 61  SPPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLG 120
           SPP S       +S    +  P  +   +P V  +  V    +     C  +   G+ +G
Sbjct: 61  SPPASQNPAPVTVSHTPPRNTPIPAFCDQPGVATEGDVSARTSRFVDFCKRSKAVGLGMG 120

Query: 121 KNDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAE-SASKRLKLSNEALGKDSSVP 180
               LG   VQ TR+ D  +     R  VS     G  + +    LK  N  +G      
Sbjct: 121 SG--LGHSGVQLTREMDVDKPSRGARKDVSGGIRVGRFDLTVESPLKRPNLGIGSSRG-- 180

Query: 181 FVGLLIEKSVPVGEESGKIDDGKVSNGEETHCNKN---KQNLT-----EKKVENSQPEVP 240
                   SV V  + GK   G + +  E   N+N     NL+         E+      
Sbjct: 181 --------SVRVQSQKGKERVGNLVSETEKVSNENICSAGNLSTLVGNSGLCESQNVACS 240

Query: 241 GEYDGVMNRDAGRETLI---SILNGLISKEKNDDATSSGESGSGNSII--MEILKILSQV 300
           GE       D+G++      S+L   +    +  + ++ ESG     I   ++LK L++ 
Sbjct: 241 GERSKSSLEDSGKKKQSDKESVLPAGLPPSTSGPSKNAEESGKCKVKINVFDVLKFLAEC 300

Query: 301 ERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPEEY 321
             +++D+ L +M+L+EVA + G+ FPRP WWPE +
Sbjct: 301 S-NEKDDVLDEMSLLEVAQACGIEFPRPRWWPEGF 314

[Close]

BLAST of Csa1G042410 vs. TrEMBL
Match: V4TJ52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020707mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 1


Query: 7   DPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTASPPESLE 66
           DPF S+ KLC +S SQE+ LRHC F G P     +    S  +    T +   +PP+S+ 
Sbjct: 5   DPFASITKLCQVSSSQEEHLRHCRFVGEPEEDPQA----SGEIDEQLTGIMMITPPDSMS 64

Query: 67  QREQ-----LISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAV-----GGGCVSNVPTGV 126
             ++     L   +    PPE +     ++      +D    V      GGC     T V
Sbjct: 65  DNDENDNNALKDNEIFHTPPEDT-----LISSSDDHRDNQRVVIEEEAEGGCTEGEKT-V 124

Query: 127 DLGKNDELGFLEVQSTRQTDGI------EIIGVRRSKVSESGTDGEAESASKRLKLSNEA 186
           DLG + +LGF EV+ T+++         E+  +R  K   + ++   ES  K+ K+S+ +
Sbjct: 125 DLGTDTDLGFTEVELTQRSGSANEVIQSELNKIRVLKRELAASERLIESLKKKSKISDNS 184

[Close]

BLAST of Csa1G042410 vs. NCBI nr
Match: gi|700209033|gb|KGN64129.1| (hypothetical protein Csa_1G042410 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 6.4e-187
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1


Query: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 60
           MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS
Sbjct: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 60

Query: 61  PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK 120
           PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK
Sbjct: 61  PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGK 120

Query: 121 NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV 180
           NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV
Sbjct: 121 NDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALGKDSSVPFV 180

Query: 181 GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD 240
           GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD
Sbjct: 181 GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRD 240

Query: 241 AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI 300
           AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI
Sbjct: 241 AGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSDEDEKLADMNLI 300

Query: 301 EVAMSRGMTFPRPCWWPEEYGSNGLEKKK 330
           EVAMSRGMTFPRPCWWPEEYGSNGLEKKK
Sbjct: 301 EVAMSRGMTFPRPCWWPEEYGSNGLEKKK 329

[Close]

BLAST of Csa1G042410 vs. NCBI nr
Match: gi|659095815|ref|XP_008448781.1| (PREDICTED: uncharacterized protein LOC103490847 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-21
Identity = 99/326 (30.37%), Postives = 151/326 (46.32%), Query Frame = 1


Query: 24  DILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTASPPESLEQREQLISPDACQPPPEQ 83
           ++ R C F G  N    S    S+ +    T +   S P+S+E+++  + P + Q  PE+
Sbjct: 17  NVFRRCPFTG--NIYSDSDSSDSEAVPVESTGIFMLSLPDSMEEKDDSL-PHSFQTAPEE 76

