CmaCh13G010180 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G010180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr13 : 7815727 .. 7816773 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTAATGGCGACGATCCTTTTGATTCACTCACCAAACTCTGCGTCCTCTCTGACTCCCAAGAGGACATTTTACGTCGCTGCTCTTTCGCCGGCAACCCCGAATCCGTCGATGGCTCTTGTTCTACCTACTCCCAAATCCATCAGCTTCTTCAGCCCACTGGTCTTTTCATGGCTTCTCTTCCGGAGAGTTTGGAACGGAGAGAGCAAATCACCTCTCATAATGCTTACCAGGCTCCACCGGAACAGTCCGGAGGGCAGCGGCCCATGGCTGAAGATGATCCTTCTCTTCAAGATGCGGCGGTGGTCGCTGGCGGTGCTGAGGCGGCTGTTGAAGGCGGATGTGTGCGCGATGTTGCCACTGCAGTTGATTTGGGGAAAAACGATGACCTAGGGTTTCGTTTGGAAGTTCAATCGACACAACAGATTGATGAAATCGAAATTATTGGTGTTCGTAGGAGAAAGGTTTCGGAGTCTGATGCTGGTGGAGAGCGTGAATCGGCATCGAAAAGGTTGAATTTTTCGAATGAAGCTTTGGGCACAGACTCTTCCGTCCCAATCGTAGTAGAAAAATTACCAGTCGATCTCGAGTCCGGTGGAGGATCGAAACTCGTAGATCACAATGTCGAAATGGCTGAGGAATCGGCAACCGTCGCTGTAGAATCCGGCAAGGTAGACGATGGAAAGGTCTCCAATGGCGAAGAAACTCACTGTAATAAGAACAAGGAAAAATTTGCAGAGAACAGAGTCGAAAATTCCCAACCCGATGAACCGTGCAACTACGAAGGAACAATGTATCGCGATCGATGGAGGTGCGTTCTGCCATCAACAATGAATGGATCGAAGAATTCGGAGGAGACTGATGCAACGCTCCCATCCATTATTATGGAAATTTTAAAGCTTCTGGCAGAAGAGGAAGGTGAAGAAGACAAGGAATTGGCAAGTATGAGCATATTGGAAGTCGTATCCCGCCGTGGAATGACATTTCCTCGGCCATGTTGGTGGCCGGAGGGGCAGGAATTCAGCTTCAAGAAGAAAAGTTGA

mRNA sequence

ATGGATGGTAATGGCGACGATCCTTTTGATTCACTCACCAAACTCTGCGTCCTCTCTGACTCCCAAGAGGACATTTTACGTCGCTGCTCTTTCGCCGGCAACCCCGAATCCGTCGATGGCTCTTGTTCTACCTACTCCCAAATCCATCAGCTTCTTCAGCCCACTGGTCTTTTCATGGCTTCTCTTCCGGAGAGTTTGGAACGGAGAGAGCAAATCACCTCTCATAATGCTTACCAGGCTCCACCGGAACAGTCCGGAGGGCAGCGGCCCATGGCTGAAGATGATCCTTCTCTTCAAGATGCGGCGGTGGTCGCTGGCGGTGCTGAGGCGGCTGTTGAAGGCGGATGTGTGCGCGATGTTGCCACTGCAGTTGATTTGGGGAAAAACGATGACCTAGGGTTTCGTTTGGAAGTTCAATCGACACAACAGATTGATGAAATCGAAATTATTGGTGTTCGTAGGAGAAAGGTTTCGGAGTCTGATGCTGGTGGAGAGCGTGAATCGGCATCGAAAAGGTTGAATTTTTCGAATGAAGCTTTGGGCACAGACTCTTCCGTCCCAATCGTAGTAGAAAAATTACCAGTCGATCTCGAGTCCGGTGGAGGATCGAAACTCGTAGATCACAATGTCGAAATGGCTGAGGAATCGGCAACCGTCGCTGTAGAATCCGGCAAGGTAGACGATGGAAAGGTCTCCAATGGCGAAGAAACTCACTGTAATAAGAACAAGGAAAAATTTGCAGAGAACAGAGTCGAAAATTCCCAACCCGATGAACCGTGCAACTACGAAGGAACAATGTATCGCGATCGATGGAGGTGCGTTCTGCCATCAACAATGAATGGATCGAAGAATTCGGAGGAGACTGATGCAACGCTCCCATCCATTATTATGGAAATTTTAAAGCTTCTGGCAGAAGAGGAAGGTGAAGAAGACAAGGAATTGGCAAGTATGAGCATATTGGAAGTCGTATCCCGCCGTGGAATGACATTTCCTCGGCCATGTTGGTGGCCGGAGGGGCAGGAATTCAGCTTCAAGAAGAAAAGTTGA

