Csa1G013180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G013180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionChaperone protein ClpB
LocationChr1 : 1755287 .. 1755984 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTTCTAAAACTATGTATGCTTCCTCGATAAGAAATGCAAGAAACCCTAACCACTTCTCAACAATATAACTGCACCGAACAGAAAAGGGCAATATGGGTCTATTAGATGACTAATTTCACGATCTCAACAACAAGCTCCATCAAATCTGACAAAACAATAGAGTCGTTTTTCTTCCATACTATTTTCTATCCCATTCTATAAACAACAATAATAAAATGCTCAAAATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCATCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAGTGAGAAAGGATCGGAAGGAAATTACAGTGATAGTGCTTATAGTGTTTATAGACGAAATTCATATGTTGGTCCGACATGATCAAGGAACCGCCGCGGAGATTCTGAAACCGGCGCTGTGGAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGGAATACAAAAGGTATATTGGCGAGGAGATTTAA

mRNA sequence

ATGCTCAAAATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCATCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAGAACCGCCGCGGAGATTCTGAAACCGGCGCTGTGGAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGGAATACAAAAGGTATATTGGCGAGGAGATTTAA

Coding sequence (CDS)

ATGCTCAAAATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCATCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAGAACCGCCGCGGAGATTCTGAAACCGGCGCTGTGGAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGGAATACAAAAGGTATATTGGCGAGGAGATTTAA

Protein sequence

MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPDQALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEEI*
Homology
[Close]
BLAST of Csa1G013180 vs. Swiss-Prot
Match: CLPB4_ARATH (Chaperone protein ClpB4, mitochondrial OS=Arabidopsis thaliana GN=CLPB4 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 48/167 (28.74%), Postives = 68/167 (40.72%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRH-----LRRRKNS--------YRRSTRTENR 67
           ALE YG+DL E A +  +DP+  R  EIR       RR KN+          ++   E  
Sbjct: 241 ALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGL 300

Query: 68  LRK-----CPDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEECG--------- 127
            ++      P+  + RK      GS    +  R       +A+ +E+             
Sbjct: 301 AQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSASNGQTILFIDE 360

Query: 128 ----------DDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                     D    A+ +LKP L RG  RCIGATTL EY++YI ++
Sbjct: 361 IHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKD 407

[Close]
BLAST of Csa1G013180 vs. Swiss-Prot
Match: CLPC_CHLPN (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia pneumoniae GN=clpC PE=3 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 1 

Query: 7   SALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRSTRTEN 66
           SAL+ YG+DL E   +  +DP+  R  E+  L     RRRKN+          ++   E 
Sbjct: 185 SALKAYGYDLTEMVRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTAIVEG 244

Query: 67  R-----LRKCPDQALRRKNRRT--------GHGSPTRRSNLRRAIGREIEECG------D 126
                 L + PD ALR+K   T        G     +     +A+  E+ + G      D
Sbjct: 245 LAQKIILNEVPD-ALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFID 304

Query: 127 DGRT------------AAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
           +  T            A+ ILKPAL RG  +CIGATT+ EY+++I ++
Sbjct: 305 ELHTIVGAGAAEGAIDASNILKPALARGEIQCIGATTIDEYRKHIEKD 351

[Close]
BLAST of Csa1G013180 vs. Swiss-Prot
Match: CLPC_CHLTR (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=clpC PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 50/167 (29.94%), Postives = 74/167 (44.31%), Query Frame = 1 

Query: 7   SALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRSTRTEN 66
           SAL+ YG+DL E  ++  +DP+  R  E+  L     RRRKN+          ++   E 
Sbjct: 187 SALKAYGYDLTEMFKESRLDPVIGRSAEVERLILILCRRRKNNPVLVGEAGVGKTAIVEG 246

Query: 67  RLRKCPD----QALRRKNRRT--------GHGSPTRRSNLRRAIGREIEECG------DD 126
             +K       +ALR+K   T        G     +     +A+  E+ + G      D+
Sbjct: 247 LAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDE 306

Query: 127 GRT------------AAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
             T            A+ ILKPAL RG  +CIGATTL EY+++I ++
Sbjct: 307 LHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKD 353

[Close]
BLAST of Csa1G013180 vs. Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum (strain MoPn / Nigg) GN=clpC PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 50/167 (29.94%), Postives = 74/167 (44.31%), Query Frame = 1 

Query: 7   SALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRSTRTEN 66
           SAL+ YG+DL E  ++  +DP+  R  E+  L     RRRKN+          ++   E 
Sbjct: 204 SALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAGVGKTAIVEG 263

Query: 67  RLRKCPD----QALRRKNRRT--------GHGSPTRRSNLRRAIGREIEECG------DD 126
             +K       +ALR+K   T        G     +     +A+  E+ + G      D+
Sbjct: 264 LAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDE 323