Query: 84  -----SGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELG-FLEVQSTRQT-- 143
                S GRR +  D   V+ +   V  G        VDLG++ ++G + EVQST +T  
Sbjct: 77  LAPTGSDGRRSLAADSTGVEVSFEYVDDG------KAVDLGRDTDVGLYSEVQSTTETVE 136

Query: 144 --DGIEIIGVRRSKVSESGTDGE---------AESASKRLKLSNEALGKDSSVPFVGLLI 203
               IE+IG R S  SE+   G           ES+SK+L+LS EALG  S     G   
Sbjct: 137 KGKTIEVIGARGSHSSETKKSGILFEESVVSLGESSSKKLRLSEEALGLSSG----GSHN 196

Query: 204 EKSVPVGEESGKIDDGKVSNGE--ETHCNKNKQNLTEKKVENSQPEVPGEYDGVMNRDAG 263
           +       +    DDGKVSN E  E  CN  K+   EK+V+ S   +          +  
Sbjct: 197 DDDCSGKYKLKGTDDGKVSNDENDENQCNY-KEKSAEKEVKESVKNIQSPQQNKFQEEIA 256

Query: 264 R--ETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERSD------EDEKL 321
              ++   +L   ++  K + A     +     I + +LKIL  ++         +DE L
Sbjct: 257 NAHQSCCRVLPPSMTGVKKNAAEERFNTSEDQPIEVTLLKILMILKGEQVNVIEFDDETL 316

[Close]

BLAST of Csa1G042410 vs. NCBI nr
Match: gi|700200692|gb|KGN55825.1| (hypothetical protein Csa_3G017190 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 3.2e-21
Identity = 101/338 (29.88%), Postives = 158/338 (46.75%), Query Frame = 1


Query: 17  LISHSQEDILRHCSFAGA----PNSLDASRFPPSQFLHPYPTPVSTASPPESLEQREQLI 76
           +++ S  ++LR C F G      +S D+  FP         T +   S P+S+E+++  +
Sbjct: 10  IVTGSPVNVLRRCPFTGNVYSDSDSSDSEAFPVES------TGIFMLSLPDSMEEKDDSL 69

Query: 77  SPDACQPPPEQ-----SGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELG-F 136
            P + Q  PE+     S  RR +  D   V+ +   V  G        VDLG++ ++G +
Sbjct: 70  -PHSFQTAPEELAPNGSDERRSLAADSTGVEVSFEYVDDG------KAVDLGRDTDVGLY 129

Query: 137 LEVQSTRQT----DGIEIIGVRRSKVSESGTDGE---------AESASKRLKLSNEALGK 196
            EVQST +T      I +IGV  S  SE    G           ES+SK+L+LS EALG 
Sbjct: 130 SEVQSTTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALGL 189

Query: 197 DSSVPFVGLLIEKSVPVGEESGKIDDGKVSNGE--ETHCN---KNKQNLTEKKVENSQPE 256
            S     G   +       +    DDGK+SN E  E  CN   K+ +N  ++ V+N +  
Sbjct: 190 SSG----GSHNDDDCSGKYKLKGTDDGKISNDENDENQCNYKEKSAENEVKESVKNIESH 249

Query: 257 VPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEILKILSQVERS 316
              ++   +      ++   +L   IS  KN+ A     +     I + +LKIL  ++  
Sbjct: 250 QQNKFQEEIAN--AHQSCCRVLPPSISGVKNNAAEERSNTSEDQPIEVTLLKILMILKGG 309

Query: 317 DE------DEKLADMNLIEVAMSRGMTFPRPCWWPEEY 321
            +      DE L+ ++++E+A  RGMTFPRP WWP EY
Sbjct: 310 QDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 328

[Close]

BLAST of Csa1G042410 vs. NCBI nr
Match: gi|731437389|ref|XP_010646741.1| (PREDICTED: uncharacterized protein LOC104878305 isoform X2 [Vitis vinifera])

HSP 1 Score: 81.3 bits (199), Expect = 3.6e-12
Identity = 104/378 (27.51%), Postives = 156/378 (41.27%), Query Frame = 1


Query: 7   DPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTASPPESLE 66
           DPF SL + C IS SQED+LR+C F    +       P S  +    + +   S PES  
Sbjct: 3   DPFQSLLEPCHISSSQEDLLRNCPFTRQSHDGSGEDSPDSGGVPVESSGIIMLSLPES-- 62

