CsGy1G002810 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G002810
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionChaperone protein ClpB 2
LocationChr1 : 1751992 .. 1752665 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCGTCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAGTGAGAAAGGATCGGAAGGAAATTAAAGTGATAGTGCTTATAGTGTTTATAGACGAAATTCATATGTTGGTCCGACATGATCAAGGAACCGCCGCGGAGATTCTGAAACCGGCGCTGGGAAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGAAATACAAAAGGTATATTGGCGAGGAGATTTAAACAAGTTTATGTGAATGAACCAAGTGTTGAAGATTCGATTAGCATTCTCAGAGTATTGAAGGAGAGATATGAAAAACATCATGTTCTTAAAATTAAATATACTGCTCTTGTTGCTGCTGCTAAATTGTCACCATCACTACATCACAGGTATAATTTAAAAAAACTTTACTATAAAAATCTACGTAAGAAAAATACAGCTTAG

mRNA sequence

ATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCGTCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAACGAAATTCATATGTTGGTCCGACATGATCAAGGAACCGCCGCGGAGATTCTGAAACCGGCGCTGGGAAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGAAATACAAAAGATTTAAACAAGTTTATGTGAATGAACCAAGTGTTGAAGATTCGATTAGCATTCTCAGAGTATTGAAGGAGAGATATGAAAAACATCATGTTCTTAAAATTAAATATACTGCTCTTGTTGCTGCTGCTAAATTGTCACCATCACTACATCACAGGTATAATTTAAAAAAACTTTACTATAAAAATCTACGTAAGAAAAATACAGCTTAG

Coding sequence (CDS)

ATGGCCGAATCCGCGCTTGAGACTTACGGCCACGATCTCGCCGAAACAGCAGAGAAACAAACTATCGATCCAATCTTCCGCCGCCGCCAAGAAATCCGCCGTCTCCGGCGACGGAAAAACAGCTATCGTCGAAGCACTCGCACAGAAAATCGCCTCCGGAAATGTCCTGACCAAGCTCTCCGGCGCAAGAATCGTAGAACTGGACATGGGAGCCCTACACGCCGGAGCAATTTACGTAGGGCAATTGGAAGAGAGATTGAAGAATGTGGTGACGACGGAAACGAAATTCATATGTTGGTCCGACATGATCAAGGAACCGCCGCGGAGATTCTGAAACCGGCGCTGGGAAGAGGGAATTTCCGGTGCATTGGAGCGACGACGTTGAAGAAATACAAAAGATTTAAACAAGTTTATGTGAATGAACCAAGTGTTGAAGATTCGATTAGCATTCTCAGAGTATTGAAGGAGAGATATGAAAAACATCATGTTCTTAAAATTAAATATACTGCTCTTGTTGCTGCTGCTAAATTGTCACCATCACTACATCACAGGTATAATTTAAAAAAACTTTACTATAAAAATCTACGTAAGAAAAATACAGCTTAG

Protein sequence

MAESALETYGHDLAETAEKQTIDPIFRRRQEIRRLRRRKNSYRRSTRTENRLRKCPDQALRRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGNEIHMLVRHDQGTAAEILKPALGRGNFRCIGATTLKKYKRFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRYNLKKLYYKNLRKKNTA
Homology
[Close]
BLAST of CsGy1G002810 vs. NCBI nr
Match: KGN63719.1 (hypothetical protein Csa_1G013180 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 2.2e-40
Identity = 94/134 (70.15%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MAESALETYGHDLAETAEKQTIDPIFRRR                         CPDQAL
Sbjct: 4   MAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPDQAL 63

Query: 61  RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGNEIHMLVRHDQGTAAEILKPALGRGNF 120
           RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDG            TAAEILKPAL RGNF
Sbjct: 64  RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGR-----------TAAEILKPALWRGNF 123

Query: 121 RCIGATTLKKYKRF 135
           RCIGATTLK+YKR+
Sbjct: 124 RCIGATTLKEYKRY 126

[Close]
BLAST of CsGy1G002810 vs. NCBI nr
Match: XP_004138316.1 (PREDICTED: chaperone protein ClpB1 [Cucumis sativus] >KGN63718.1 hypothetical protein Csa_1G013170 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 110/226 (48.67%), Postives = 121/226 (53.54%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MA+SALETYGHDL E AEKQT+DPIF R                              A+
Sbjct: 1   MAKSALETYGHDLVEKAEKQTLDPIFGRHKEICRLLTILCRKTKCNPILIGEPGVGKTAI 60