Query: 127 GRT------------AAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
             T            A+ ILKPAL RG  +CIGATTL EY+++I ++
Sbjct: 324 LHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKD 370

[Close]
BLAST of Csa1G013180 vs. TrEMBL
Match: A0A0A0LRT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013180 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.4e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1 

Query: 1   MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD 60
           MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD
Sbjct: 1   MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD 60

Query: 61  QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL 120
           QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL
Sbjct: 61  QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL 120

Query: 121 KEYKRYIGEEI 132
           KEYKRYIGEEI
Sbjct: 121 KEYKRYIGEEI 131

[Close]
BLAST of Csa1G013180 vs. TrEMBL
Match: A0A089VI33_9STRA (Clp protease ATP binding subunit OS=Roundia cardiophora GN=clpC PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-06
Identity = 50/166 (30.12%), Postives = 69/166 (41.57%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS-------------YRRST 67
           AL+ Y  ++ + AEK  +DP+  R +EI  L     RRRKN+                  
Sbjct: 173 ALDEYTENITQEAEKGLLDPVIGRDEEIDSLIKVLGRRRKNNPVLLGEAGVGKTACAEGL 232

Query: 68  RTENRLRKCPD----QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRT------- 127
             E     CPD      +R  +  +       R      + R I+E    G+T       
Sbjct: 233 AQEMNSYDCPDFLTEHVVRSLDLGSVLAGTKYRGEFEERMKRIIDEVKRHGKTILVIDEI 292

Query: 128 --------------AAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                         AA +LKPAL RGN RCIGATTL EY++YI ++
Sbjct: 293 HTLVGAGAAEGAVDAANLLKPALARGNLRCIGATTLDEYRKYIEKD 338

[Close]
BLAST of Csa1G013180 vs. TrEMBL
Match: A0A142YIQ1_9PLAN (Chaperone protein ClpB OS=Planctomyces sp. SH-PL62 GN=clpB1 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06
Identity = 51/167 (30.54%), Postives = 71/167 (42.51%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRSTRTENR 67
           ALE YG DL E A K  +DP+  R  EIR +     RR KN+          ++   E  
Sbjct: 160 ALERYGRDLVEAARKGKMDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGL 219

Query: 68  LRKC-----PDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEEC---------- 127
            ++      PD    RK      G+    +  R       +A+ +E+ E           
Sbjct: 220 AQRIVSGDVPDSLQNRKLIALDMGALVAGAKYRGEFEERLKAVLKEVTESEGRIILFIDE 279

Query: 128 ---------GDDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                    GD    AA +LKPAL RG  RCIGATTL E++ +I ++
Sbjct: 280 LHLVVGAGKGDGAMDAANLLKPALARGELRCIGATTLDEFREHIEKD 326

[Close]
BLAST of Csa1G013180 vs. TrEMBL
Match: A0A0A0LPI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013170 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-06
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 94  DDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
           D   TAAEILKPAL RG FRCIGATTLKEYKRYI ++
Sbjct: 132 DHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKD 168

[Close]
BLAST of Csa1G013180 vs. TrEMBL
Match: A0A0A0LPI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013170 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-04
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 1 

Query: 4  MAESALETYGHDLAETAEKQTIDPIFRRRQEIRHL 39
          MA+SALETYGHDL E AEKQT+DPIF R +EI  L
Sbjct: 1  MAKSALETYGHDLVEKAEKQTLDPIFGRHKEICRL 35


HSP 2 Score: 58.9 bits (141), Expect = 5.3e-06
Identity = 48/173 (27.75%), Postives = 77/173 (44.51%), Query Frame = 1 

Query: 3   KMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRST 62
           +++  +L+ YG DL+E A    +DP+  R +EIR +     RR KN+          ++ 
Sbjct: 170 EVSYQSLKKYGRDLSEAAAANELDPVIGRDKEIRRVIQILSRRTKNNPIILGDPGVGKTA 229

Query: 63  RTENRLRK-----CPDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEE------ 122
             E   ++      PD    R+      G+    + LR       +++ +E++E      
Sbjct: 230 IAEGLAQRIVSGDVPDTLAGRQLISLDLGALVAGAKLRGEFEERLKSVIKEVQESSGQII 289

Query: 123 --------------CGDDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                          G+ G  A  ILKP L RG  RCIGATTL EY++YI ++
Sbjct: 290 LFIDEIHMVVGAGSAGESGMDAGNILKPMLARGELRCIGATTLDEYRKYIEKD 342