Query: 67  QREQLISPDACQPPPEQ------SGGRRP-------VVVDDPSVQDAAAAVGGGCVSNVP 126
             E+    D  Q PPE+      +  R P       V VDD      AA V   C     
Sbjct: 63  TYEETTPQDEFQTPPEEVQPASSAEQRAPAFDRQHEVWVDDDKEGSVAADV--SCTDGAA 122

Query: 127 TGVDLGKNDELGFLEVQSTRQTDGI-EIIGVRRSKVSESGTD------GEAESASKRLKL 186
           T V+LGK+ +LGF    S  +   +  + GV  S+VSESG +        ++ AS  L +
Sbjct: 123 T-VELGKDSDLGFSGPTSAVKVVAVSNVDGVGASEVSESGVEKCRVLLRGSQEASGNLNI 182

Query: 187 SNEALGKDSSVPFVG------LLIE----KSVPVGEESGKIDDGKVSN-GEETHCNKNKQ 246
           ++ + G  +++          +LIE    K  P   ES   D G VS  GE+     +  
Sbjct: 183 NSVSPGNCNTISPQNNQGNEIMLIEDTLVKKKPCFPESEFEDTGGVSGLGEDPMKTDSDV 242

Query: 247 NLTEKK-VENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSG-NS 306
           ++T+++ VEN +         ++    GR+T+   +  L   EK      S  +G     
Sbjct: 243 DVTKREGVENGKSNGDVSEGDILQSIVGRDTIRKNIEDL---EKFKYIIRSVRNGPPLPP 302

Query: 307 IIMEI--------LKILSQVERSDED--------------------------EKLADMNL 318
           ++ E+        L I   VE +  D                          E+  + ++
Sbjct: 303 LLSEVPQARRELPLSICGPVEDAARDSVTGNRQQVTVVDVLKILCGECDWNPEETEETDI 362

[Close]

BLAST of Csa1G042410 vs. NCBI nr
Match: gi|645265905|ref|XP_008238375.1| (PREDICTED: uncharacterized protein LOC103337017 [Prunus mume])

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-10
Identity = 91/304 (29.93%), Postives = 128/304 (42.11%), Query Frame = 1


Query: 54  TPVSTASPPESLEQRE---QLISPDACQPPPEQS-----GGRRPVVV-----DDPSVQDA 113
           T +   SPPES E  E      S D  Q PPE S      G+ P++      DDP  +D 
Sbjct: 26  TGIIMVSPPESSEVDEAHNNRASQDVFQTPPEYSYPPTSEGKTPLLEVNTSDDDPPYEDV 85

Query: 114 AAAVGGGCVSNVPTG-VDLGKNDELGFLEVQSTRQTDGIEIIGVRRSKVSESGTDGEAES 173
               G        TG VDLG + +LGF E  +           V R ++S  G  G  E 
Sbjct: 86  GDGRGVIVAFGEGTGAVDLGGDTDLGFAEAAAVE-------FRVLRRELSPEG--GLLEP 145

Query: 174 ASKRLKLSNEALGKDSSVPFVGLLIEKSVPVGEESGKIDDGKVSNGEETHCNK---NKQN 233
             K+LK S   LGK           E S     ES +ID    S+GEE    +   +  N
Sbjct: 146 PLKKLKDSEHNLGK----------FEPSCS-STESLEIDGCDESSGEEGSEERKLDSSDN 205

Query: 234 LTEKKVENSQPEVPGEYDGVMNRDAGRETLISIL----NGLISKEKNDDATSSG------ 293
            +E  VE +      +   V   D G E L  ++    N  I + +  D+   G      
Sbjct: 206 ESESAVEETLLNSDEKDSVVEMEDGGEECLDDVMRSTPNVTIEELRRIDSPWRGRALPRS 265

Query: 294 --ESGSG---------NSI-IMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPC 319
             ++GS          N + I+++LK+L   ++ D D  + + +  E++ SRGMTFPRP 
Sbjct: 266 IVQAGSSAMDGEDMVQNEVAILDVLKLLK--DKYDGDGVVDNRSFWEISRSRGMTFPRPS 307

The following BLAST results are available for this feature:

BLAST of Csa1G042410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT00_CUCSA	4.5e-187	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042410 PE=4 SV=1	[more]
A0A0A0L1F4_CUCSA	2.3e-21	29.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017190 PE=4 SV=1	[more]
W9RXT1_9ROSA	5.8e-09	28.28	Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1	[more]
W9RXT1_9ROSA	7.8e-06	29.71	Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1	[more]
V4TJ52_9ROSI	1.1e-07	27.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020707mg PE=4 SV=1	[more]