Query: 61  --RRKNRRTGHGSPTRRSNLR---------------------RAIGREIEECGDDG---- 120
                 +      P + S  R                     R      E  G +G    
Sbjct: 61  VEALAQKFAAGNVPAKLSGARIVELDMGAIMAGTIWRGQLEERLKDVMTEVKGSEGKVIV 120

Query: 121 --NEIHMLVRHD-QGTAAEILKPALGRGNFRCIGATTLKKYK-----------RFKQVYV 180
             +EIHMLVR D QGTAAEILKPALGRG FRCIGATTLK+YK           RFKQVYV
Sbjct: 121 FIDEIHMLVRSDHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKDGALARRFKQVYV 180

Query: 181 NEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           NEPSVEDSI+ILRVLKERYEKHHVL IK +AL+AAAKLS    HRY
Sbjct: 181 NEPSVEDSINILRVLKERYEKHHVLIIKDSALIAAAKLS----HRY 222

[Close]
BLAST of CsGy1G002810 vs. NCBI nr
Match: XP_008453261.1 (PREDICTED: chaperone protein ClpB1 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 6.7e-34
Identity = 108/225 (48.00%), Postives = 121/225 (53.78%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MA+SALETYGHDL E AEKQT+DPIF R                              A+
Sbjct: 1   MAKSALETYGHDLVEKAEKQTLDPIFGRHQEIRRLLTILCRKTKCNPILIGEPGVGKTAI 60

Query: 61  --RRKNRRTGHGSPTRRSNLR---------------------RAIGREIEECGDDG---- 120
                 +      P + S  R                     R      E  G +G    
Sbjct: 61  VEALAQKIAAGNVPAKLSGARIVELDMGAIIAGTIWRGQLEERLKDIMTEVKGSEGKVIV 120

Query: 121 --NEIHMLVRHDQGTAAEILKPALGRGNFRCIGATTLKKYK-----------RFKQVYVN 180
             +EIHM V++  GTAAEILKPALGRGNFRCIGATTLK+YK           RFKQVYVN
Sbjct: 121 FIDEIHMFVQNG-GTAAEILKPALGRGNFRCIGATTLKEYKRYIEKDGALARRFKQVYVN 180

Query: 181 EPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           EPSVEDSISILRVLKERYEKHH+LKIK +AL+AAAKLS    HRY
Sbjct: 181 EPSVEDSISILRVLKERYEKHHLLKIKDSALIAAAKLS----HRY 220

[Close]
BLAST of CsGy1G002810 vs. NCBI nr
Match: WP_095415709.1 (ATP-dependent chaperone ClpB [Thermogutta terrifontis] >ASV75736.1 ClpB protein [Thermogutta terrifontis])

HSP 1 Score: 100.5 bits (249), Expect = 6.8e-18
Identity = 64/125 (51.20%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 80  RAIGREIEECGDD----GNEIHMLV---RHDQGT-AAEILKPALGRGNFRCIGATTLKKY 139
           +A+ RE+E  G +     +E+H +V   R + G  AA +LKPAL RG+ RCIGATTL +Y
Sbjct: 262 KAVLREVEAAGGNIILFIDELHTVVGAGRAEGGADAANLLKPALARGDLRCIGATTLDEY 321

Query: 140 -----------KRFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPS 186
                      +RF+ VYV EPSVED+I+ILR LK RYE HH +KIK +ALVAAA+LS  
Sbjct: 322 RKYIEKDAALERRFQPVYVGEPSVEDTIAILRGLKARYEAHHGVKIKDSALVAAARLS-- 381

[Close]
BLAST of CsGy1G002810 vs. NCBI nr
Match: OFV81112.1 (ATP-dependent chaperone ClpB [Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 0 

Query: 80  RAIGREIEECGDDG------NEIHMLVRHDQG----TAAEILKPALGRGNFRCIGATTLK 139
           +A+ +EI E   DG      +E+H LV          A+ +LKPAL RG  RCIGATTL 
Sbjct: 262 KAVLKEIGEA--DGQIILFIDELHTLVGAGAAEGAIDASNMLKPALARGELRCIGATTLN 321

Query: 140 KYK-----------RFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 186
           +YK           RF+QVY+ EP++ED+ISILR LKERYE HH ++IK TALVAAA LS
Sbjct: 322 EYKKHVERDPALERRFQQVYIGEPTIEDTISILRGLKERYEVHHGVRIKDTALVAAATLS 381