[Close]
BLAST of Csa1G013180 vs. TAIR10
Match: AT2G25140.1 (AT2G25140.1 casein lytic proteinase B4)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 48/167 (28.74%), Postives = 68/167 (40.72%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRH-----LRRRKNS--------YRRSTRTENR 67
           ALE YG+DL E A +  +DP+  R  EIR       RR KN+          ++   E  
Sbjct: 241 ALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGL 300

Query: 68  LRK-----CPDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEECG--------- 127
            ++      P+  + RK      GS    +  R       +A+ +E+             
Sbjct: 301 AQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSASNGQTILFIDE 360

Query: 128 ----------DDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                     D    A+ +LKP L RG  RCIGATTL EY++YI ++
Sbjct: 361 IHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKD 407

[Close]
BLAST of Csa1G013180 vs. NCBI nr
Match: gi|700208623|gb|KGN63719.1| (hypothetical protein Csa_1G013180 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 6.3e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1 

Query: 1   MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD 60
           MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD
Sbjct: 1   MLKMAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPD 60

Query: 61  QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL 120
           QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL
Sbjct: 61  QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRTAAEILKPALWRGNFRCIGATTL 120

Query: 121 KEYKRYIGEEI 132
           KEYKRYIGEEI
Sbjct: 121 KEYKRYIGEEI 131

[Close]
BLAST of Csa1G013180 vs. NCBI nr
Match: gi|659106140|ref|XP_008453261.1| (PREDICTED: chaperone protein ClpB1 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-07
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 88  EIEECGDDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
           EI     +G TAAEILKPAL RGNFRCIGATTLKEYKRYI ++
Sbjct: 124 EIHMFVQNGGTAAEILKPALGRGNFRCIGATTLKEYKRYIEKD 166

[Close]
BLAST of Csa1G013180 vs. NCBI nr
Match: gi|659106140|ref|XP_008453261.1| (PREDICTED: chaperone protein ClpB1 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-06
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 1 

Query: 4  MAESALETYGHDLAETAEKQTIDPIFRRRQEIRHL 39
          MA+SALETYGHDL E AEKQT+DPIF R QEIR L
Sbjct: 1  MAKSALETYGHDLVEKAEKQTLDPIFGRHQEIRRL 35


HSP 2 Score: 60.5 bits (145), Expect = 2.6e-06
Identity = 50/166 (30.12%), Postives = 69/166 (41.57%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS-------------YRRST 67
           AL+ Y  ++ + AEK  +DP+  R +EI  L     RRRKN+                  
Sbjct: 173 ALDEYTENITQEAEKGLLDPVIGRDEEIDSLIKVLGRRRKNNPVLLGEAGVGKTACAEGL 232

Query: 68  RTENRLRKCPD----QALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGRT------- 127
             E     CPD      +R  +  +       R      + R I+E    G+T       
Sbjct: 233 AQEMNSYDCPDFLTEHVVRSLDLGSVLAGTKYRGEFEERMKRIIDEVKRHGKTILVIDEI 292

Query: 128 --------------AAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                         AA +LKPAL RGN RCIGATTL EY++YI ++
Sbjct: 293 HTLVGAGAAEGAVDAANLLKPALARGNLRCIGATTLDEYRKYIEKD 338

[Close]
BLAST of Csa1G013180 vs. NCBI nr
Match: gi|1015457313|gb|AMV39095.1| (Chaperone protein ClpB 1 [Planctomyces sp. SH-PL62])

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-06
Identity = 51/167 (30.54%), Postives = 71/167 (42.51%), Query Frame = 1 

Query: 8   ALETYGHDLAETAEKQTIDPIFRRRQEIRHL-----RRRKNS--------YRRSTRTENR 67
           ALE YG DL E A K  +DP+  R  EIR +     RR KN+          ++   E  
Sbjct: 160 ALERYGRDLVEAARKGKMDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGL 219

Query: 68  LRKC-----PDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEEC---------- 127
            ++      PD    RK      G+    +  R       +A+ +E+ E           
Sbjct: 220 AQRIVSGDVPDSLQNRKLIALDMGALVAGAKYRGEFEERLKAVLKEVTESEGRIILFIDE 279

Query: 128 ---------GDDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
                    GD    AA +LKPAL RG  RCIGATTL E++ +I ++
Sbjct: 280 LHLVVGAGKGDGAMDAANLLKPALARGELRCIGATTLDEFREHIEKD 326

[Close]
BLAST of Csa1G013180 vs. NCBI nr
Match: gi|449441089|ref|XP_004138316.1| (PREDICTED: chaperone protein ClpB1 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-06
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 94  DDGRTAAEILKPALWRGNFRCIGATTLKEYKRYIGEE 131
           D   TAAEILKPAL RG FRCIGATTLKEYKRYI ++
Sbjct: 132 DHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKD 168