BLAST of Csa1G042410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209033\|gb\|KGN64129.1\|	6.4e-187	100.00	hypothetical protein Csa_1G042410 [Cucumis sativus]	[more]
gi\|659095815\|ref\|XP_008448781.1\|	2.5e-21	30.37	PREDICTED: uncharacterized protein LOC103490847 [Cucumis melo]	[more]
gi\|700200692\|gb\|KGN55825.1\|	3.2e-21	29.88	hypothetical protein Csa_3G017190 [Cucumis sativus]	[more]
gi\|731437389\|ref\|XP_010646741.1\|	3.6e-12	27.51	PREDICTED: uncharacterized protein LOC104878305 isoform X2 [Vitis vinifera]	[more]
gi\|645265905\|ref\|XP_008238375.1\|	3.4e-10	29.93	PREDICTED: uncharacterized protein LOC103337017 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU131592	cucumber EST collection version 3.0	transcribed_cluster
CU163360	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G042410.1	Csa1G042410.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU163360	CU163360	transcribed_cluster
CU131592	CU131592	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G042410	Cla018496	Watermelon (97103) v1	cuwmB062
Csa1G042410	MELO3C002095	Melon (DHL92) v3.5.1	cumeB027
Csa1G042410	ClCG04G011020	Watermelon (Charleston Gray)	cuwcgB057
Csa1G042410	Lsi02G001880	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G042410	MELO3C002095.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G042410	Cla97C04G077910	Watermelon (97103) v2	cuwmbB054
Csa1G042410	Bhi08G001028	Wax gourd	cuwgoB028
Csa1G042410	CSPI01G06840	Wild cucumber (PI 183967)	cpicuB000
Csa1G042410	Cucsa.121550	Cucumber (Gy14) v1	cgycuB159
Csa1G042410	CmaCh13G010180	Cucurbita maxima (Rimu)	cmacuB217
Csa1G042410	CmoCh13G010590	Cucurbita moschata (Rifu)	cmocuB202
Csa1G042410	Cp4.1LG20g01320	Cucurbita pepo (Zucchini)	cpecuB505
Csa1G042410	Carg04820	Silver-seed gourd	carcuB0415

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G042410	Watermelon (97103) v2	cuwmbB080
Csa1G042410	Wax gourd	cuwgoB014
Csa1G042410	Cucumber (Chinese Long) v2	cucuB031
Csa1G042410	Cucumber (Chinese Long) v2	cucuB000
Csa1G042410	Cucumber (Gy14) v1	cgycuB139
Csa1G042410	Cucumber (Gy14) v1	cgycuB406
Csa1G042410	Cucurbita maxima (Rimu)	cmacuB056
Csa1G042410	Cucurbita maxima (Rimu)	cmacuB088
Csa1G042410	Cucurbita maxima (Rimu)	cmacuB406
Csa1G042410	Cucurbita maxima (Rimu)	cmacuB390
Csa1G042410	Cucurbita moschata (Rifu)	cmocuB046
Csa1G042410	Cucurbita moschata (Rifu)	cmocuB077
Csa1G042410	Cucurbita moschata (Rifu)	cmocuB380
Csa1G042410	Cucurbita moschata (Rifu)	cmocuB395
Csa1G042410	Melon (DHL92) v3.5.1	cumeB011
Csa1G042410	Melon (DHL92) v3.5.1	cumeB056
Csa1G042410	Watermelon (Charleston Gray)	cuwcgB064
Csa1G042410	Watermelon (Charleston Gray)	cuwcgB083
Csa1G042410	Watermelon (97103) v1	cuwmB040
Csa1G042410	Watermelon (97103) v1	cuwmB096
Csa1G042410	Cucurbita pepo (Zucchini)	cpecuB028
Csa1G042410	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G042410	Cucurbita pepo (Zucchini)	cpecuB369
Csa1G042410	Cucurbita pepo (Zucchini)	cpecuB655
Csa1G042410	Bottle gourd (USVL1VR-Ls)	culsiB072
Csa1G042410	Cucumber (Gy14) v2	cgybcuB001
Csa1G042410	Cucumber (Gy14) v2	cgybcuB004
Csa1G042410	Cucumber (Gy14) v2	cgybcuB199
Csa1G042410	Melon (DHL92) v3.6.1	cumedB006
Csa1G042410	Melon (DHL92) v3.6.1	cumedB048
Csa1G042410	Silver-seed gourd	carcuB0542
Csa1G042410	Silver-seed gourd	carcuB0623
Csa1G042410	Silver-seed gourd	carcuB0802