[Close]
BLAST of CsGy1G002810 vs. TAIR10
Match: AT5G15450.1 (casein lytic proteinase B3)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-18
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 94  NEIHMLV----RHDQGTAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +EIH +V     +    A  +LKP LGRG  RCIGATTL +Y           +RF+QVY
Sbjct: 354 DEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVY 413

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V++P+VED+ISILR L+ERYE HH ++I  +ALV AA LS
Sbjct: 414 VDQPTVEDTISILRGLRERYELHHGVRISDSALVEAAILS 453

[Close]
BLAST of CsGy1G002810 vs. TAIR10
Match: AT1G74310.1 (heat shock protein 101)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 0 

Query: 94  NEIHMLV----RHDQGTAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +EIH+++          AA + KP L RG  RCIGATTL++Y           +RF+QVY
Sbjct: 279 DEIHLVLGAGKTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVY 338

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V EPSV D+ISILR LKE+YE HH ++I+  AL+ AA+LS
Sbjct: 339 VAEPSVPDTISILRGLKEKYEGHHGVRIQDRALINAAQLS 378

[Close]
BLAST of CsGy1G002810 vs. TAIR10
Match: AT4G14670.1 (casein lytic proteinase B2)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 94  NEIHMLVRHDQGT----AAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +EIHM +   + +    AA++LKP L RG  R IGATTL++Y           +RF+QV+
Sbjct: 244 DEIHMALGACKASGSTDAAKLLKPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVF 303

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V EPSV D+ISILR LKE+YE HH ++I+  ALV +A+LS
Sbjct: 304 VAEPSVPDTISILRGLKEKYEGHHGVRIQDRALVLSAQLS 343

[Close]
BLAST of CsGy1G002810 vs. TAIR10
Match: AT2G25140.1 (casein lytic proteinase B4)

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15
Identity = 69/218 (31.65%), Postives = 94/218 (43.12%), Query Frame = 0 

Query: 5   ALETYGHDLAETAEKQTIDPIFRR------------------RXXXXXXXXXXXXXXXXX 64
           ALE YG+DL E A +  +DP+  R                                    
Sbjct: 241 ALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGL 300

Query: 65  XXXXXXXXCPDQALRRKNRRTGHGSPTRRSNLR-------RAIGREIEECGDDG----NE 124
                    P+  + RK      GS    +  R       +A+ +E+           +E
Sbjct: 301 AQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSASNGQTILFIDE 360

Query: 125 IHMLV----RHDQGTAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVYVN 179
           IH +V          A+ +LKP LGRG  RCIGATTL +Y           +RF+QV   
Sbjct: 361 IHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKDPALERRFQQVLCV 420

[Close]
BLAST of CsGy1G002810 vs. TAIR10
Match: AT3G48870.1 (Clp ATPase)

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0 

Query: 94  NEIHMLVRHDQG----TAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +E+H L+          AA ILKPAL RG  +CIGATT+ +Y           +RF+ V 
Sbjct: 394 DEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVK 453

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           V EP+VE++I IL+ L+ERYE HH L+    ALVAAA+LS    H+Y
Sbjct: 454 VPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS----HQY 496

[Close]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match: sp|Q8DJ40|CLPB1_THEEB (Chaperone protein ClpB 1 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=clpB1 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 57/100 (57.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 94  NEIHMLV--RHDQGT--AAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +EIH +V     QG   A  +LKP L RG  RCIGATTL +Y           +RF+QVY
Sbjct: 279 DEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVY 338

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V++PSVED+ISILR LKERYE HH +KI  TALVAAA LS
Sbjct: 339 VDQPSVEDTISILRGLKERYEIHHGVKISDTALVAAATLS 378

[Close]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match: sp|Q8YM56|CLPB2_NOSS1 (Chaperone protein ClpB 2 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpB2 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-18
Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 0 

Query: 80  RAIGREIEECGDD----GNEIHMLV--RHDQGT--AAEILKPALGRGNFRCIGATTLKKY 139
           +A+ +E+ E G +     +EIH +V     QG   A  +LKP L RG  RCIGATTL +Y
Sbjct: 262 KAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEY 321

Query: 140 -----------KRFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
                      +RF+QVYV++PSVED+ISILR LKERYE HH +KI  ++LVAAA LS
Sbjct: 322 RKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVKISDSSLVAAATLS 379

[Close]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match: sp|P74459|CLPB1_SYNY3 (Chaperone protein ClpB 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpB1 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-18
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0 