The following BLAST results are available for this feature:
BLAST of Csa1G013180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPB4_ARATH1.8e-0728.74Chaperone protein ClpB4, mitochondrial OS=Arabidopsis thaliana GN=CLPB4 PE=2 SV=... [more]
CLPC_CHLPN1.2e-0630.36Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia pneumoniae ... [more]
CLPC_CHLTR1.2e-0629.94Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis... [more]
CLPC_CHLMU1.5e-0629.94Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum (... [more]
BLAST of Csa1G013180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRT5_CUCSA4.4e-69100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013180 PE=4 SV=1[more]
A0A089VI33_9STRA1.8e-0630.12Clp protease ATP binding subunit OS=Roundia cardiophora GN=clpC PE=3 SV=1[more]
A0A142YIQ1_9PLAN3.1e-0630.54Chaperone protein ClpB OS=Planctomyces sp. SH-PL62 GN=clpB1 PE=3 SV=1[more]
A0A0A0LPI1_CUCSA3.1e-0678.38Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013170 PE=4 SV=1[more]
A0A0A0LPI1_CUCSA1.0e-0474.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013170 PE=4 SV=1[more]
BLAST of Csa1G013180 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G25140.11.0e-0828.74 casein lytic proteinase B4[more]
BLAST of Csa1G013180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208623|gb|KGN63719.1|6.3e-69100.00hypothetical protein Csa_1G013180 [Cucumis sativus][more]
gi|659106140|ref|XP_008453261.1|1.8e-0774.42PREDICTED: chaperone protein ClpB1 [Cucumis melo][more]
gi|659106140|ref|XP_008453261.1|5.8e-0680.00PREDICTED: chaperone protein ClpB1 [Cucumis melo][more]
gi|1015457313|gb|AMV39095.1|4.5e-0630.54Chaperone protein ClpB 1 [Planctomyces sp. SH-PL62][more]
gi|449441089|ref|XP_004138316.1|4.5e-0678.38PREDICTED: chaperone protein ClpB1 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019538 protein metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0000166 nucleotide binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU138461cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G013180.1Csa1G013180.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU138461CU138461transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G013180Bhi02G000531Wax gourdcuwgoB117
Csa1G013180CSPI01G02790Wild cucumber (PI 183967)cpicuB000
Csa1G013180CsGy1G002810Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G013180Cucumber (Chinese Long) v2cucuB000
Csa1G013180Cucumber (Chinese Long) v2cucuB029
Csa1G013180Watermelon (97103) v1cuwmB094
Csa1G013180Cucumber (Gy14) v1cgycuB138
Csa1G013180Cucumber (Gy14) v1cgycuB299
Csa1G013180Cucumber (Gy14) v1cgycuB404
Csa1G013180Cucurbita maxima (Rimu)cmacuB087
Csa1G013180Cucurbita maxima (Rimu)cmacuB221
Csa1G013180Cucurbita maxima (Rimu)cmacuB685
Csa1G013180Cucurbita moschata (Rifu)cmocuB076
Csa1G013180Cucurbita moschata (Rifu)cmocuB210
Csa1G013180Cucurbita moschata (Rifu)cmocuB673
Csa1G013180Melon (DHL92) v3.5.1cumeB009
Csa1G013180Melon (DHL92) v3.5.1cumeB030
Csa1G013180Melon (DHL92) v3.5.1cumeB054
Csa1G013180Watermelon (Charleston Gray)cuwcgB058
Csa1G013180Watermelon (Charleston Gray)cuwcgB062
Csa1G013180Watermelon (Charleston Gray)cuwcgB081
Csa1G013180Watermelon (97103) v1cuwmB037
Csa1G013180Watermelon (97103) v1cuwmB063
Csa1G013180Cucurbita pepo (Zucchini)cpecuB509
Csa1G013180Cucurbita pepo (Zucchini)cpecuB653
Csa1G013180Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G013180Bottle gourd (USVL1VR-Ls)culsiB025
Csa1G013180Bottle gourd (USVL1VR-Ls)culsiB056
Csa1G013180Cucumber (Gy14) v2cgybcuB005
Csa1G013180Melon (DHL92) v3.6.1cumedB004
Csa1G013180Melon (DHL92) v3.6.1cumedB026
Csa1G013180Melon (DHL92) v3.6.1cumedB046
Csa1G013180Silver-seed gourdcarcuB0416
Csa1G013180Silver-seed gourdcarcuB0622
Csa1G013180Watermelon (97103) v2cuwmbB055
Csa1G013180Watermelon (97103) v2cuwmbB060
Csa1G013180Watermelon (97103) v2cuwmbB078
Csa1G013180Wax gourdcuwgoB054
Csa1G013180Wax gourdcuwgoB070