Coding sequence (CDS)

ATGGATGGTAATGGCGACGATCCTTTTGATTCACTCACCAAACTCTGCGTCCTCTCTGACTCCCAAGAGGACATTTTACGTCGCTGCTCTTTCGCCGGCAACCCCGAATCCGTCGATGGCTCTTGTTCTACCTACTCCCAAATCCATCAGCTTCTTCAGCCCACTGGTCTTTTCATGGCTTCTCTTCCGGAGAGTTTGGAACGGAGAGAGCAAATCACCTCTCATAATGCTTACCAGGCTCCACCGGAACAGTCCGGAGGGCAGCGGCCCATGGCTGAAGATGATCCTTCTCTTCAAGATGCGGCGGTGGTCGCTGGCGGTGCTGAGGCGGCTGTTGAAGGCGGATGTGTGCGCGATGTTGCCACTGCAGTTGATTTGGGGAAAAACGATGACCTAGGGTTTCGTTTGGAAGTTCAATCGACACAACAGATTGATGAAATCGAAATTATTGGTGTTCGTAGGAGAAAGGTTTCGGAGTCTGATGCTGGTGGAGAGCGTGAATCGGCATCGAAAAGGTTGAATTTTTCGAATGAAGCTTTGGGCACAGACTCTTCCGTCCCAATCGTAGTAGAAAAATTACCAGTCGATCTCGAGTCCGGTGGAGGATCGAAACTCGTAGATCACAATGTCGAAATGGCTGAGGAATCGGCAACCGTCGCTGTAGAATCCGGCAAGGTAGACGATGGAAAGGTCTCCAATGGCGAAGAAACTCACTGTAATAAGAACAAGGAAAAATTTGCAGAGAACAGAGTCGAAAATTCCCAACCCGATGAACCGTGCAACTACGAAGGAACAATGTATCGCGATCGATGGAGGTGCGTTCTGCCATCAACAATGAATGGATCGAAGAATTCGGAGGAGACTGATGCAACGCTCCCATCCATTATTATGGAAATTTTAAAGCTTCTGGCAGAAGAGGAAGGTGAAGAAGACAAGGAATTGGCAAGTATGAGCATATTGGAAGTCGTATCCCGCCGTGGAATGACATTTCCTCGGCCATGTTGGTGGCCGGAGGGGCAGGAATTCAGCTTCAAGAAGAAAAGTTGA

Protein sequence

MDGNGDDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPESLERREQITSHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRDVATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGERESASKRLNFSNEALGTDSSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGEETHCNKNKEKFAENRVENSQPDEPCNYEGTMYRDRWRCVLPSTMNGSKNSEETDATLPSIIMEILKLLAEEEGEEDKELASMSILEVVSRRGMTFPRPCWWPEGQEFSFKKKS

Homology

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BLAST of CmaCh13G010180 vs. TrEMBL
Match: A0A0A0LT00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042410 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 8.6e-88
Identity = 199/348 (57.18%), Postives = 233/348 (66.95%), Query Frame = 1


Query: 1   MDGNGDDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQ-IHQLLQPTGLFM 60
           MDG+  DPFDSL KLC++S SQEDILR CSFAG P S+D S    SQ +H    PT +  
Sbjct: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPY--PTPVST 60

Query: 61  ASLPESLERREQITSHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRD 120
           AS PESLE+REQ+ S +A Q PPEQSGG+RP+  DDPS+QDAA       AAV GGCV +
Sbjct: 61  ASPPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAA-------AAVGGGCVSN 120

Query: 121 VATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGERESASKRLNFSNEA 180
           V T VDLGKND+LGF LEVQST+Q D IEIIGVRR KVSES   GE ESASKRL  SNEA
Sbjct: 121 VPTGVDLGKNDELGF-LEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEA 180

Query: 181 LGTDSSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGEETHC 240
           LG DSSVP V                      + E+S  V  ESGK+DDGKVSNGEETHC
Sbjct: 181 LGKDSSVPFVGL--------------------LIEKSVPVGEESGKIDDGKVSNGEETHC 240