Query: 94  NEIHMLV----RHDQGT--AAEILKPALGRGNFRCIGATTLKKY-----------KRFKQ 153
           +E+H +V    R   G+  A  +LKP L RG  RCIGATTL +Y           +RF+Q
Sbjct: 280 DEVHTVVGAGGREGSGSMDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQ 339

Query: 154 VYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           VYV +PSV+D+ISILR LKE+YE HH +KI  +ALVAAA LS    HRY
Sbjct: 340 VYVKQPSVDDTISILRGLKEKYEVHHGVKITDSALVAAATLS----HRY 384

[Close]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match: sp|Q8KA87|CLPB2_CHLTE (Probable chaperone protein ClpB 2 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=clpB2 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-18
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 94  NEIHMLV----RHDQGTAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +E+H+LV          AA ILKPAL RG  RCIGATTL +Y           +RF+ V 
Sbjct: 281 DELHLLVGAGSAEGSMDAANILKPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVI 340

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V++PSVED++SILR LKE+YE HH ++IK  ALVAAA+LS
Sbjct: 341 VDQPSVEDTVSILRGLKEKYEIHHGVRIKDAALVAAAELS 380

[Close]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match: sp|Q75GT3|CLPB2_ORYSJ (Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPB2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-18
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 94  NEIHMLV----RHDQGTAAEILKPALGRGNFRCIGATTLKKY-----------KRFKQVY 153
           +EIH +V     +    A  +LKP LGRG  RCIGATTL +Y           +RF+QVY
Sbjct: 361 DEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVY 420

Query: 154 VNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLS 179
           V++PSVED+ISILR L+ERYE HH ++I  +ALVAAA LS
Sbjct: 421 VDQPSVEDTISILRGLRERYELHHGVRISDSALVAAALLS 460

[Close]
BLAST of CsGy1G002810 vs. TrEMBL
Match: tr|A0A0A0LRT5|A0A0A0LRT5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013180 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 94/134 (70.15%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MAESALETYGHDLAETAEKQTIDPIFRRR                         CPDQAL
Sbjct: 4   MAESALETYGHDLAETAEKQTIDPIFRRRQEIRHLRRRKNSYRRSTRTENRLRKCPDQAL 63

Query: 61  RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGNEIHMLVRHDQGTAAEILKPALGRGNF 120
           RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDG            TAAEILKPAL RGNF
Sbjct: 64  RRKNRRTGHGSPTRRSNLRRAIGREIEECGDDGR-----------TAAEILKPALWRGNF 123

Query: 121 RCIGATTLKKYKRF 135
           RCIGATTLK+YKR+
Sbjct: 124 RCIGATTLKEYKRY 126

[Close]
BLAST of CsGy1G002810 vs. TrEMBL
Match: tr|A0A0A0LPI1|A0A0A0LPI1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013170 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 110/226 (48.67%), Postives = 121/226 (53.54%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MA+SALETYGHDL E AEKQT+DPIF R                              A+
Sbjct: 1   MAKSALETYGHDLVEKAEKQTLDPIFGRHKEICRLLTILCRKTKCNPILIGEPGVGKTAI 60

Query: 61  --RRKNRRTGHGSPTRRSNLR---------------------RAIGREIEECGDDG---- 120
                 +      P + S  R                     R      E  G +G    
Sbjct: 61  VEALAQKFAAGNVPAKLSGARIVELDMGAIMAGTIWRGQLEERLKDVMTEVKGSEGKVIV 120

Query: 121 --NEIHMLVRHD-QGTAAEILKPALGRGNFRCIGATTLKKYK-----------RFKQVYV 180
             +EIHMLVR D QGTAAEILKPALGRG FRCIGATTLK+YK           RFKQVYV
Sbjct: 121 FIDEIHMLVRSDHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKDGALARRFKQVYV 180

Query: 181 NEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           NEPSVEDSI+ILRVLKERYEKHHVL IK +AL+AAAKLS    HRY
Sbjct: 181 NEPSVEDSINILRVLKERYEKHHVLIIKDSALIAAAKLS----HRY 222

[Close]
BLAST of CsGy1G002810 vs. TrEMBL
Match: tr|A0A1S3BWY7|A0A1S3BWY7_CUCME (chaperone protein ClpB1 OS=Cucumis melo OX=3656 GN=LOC103494035 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.4e-34
Identity = 108/225 (48.00%), Postives = 121/225 (53.78%), Query Frame = 0 

