Csa1G014520 (gene) Cucumber (Chinese Long) v2

NameCsa1G014520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 1954536 .. 1955454 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTACCATCGTCACCTTGGAGAAAATTGAGGTTTACACTAAAGACGTGTCGATCAAGATCGCTCCTCCATTTGACTTCATGGATATTATTCCCCTTGAAGCAGTTGGGCGGTATAAAGAATGTATCTTGTTGTTATGCAGTTGGATTTACAATTTTGGTGGTCTTGCTGTGATGAAGCAGGTTACCTAAATTTCAAGAGAACTACCTATTTTCTTTCCTCACAAACAACTGCTAACATTGTATCTTTCTGTCAGTAGGTGTAGAAATTTGTAGAAATTTACAAAGAAAAGCAACCACTCCACGATCTATCTTATTTCTTTATAGGCAAAAGTGAACAACTTGAATCCTCACTCTGTTTTATACCTTGCCTAATTCAATGCACATCCAACCTCCAACCAAACAAAGTCAAAGAGTTCTAAAACATGAAACAAAATTTTCAGAACCAACCTCAAGGTCATCTTTTTATCTTCTTCTATCAATAATTGTTCTTTAGTTGTAGCTACTTTTCCAAGAGATGATGCTGAAATAGAAAGGAAAATCCATTAAAGTAAAGAATTATTTGTGCCAGATGATTTGATTTCCATATAAAGTAATTAGTAACTTTTCAAAATTTTCATCTTTAGTTTTTCTTGTTCTCTATAGTTTCTTTTGAAGGGAAAACAAAACGAAAAAAATAAAAGATTATAAATTATTGTAGGAAAGTTTGTTCTGATTTTTTTGTCTGTAGCATAATTTTATAGATACTGGACCAGGTCCTTACCAAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGACTCAGCCATACCCTCCAATTGTACCTCCTCAAGGGGAAACTAAATCTGAAACTGTACCTCCGTCAATGAAAACTAAGTTTAGAGGTGATGGGTTTTGCAGAGGATTGTAA

mRNA sequence

ATGAGTTGTACCATCGTCACCTTGGAGAAAATTGAGGTTTACACTAAAGACGTGTCGATCAAGATCGCTCCTCCATTTGACTTCATGGATATTATTCCCCTTGAAGCAGTTGGGCGGTATAAAGAATGTATCTTGTTGTTATGCAGTTGGATTTACAATTTTGGTGGTCTTGCTGTGATGAAGCAGCATAATTTTATAGATACTGGACCAGGTCCTTACCAAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGACTCAGCCATACCCTCCAATTGTACCTCCTCAAGGGGAAACTAAATCTGAAACTGTACCTCCGTCAATGAAAACTAAGTTTAGAGGTGATGGGTTTTGCAGAGGATTGTAA

Coding sequence (CDS)

ATGAGTTGTACCATCGTCACCTTGGAGAAAATTGAGGTTTACACTAAAGACGTGTCGATCAAGATCGCTCCTCCATTTGACTTCATGGATATTATTCCCCTTGAAGCAGTTGGGCGGTATAAAGAATGTATCTTGTTGTTATGCAGTTGGATTTACAATTTTGGTGGTCTTGCTGTGATGAAGCAGCATAATTTTATAGATACTGGACCAGGTCCTTACCAAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGACTCAGCCATACCCTCCAATTGTACCTCCTCAAGGGGAAACTAAATCTGAAACTGTACCTCCGTCAATGAAAACTAAGTTTAGAGGTGATGGGTTTTGCAGAGGATTGTAA

Protein sequence

MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVMKQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFCRGL*
BLAST of Csa1G014520 vs. TrEMBL
Match: A0A0A0LPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014520 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 3.5e-68
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

Query: 1   MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM 60
           MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM
Sbjct: 1   MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM 60

Query: 61  KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC 120
           KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC
Sbjct: 61  KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC 120

Query: 121 RGL 124
           RGL
Sbjct: 121 RGL 123

BLAST of Csa1G014520 vs. NCBI nr
Match: gi|700208659|gb|KGN63755.1| (hypothetical protein Csa_1G014520 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 5.0e-68
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

Query: 1   MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM 60
           MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM
Sbjct: 1   MSCTIVTLEKIEVYTKDVSIKIAPPFDFMDIIPLEAVGRYKECILLLCSWIYNFGGLAVM 60

Query: 61  KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC 120
           KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC
Sbjct: 61  KQHNFIDTGPGPYQVAPPMCDPMQHGQTQPYPPIVPPQGETKSETVPPSMKTKFRGDGFC 120

Query: 121 RGL 124
           RGL
Sbjct: 121 RGL 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LPD8_CUCSA3.5e-68100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208659|gb|KGN63755.1|5.0e-68100.00hypothetical protein Csa_1G014520 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU160296cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G014520.1Csa1G014520.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160296CU160296transcribed_cluster


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G014520Cucumber (Chinese Long) v2cucuB000
Csa1G014520Cucumber (Chinese Long) v2cucuB003
Csa1G014520Cucumber (Gy14) v1cgycuB140
Csa1G014520Cucurbita maxima (Rimu)cmacuB051
Csa1G014520Cucurbita maxima (Rimu)cmacuB087
Csa1G014520Cucurbita maxima (Rimu)cmacuB215
Csa1G014520Cucurbita maxima (Rimu)cmacuB221
Csa1G014520Cucurbita maxima (Rimu)cmacuB393
Csa1G014520Cucurbita moschata (Rifu)cmocuB076
Csa1G014520Cucurbita moschata (Rifu)cmocuB040
Csa1G014520Cucurbita moschata (Rifu)cmocuB201
Csa1G014520Cucurbita moschata (Rifu)cmocuB385
Csa1G014520Melon (DHL92) v3.5.1cumeB023
Csa1G014520Melon (DHL92) v3.5.1cumeB044
Csa1G014520Watermelon (Charleston Gray)cuwcgB056
Csa1G014520Watermelon (Charleston Gray)cuwcgB058
Csa1G014520Watermelon (97103) v1cuwmB061
Csa1G014520Watermelon (97103) v1cuwmB063
Csa1G014520Watermelon (97103) v1cuwmB082
Csa1G014520Cucurbita pepo (Zucchini)cpecuB033
Csa1G014520Cucurbita pepo (Zucchini)cpecuB364
Csa1G014520Cucurbita pepo (Zucchini)cpecuB509
Csa1G014520Bottle gourd (USVL1VR-Ls)culsiB025
Csa1G014520Bottle gourd (USVL1VR-Ls)culsiB042
Csa1G014520Cucumber (Gy14) v2cgybcuB005
Csa1G014520Cucumber (Gy14) v2cgybcuB015
Csa1G014520Melon (DHL92) v3.6.1cumedB019
Csa1G014520Silver-seed gourdcarcuB0416
Csa1G014520Silver-seed gourdcarcuB0491
Csa1G014520Silver-seed gourdcarcuB0494
Csa1G014520Silver-seed gourdcarcuB0543
Csa1G014520Silver-seed gourdcarcuB0622
Csa1G014520Watermelon (97103) v2cuwmbB053
Csa1G014520Watermelon (97103) v2cuwmbB055
Csa1G014520Watermelon (97103) v2cuwmbB068
Csa1G014520Wax gourdcuwgoB043
Csa1G014520Wax gourdcuwgoB080