Query: 241 NKNKEKFAENRVENSQPDEPCNYEGTMYRDRWRCVLPSTMNGSKNSEETDATLP------ 300
           NKNK+   E +VENSQP+ P  Y+G M RD  R  L S +NG  + E+ D          
Sbjct: 241 NKNKQNLTEKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGS 300

Query: 301 --SIIMEILKLLAE-EEGEEDKELASMSILEVVSRRGMTFPRPCWWPE 339
             SIIMEILK+L++ E  +ED++LA M+++EV   RGMTFPRPCWWPE
Sbjct: 301 GNSIIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPE 318

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BLAST of CmaCh13G010180 vs. TrEMBL
Match: A0A0A0L1F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017190 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.0e-21
Identity = 116/353 (32.86%), Postives = 169/353 (47.88%), Query Frame = 1


Query: 17  VLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPESLERREQITSHN 76
           +++ S  ++LRRC F GN  S   S S+ S+   + + TG+FM SLP+S+E ++    H+
Sbjct: 10  IVTGSPVNVLRRCPFTGNVYS--DSDSSDSEAFPV-ESTGIFMLSLPDSMEEKDDSLPHS 69

Query: 77  AYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRDVATAVDLGKNDDLGFRL 136
              AP E +    P   D+   +  A  + G E + E     D   AVDLG++ D+G   
Sbjct: 70  FQTAPEELA----PNGSDE--RRSLAADSTGVEVSFE---YVDDGKAVDLGRDTDVGLYS 129

Query: 137 EVQSTQQIDE----IEIIGVRRRKVSESDAGG---------ERESASKRLNFSNEALGTD 196
           EVQST +  E    I +IGV     SE    G           ES+SK+L  S EALG  
Sbjct: 130 EVQSTTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALG-- 189

Query: 197 SSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGE--ETHCNK 256
                        L SGG      HN    ++  +   +    DDGK+SN E  E  CN 
Sbjct: 190 -------------LSSGG-----SHN----DDDCSGKYKLKGTDDGKISNDENDENQCN- 249

Query: 257 NKEKFAENR----VENSQPDEPCNYEGTMYRDRWRC--VLPSTMNGSKNSEETDATLPS- 316
            KEK AEN     V+N +  +   ++  +      C  VLP +++G KN+   + +  S 
Sbjct: 250 YKEKSAENEVKESVKNIESHQQNKFQEEIANAHQSCCRVLPPSISGVKNNAAEERSNTSE 309

Query: 317 ---IIMEILKLLAEEEGE-------EDKELASMSILEVVSRRGMTFPRPCWWP 338
              I + +LK+L   +G        +D+ L+ +SILE+   RGMTFPRP WWP
Sbjct: 310 DQPIEVTLLKILMILKGGQDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWP 325

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BLAST of CmaCh13G010180 vs. TrEMBL
Match: B9SYZ7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0120770 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.0e-16
Identity = 110/388 (28.35%), Postives = 175/388 (45.10%), Query Frame = 1


Query: 1   MDGNGDDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQP---TGL 60
           MD NG  PF S+ +LC +S SQE++L+RC FAG PE+ D S S  S  +    P   TG+
Sbjct: 1   MDNNG--PFASIAELCHISSSQEELLKRCRFAGEPET-DESLSDESGENDDTTPVESTGI 60

Query: 61  FMASLPESLERREQITSHN------AYQAPPEQS----GGQRPMAEDDPSLQDAAVVAGG 120
            M S PES E  E+    N       +  PPE+S      +  + +   S +D  V+   
Sbjct: 61  MMISPPESPEEEEEEDHENIPRDNDVFHTPPEESTLATSQEHELHQRVDSHEDRMVL--- 120

Query: 121 AEAAVEGGCVRDVATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGERE 180
            +  +E     + +TAVDLG++ DLGF  EV+ T++I+      V      E     +RE
Sbjct: 121 GDEKIEASLTDNDSTAVDLGRDTDLGFSTEVELTERIEVDSGTDVNSILEGEDFRVLKRE 180

Query: 181 SASKRLNFSNEALGTDSSVPI-VVEKLPVDLESGGGSKLVDHN----------------V 240
             SK +   N     ++S P        +   +GG ++  + +                 
Sbjct: 181 LDSKTVEAENLGKSVENSSPSNSPNNHQIQQVNGGDNREFNGDSSAKRKLEFCAYGVVES 240

Query: 241 EMAEESATVAVESGKVDDG--KVSNGEETHC------NKNKEKFAE--NRVENSQPDEPC 300
           EM E S  +    G+++DG  ++ + +   C       K KE+ A+  + ++  +   P 
Sbjct: 241 EMGENSVGLGFNKGRIEDGTEEIEDDDSERCLDASSAEKRKEREAKSIDDIDKFRYVPPT 300

Query: 301 NYEGTMYRDRWRCV-----LPSTM---NGSKNSEETDATLPS---------IIMEILKLL 332
           N       ++ +CV     LP +M   NG   SE     +PS          ++E+LK+L
Sbjct: 301 NANSL---EKQKCVGAKRALPMSMCVNNGCAESEVVPDGVPSPKSYEEVVFTLLEVLKML 360

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BLAST of CmaCh13G010180 vs. TrEMBL
Match: V4TJ52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020707mg PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.0e-11
Identity = 102/383 (26.63%), Postives = 163/383 (42.56%), Query Frame = 1


Query: 6   DDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPES 65
           DDPF S+TKLC +S SQE+ LR C F G PE    +     +     Q TG+ M + P+S
Sbjct: 4   DDPFASITKLCQVSSSQEEHLRHCRFVGEPEEDPQASGEIDE-----QLTGIMMITPPDS 63

Query: 66  LERREQ-----ITSHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRDV 125
           +   ++     +  +  +  PPE +     ++  D    +  VV    E   EGGC    
Sbjct: 64  MSDNDENDNNALKDNEIFHTPPEDT----LISSSDDHRDNQRVV---IEEEAEGGCTEGE 123

Query: 126 ATAVDLGKNDDLGFRLEVQSTQQI--------DEIEIIGVRRRKVSESDAGGERESASKR 185
            T VDLG + DLGF  EV+ TQ+          E+  I V +R+++ S+     ES  K+
Sbjct: 124 KT-VDLGTDTDLGF-TEVELTQRSGSANEVIQSELNKIRVLKRELAASER--LIESLKKK 183

Query: 186 LNFSNEALGTDSSVPIV---VEKLPVDLESGGGSKLVDHNVEMAEESATVAVESG----- 245
              S+ +  ++S    +   V+K+   LE    +K   +N E     +  + E+      
Sbjct: 184 SKISDNSFRSESPKRCLGESVKKIMKSLEKLNSNKGSPYNHEYKSHQSNQSSEASGDSSS 243

Query: 246 --KVDDGKVSNGEETHCNKNKEKFAE------------NRVENSQPDEPCNYEGTMYR-- 305
             K+D    + G ET       +F+E              V N+   +  +  G   +  
Sbjct: 244 KRKLDFSTDNLGLETEATDRDLRFSEGLERIIRNGEGYRSVGNNGNGKGTSISGRKSKED 303

Query: 306 -DRWRCVLPSTMNGSKNSEETDA--TLPSII-----------------MEILKLLAEEEG 332
            D++R   PS  N  +    T A  +LP  I                 +++L++LA    
Sbjct: 304 IDKYRYTGPSVHNSCEMGRRTRAIRSLPVTICGKGERDARNDYKEITLLDVLRMLA-RNC 363

[Close]

BLAST of CmaCh13G010180 vs. TrEMBL
Match: W9RXT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 86/273 (31.50%), Postives = 124/273 (45.42%), Query Frame = 1


Query: 1   MDGNG----DDPFDSLTKLCVLSDSQEDILRRCSFAG---NPESVDGSCSTYSQIHQLLQ 60
           MDG G    +DPF SL  LC +S SQE+ LRRC FA    NPE+   S  +  +I   L 
Sbjct: 1   MDGGGAIAGNDPFGSLLPLCQISSSQEERLRRCPFAPERYNPENDGSSSESTGEIP--LA 60

Query: 61  PTGLFMASLPESLERREQITSHNAYQAPPEQSGGQ-----RPMAEDDPSLQDAAVVAGGA 120
            TG+ M S PES E      S + +  PPE+S  Q     RP  + D          GG 
Sbjct: 61  STGIVMVSPPESEEDENNSNSRDVFHTPPEESAAQSSNEVRPTVDVDGCDLGRRSPDGGG 120

Query: 121 EAAVEGGCVRDVATA---VDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGE 180
           E    G    D   A   VDL ++ DLGF  EVQ TQ+  E   + + R  V       E
Sbjct: 121 ETVAIGIGSSDANCAGGTVDLSRDSDLGFS-EVQLTQR--ENAYLDLNRSLVQVL----E 180

Query: 181 RESASKRLNFSNEALGTDSSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGK 240
            ES   R+  + E    D      ++KL V +++     L + + E+  E AT A  S  
Sbjct: 181 TESTRARV-LTRELSLVDGLGESPLKKLKVSVQN-----LEESDEELEPERATSANHSSD 240

Query: 241 VDDGKVSNGEETHCNKNKEKFAENRVENSQPDE 259
            ++   ++GE+      ++  A+ ++E +  D+
Sbjct: 241 SNENLENDGED--AKSGEQSSAKRKLEFTDNDD 256

[Close]

BLAST of CmaCh13G010180 vs. NCBI nr
Match: gi|700209033|gb|KGN64129.1| (hypothetical protein Csa_1G042410 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87
Identity = 199/348 (57.18%), Postives = 233/348 (66.95%), Query Frame = 1


Query: 1   MDGNGDDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQ-IHQLLQPTGLFM 60
           MDG+  DPFDSL KLC++S SQEDILR CSFAG P S+D S    SQ +H    PT +  
Sbjct: 1   MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPY--PTPVST 60

Query: 61  ASLPESLERREQITSHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRD 120
           AS PESLE+REQ+ S +A Q PPEQSGG+RP+  DDPS+QDAA       AAV GGCV +
Sbjct: 61  ASPPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAA-------AAVGGGCVSN 120

Query: 121 VATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGERESASKRLNFSNEA 180
           V T VDLGKND+LGF LEVQST+Q D IEIIGVRR KVSES   GE ESASKRL  SNEA
Sbjct: 121 VPTGVDLGKNDELGF-LEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEA 180

Query: 181 LGTDSSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGEETHC 240
           LG DSSVP V                      + E+S  V  ESGK+DDGKVSNGEETHC
Sbjct: 181 LGKDSSVPFVGL--------------------LIEKSVPVGEESGKIDDGKVSNGEETHC 240

Query: 241 NKNKEKFAENRVENSQPDEPCNYEGTMYRDRWRCVLPSTMNGSKNSEETDATLP------ 300
           NKNK+   E +VENSQP+ P  Y+G M RD  R  L S +NG  + E+ D          
Sbjct: 241 NKNKQNLTEKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGS 300

Query: 301 --SIIMEILKLLAE-EEGEEDKELASMSILEVVSRRGMTFPRPCWWPE 339
             SIIMEILK+L++ E  +ED++LA M+++EV   RGMTFPRPCWWPE
Sbjct: 301 GNSIIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPE 318

[Close]

BLAST of CmaCh13G010180 vs. NCBI nr
Match: gi|659095815|ref|XP_008448781.1| (PREDICTED: uncharacterized protein LOC103490847 [Cucumis melo])

HSP 1 Score: 116.7 bits (291), Expect = 8.1e-23
Identity = 116/349 (33.24%), Postives = 162/349 (46.42%), Query Frame = 1


Query: 24  DILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPESLERREQITSHNAYQAP-- 83
           ++ RRC F GN  S D   S    +   ++ TG+FM SLP+S+E ++    H+   AP  
Sbjct: 17  NVFRRCPFTGNIYS-DSDSSDSEAVP--VESTGIFMLSLPDSMEEKDDSLPHSFQTAPEE 76

Query: 84  --PEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRDVATAVDLGKNDDLGFRLEVQ 143
             P  S G+R +A D            G E + E     D   AVDLG++ D+G   EVQ
Sbjct: 77  LAPTGSDGRRSLAADST----------GVEVSFE---YVDDGKAVDLGRDTDVGLYSEVQ 136

Query: 144 STQQIDE----IEIIGVRRRKVSESDAGGER---------ESASKRLNFSNEALGTDSSV 203
           ST +  E    IE+IG R    SE+   G           ES+SK+L  S EALG     
Sbjct: 137 STTETVEKGKTIEVIGARGSHSSETKKSGILFEESVVSLGESSSKKLRLSEEALG----- 196

Query: 204 PIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGE--ETHCN---K 263
                     L SGG      HN    ++  +   +    DDGKVSN E  E  CN   K
Sbjct: 197 ----------LSSGGS-----HN----DDDCSGKYKLKGTDDGKVSNDENDENQCNYKEK 256

Query: 264 NKEKFAENRVENSQPDEPCNYEGTMYRDRWRC--VLPSTMNG-SKNSEET------DATL 323
           + EK  +  V+N Q  +   ++  +      C  VLP +M G  KN+ E       D  +
Sbjct: 257 SAEKEVKESVKNIQSPQQNKFQEEIANAHQSCCRVLPPSMTGVKKNAAEERFNTSEDQPI 316

Query: 324 PSIIMEILKLLAEEEGE----EDKELASMSILEVVSRRGMTFPRPCWWP 338
              +++IL +L  E+      +D+ L+ +SILE+   RGMTFPRP WWP
Sbjct: 317 EVTLLKILMILKGEQVNVIEFDDETLSKLSILEIAQLRGMTFPRPEWWP 325

[Close]

BLAST of CmaCh13G010180 vs. NCBI nr
Match: gi|700200692|gb|KGN55825.1| (hypothetical protein Csa_3G017190 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 116/353 (32.86%), Postives = 169/353 (47.88%), Query Frame = 1


Query: 17  VLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPESLERREQITSHN 76
           +++ S  ++LRRC F GN  S   S S+ S+   + + TG+FM SLP+S+E ++    H+
Sbjct: 10  IVTGSPVNVLRRCPFTGNVYS--DSDSSDSEAFPV-ESTGIFMLSLPDSMEEKDDSLPHS 69

Query: 77  AYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGCVRDVATAVDLGKNDDLGFRL 136
              AP E +    P   D+   +  A  + G E + E     D   AVDLG++ D+G   
Sbjct: 70  FQTAPEELA----PNGSDE--RRSLAADSTGVEVSFE---YVDDGKAVDLGRDTDVGLYS 129

Query: 137 EVQSTQQIDE----IEIIGVRRRKVSESDAGG---------ERESASKRLNFSNEALGTD 196
           EVQST +  E    I +IGV     SE    G           ES+SK+L  S EALG  
Sbjct: 130 EVQSTTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALG-- 189

Query: 197 SSVPIVVEKLPVDLESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGE--ETHCNK 256
                        L SGG      HN    ++  +   +    DDGK+SN E  E  CN 
Sbjct: 190 -------------LSSGG-----SHN----DDDCSGKYKLKGTDDGKISNDENDENQCN- 249

Query: 257 NKEKFAENR----VENSQPDEPCNYEGTMYRDRWRC--VLPSTMNGSKNSEETDATLPS- 316
            KEK AEN     V+N +  +   ++  +      C  VLP +++G KN+   + +  S 
Sbjct: 250 YKEKSAENEVKESVKNIESHQQNKFQEEIANAHQSCCRVLPPSISGVKNNAAEERSNTSE 309

Query: 317 ---IIMEILKLLAEEEGE-------EDKELASMSILEVVSRRGMTFPRPCWWP 338
              I + +LK+L   +G        +D+ L+ +SILE+   RGMTFPRP WWP
Sbjct: 310 DQPIEVTLLKILMILKGGQDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWP 325

[Close]

BLAST of CmaCh13G010180 vs. NCBI nr
Match: gi|223529176|gb|EEF31152.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 94.4 bits (233), Expect = 4.3e-16
Identity = 110/388 (28.35%), Postives = 175/388 (45.10%), Query Frame = 1


Query: 1   MDGNGDDPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQP---TGL 60
           MD NG  PF S+ +LC +S SQE++L+RC FAG PE+ D S S  S  +    P   TG+
Sbjct: 1   MDNNG--PFASIAELCHISSSQEELLKRCRFAGEPET-DESLSDESGENDDTTPVESTGI 60

Query: 61  FMASLPESLERREQITSHN------AYQAPPEQS----GGQRPMAEDDPSLQDAAVVAGG 120
            M S PES E  E+    N       +  PPE+S      +  + +   S +D  V+   
Sbjct: 61  MMISPPESPEEEEEEDHENIPRDNDVFHTPPEESTLATSQEHELHQRVDSHEDRMVL--- 120

Query: 121 AEAAVEGGCVRDVATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGERE 180
            +  +E     + +TAVDLG++ DLGF  EV+ T++I+      V      E     +RE
Sbjct: 121 GDEKIEASLTDNDSTAVDLGRDTDLGFSTEVELTERIEVDSGTDVNSILEGEDFRVLKRE 180

Query: 181 SASKRLNFSNEALGTDSSVPI-VVEKLPVDLESGGGSKLVDHN----------------V 240
             SK +   N     ++S P        +   +GG ++  + +                 
Sbjct: 181 LDSKTVEAENLGKSVENSSPSNSPNNHQIQQVNGGDNREFNGDSSAKRKLEFCAYGVVES 240

Query: 241 EMAEESATVAVESGKVDDG--KVSNGEETHC------NKNKEKFAE--NRVENSQPDEPC 300
           EM E S  +    G+++DG  ++ + +   C       K KE+ A+  + ++  +   P 
Sbjct: 241 EMGENSVGLGFNKGRIEDGTEEIEDDDSERCLDASSAEKRKEREAKSIDDIDKFRYVPPT 300

Query: 301 NYEGTMYRDRWRCV-----LPSTM---NGSKNSEETDATLPS---------IIMEILKLL 332
           N       ++ +CV     LP +M   NG   SE     +PS          ++E+LK+L
Sbjct: 301 NANSL---EKQKCVGAKRALPMSMCVNNGCAESEVVPDGVPSPKSYEEVVFTLLEVLKML 360

[Close]

BLAST of CmaCh13G010180 vs. NCBI nr
Match: gi|731437389|ref|XP_010646741.1| (PREDICTED: uncharacterized protein LOC104878305 isoform X2 [Vitis vinifera])

HSP 1 Score: 90.1 bits (222), Expect = 8.1e-15
Identity = 112/380 (29.47%), Postives = 158/380 (41.58%), Query Frame = 1


Query: 7   DPFDSLTKLCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHQLLQPTGLFMASLPESL 66
           DPF SL + C +S SQED+LR C F        G  S  S     ++ +G+ M SLPES 
Sbjct: 3   DPFQSLLEPCHISSSQEDLLRNCPFTRQSHDGSGEDSPDSG-GVPVESSGIIMLSLPEST 62

Query: 67  ERREQITSHNAYQAPPEQ-----SGGQRPMAEDDPSLQDAAVVAGGAEAAVEGGC-VRDV 126
              E+ T  + +Q PPE+     S  QR  A D    Q    V    E +V       D 
Sbjct: 63  Y--EETTPQDEFQTPPEEVQPASSAEQRAPAFDR---QHEVWVDDDKEGSVAADVSCTDG 122

Query: 127 ATAVDLGKNDDLGFRLEVQSTQQIDEIEIIGVRRRKVSESDAGGER------ESASKRLN 186
           A  V+LGK+ DLGF     + + +    + GV   +VSES     R      + AS  LN
Sbjct: 123 AATVELGKDSDLGFSGPTSAVKVVAVSNVDGVGASEVSESGVEKCRVLLRGSQEASGNLN 182

Query: 187 FSNEALGTDSSVP--------------IVVEKLPVDLES-----GGGSKL------VDHN 246
            ++ + G  +++                +V+K P   ES     GG S L       D +
Sbjct: 183 INSVSPGNCNTISPQNNQGNEIMLIEDTLVKKKPCFPESEFEDTGGVSGLGEDPMKTDSD 242

Query: 247 VEMAEESATVAVESGKVDDGKVSNGE-------ETHCNKNKE-----KFAENRVENSQPD 306
           V++ +      VE+GK  +G VS G+            KN E     K+    V N  P 
Sbjct: 243 VDVTKREG---VENGK-SNGDVSEGDILQSIVGRDTIRKNIEDLEKFKYIIRSVRNGPPL 302

Query: 307 EPCNYEGTMYRDRWRCVLPSTMNGSKNSEETDATLPSIIMEILKLLAEEEGEEDKELASM 338
            P   E    R      +   +  +     T       ++++LK+L  E     +E    
Sbjct: 303 PPLLSEVPQARRELPLSICGPVEDAARDSVTGNRQQVTVVDVLKILCGECDWNPEETEET 362

The following BLAST results are available for this feature:

BLAST of CmaCh13G010180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh13G010180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT00_CUCSA	8.6e-88	57.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042410 PE=4 SV=1	[more]
A0A0A0L1F4_CUCSA	9.0e-21	32.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017190 PE=4 SV=1	[more]
B9SYZ7_RICCO	3.0e-16	28.35	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0120770 PE=4 SV=1	[more]
V4TJ52_9ROSI	5.0e-11	26.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020707mg PE=4 SV=1	[more]
W9RXT1_9ROSA	3.6e-09	31.50	Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1	[more]

BLAST of CmaCh13G010180 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh13G010180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209033\|gb\|KGN64129.1\|	1.2e-87	57.18	hypothetical protein Csa_1G042410 [Cucumis sativus]	[more]
gi\|659095815\|ref\|XP_008448781.1\|	8.1e-23	33.24	PREDICTED: uncharacterized protein LOC103490847 [Cucumis melo]	[more]
gi\|700200692\|gb\|KGN55825.1\|	1.3e-20	32.86	hypothetical protein Csa_3G017190 [Cucumis sativus]	[more]
gi\|223529176\|gb\|EEF31152.1\|	4.3e-16	28.35	conserved hypothetical protein [Ricinus communis]	[more]
gi\|731437389\|ref\|XP_010646741.1\|	8.1e-15	29.47	PREDICTED: uncharacterized protein LOC104878305 isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G010180.1	CmaCh13G010180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38221	FAMILY NOT NAMED	coord: 1..344 score: 2.3
None	No IPR available	PANTHER	PTHR38221:SF1	SUBFAMILY NOT NAMED	coord: 1..344 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G010180	Cucsa.121550	Cucumber (Gy14) v1	cgycmaB0317
CmaCh13G010180	Cla018496	Watermelon (97103) v1	cmawmB206
CmaCh13G010180	Csa1G042410	Cucumber (Chinese Long) v2	cmacuB217
CmaCh13G010180	MELO3C002095	Melon (DHL92) v3.5.1	cmameB193
CmaCh13G010180	ClCG04G011020	Watermelon (Charleston Gray)	cmawcgB202
CmaCh13G010180	CSPI01G06840	Wild cucumber (PI 183967)	cmacpiB218
CmaCh13G010180	CmoCh13G010590	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G010180	Lsi02G001880	Bottle gourd (USVL1VR-Ls)	cmalsiB208
CmaCh13G010180	Cp4.1LG20g01320	Cucurbita pepo (Zucchini)	cmacpeB234
CmaCh13G010180	MELO3C002095.2	Melon (DHL92) v3.6.1	cmamedB214
CmaCh13G010180	CsaV3_1G006700	Cucumber (Chinese Long) v3	cmacucB0248
CmaCh13G010180	Cla97C04G077910	Watermelon (97103) v2	cmawmbB233
CmaCh13G010180	Bhi08G001028	Wax gourd	cmawgoB0266
CmaCh13G010180	CsGy1G006570	Cucumber (Gy14) v2	cgybcmaB073
CmaCh13G010180	Carg04820	Silver-seed gourd	carcmaB0540

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G010180	Bottle gourd (USVL1VR-Ls)	cmalsiB218
CmaCh13G010180	Cucumber (Gy14) v2	cgybcmaB077
CmaCh13G010180	Cucumber (Gy14) v2	cgybcmaB595
CmaCh13G010180	Melon (DHL92) v3.6.1	cmamedB206
CmaCh13G010180	Melon (DHL92) v3.6.1	cmamedB227
CmaCh13G010180	Silver-seed gourd	carcmaB0721
CmaCh13G010180	Silver-seed gourd	carcmaB0832
CmaCh13G010180	Silver-seed gourd	carcmaB1094
CmaCh13G010180	Cucumber (Chinese Long) v3	cmacucB0252
CmaCh13G010180	Watermelon (97103) v2	cmawmbB240
CmaCh13G010180	Wax gourd	cmawgoB0239
CmaCh13G010180	Cucurbita maxima (Rimu)	cmacmaB093
CmaCh13G010180	Cucurbita maxima (Rimu)	cmacmaB127
CmaCh13G010180	Cucurbita maxima (Rimu)	cmacmaB217
CmaCh13G010180	Cucumber (Gy14) v1	cgycmaB0265
CmaCh13G010180	Cucurbita moschata (Rifu)	cmacmoB211
CmaCh13G010180	Cucurbita moschata (Rifu)	cmacmoB215
CmaCh13G010180	Cucurbita moschata (Rifu)	cmacmoB224
CmaCh13G010180	Wild cucumber (PI 183967)	cmacpiB223
CmaCh13G010180	Cucumber (Chinese Long) v2	cmacuB221
CmaCh13G010180	Melon (DHL92) v3.5.1	cmameB207
CmaCh13G010180	Watermelon (Charleston Gray)	cmawcgB208
CmaCh13G010180	Watermelon (97103) v1	cmawmB214
CmaCh13G010180	Cucurbita pepo (Zucchini)	cmacpeB213
CmaCh13G010180	Cucurbita pepo (Zucchini)	cmacpeB228
CmaCh13G010180	Cucurbita pepo (Zucchini)	cmacpeB246