Query: 1   MAESALETYGHDLAETAEKQTIDPIFRRRXXXXXXXXXXXXXXXXXXXXXXXXXCPDQAL 60
           MA+SALETYGHDL E AEKQT+DPIF R                              A+
Sbjct: 1   MAKSALETYGHDLVEKAEKQTLDPIFGRHQEIRRLLTILCRKTKCNPILIGEPGVGKTAI 60

Query: 61  --RRKNRRTGHGSPTRRSNLR---------------------RAIGREIEECGDDG---- 120
                 +      P + S  R                     R      E  G +G    
Sbjct: 61  VEALAQKIAAGNVPAKLSGARIVELDMGAIIAGTIWRGQLEERLKDIMTEVKGSEGKVIV 120

Query: 121 --NEIHMLVRHDQGTAAEILKPALGRGNFRCIGATTLKKYK-----------RFKQVYVN 180
             +EIHM V++  GTAAEILKPALGRGNFRCIGATTLK+YK           RFKQVYVN
Sbjct: 121 FIDEIHMFVQNG-GTAAEILKPALGRGNFRCIGATTLKEYKRYIEKDGALARRFKQVYVN 180

Query: 181 EPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPSLHHRY 186
           EPSVEDSISILRVLKERYEKHH+LKIK +AL+AAAKLS    HRY
Sbjct: 181 EPSVEDSISILRVLKERYEKHHLLKIKDSALIAAAKLS----HRY 220

[Close]
BLAST of CsGy1G002810 vs. TrEMBL
Match: tr|A0A2E7ELH3|A0A2E7ELH3_9PLAN (Chaperone protein ClpB OS=Planctomycetaceae bacterium OX=2026779 GN=clpB PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.0e-19
Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 80  RAIGREIEECGDDG----NEIHMLV---RHDQGT-AAEILKPALGRGNFRCIGATTLKKY 139
           +A+ RE+EE G       +E+H +V   R + G+ AA +LKPAL RG  RCIGATTL +Y
Sbjct: 261 KAVLREVEEAGGAVVLFIDELHTVVGAGRTEGGSDAANLLKPALARGELRCIGATTLDEY 320

Query: 140 -----------KRFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPS 186
                      +RF+ VYV EPSVEDSI+ILR LK RYE HH +KIK +ALVAAA+LS  
Sbjct: 321 RQYIEKDPALERRFQPVYVGEPSVEDSIAILRGLKPRYEAHHNVKIKDSALVAAAQLS-- 380

[Close]
BLAST of CsGy1G002810 vs. TrEMBL
Match: tr|A0A286RIG6|A0A286RIG6_9PLAN (Chaperone protein ClpB OS=Thermogutta terrifontis OX=1331910 GN=clpB PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.5e-18
Identity = 64/125 (51.20%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 80  RAIGREIEECGDD----GNEIHMLV---RHDQGT-AAEILKPALGRGNFRCIGATTLKKY 139
           +A+ RE+E  G +     +E+H +V   R + G  AA +LKPAL RG+ RCIGATTL +Y
Sbjct: 262 KAVLREVEAAGGNIILFIDELHTVVGAGRAEGGADAANLLKPALARGDLRCIGATTLDEY 321

Query: 140 -----------KRFKQVYVNEPSVEDSISILRVLKERYEKHHVLKIKYTALVAAAKLSPS 186
                      +RF+ VYV EPSVED+I+ILR LK RYE HH +KIK +ALVAAA+LS  
Sbjct: 322 RKYIEKDAALERRFQPVYVGEPSVEDTIAILRGLKARYEAHHGVKIKDSALVAAARLS-- 381

The following BLAST results are available for this feature:
BLAST of CsGy1G002810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63719.12.2e-4070.15hypothetical protein Csa_1G013180 [Cucumis sativus][more]
XP_004138316.11.8e-3448.67PREDICTED: chaperone protein ClpB1 [Cucumis sativus] >KGN63718.1 hypothetical pr... [more]
XP_008453261.16.7e-3448.00PREDICTED: chaperone protein ClpB1 [Cucumis melo][more]
WP_095415709.16.8e-1851.20ATP-dependent chaperone ClpB [Thermogutta terrifontis] >ASV75736.1 ClpB protein ... [more]
OFV81112.12.0e-1750.39ATP-dependent chaperone ClpB [Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57... [more]
BLAST of CsGy1G002810 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15450.14.8e-1851.00casein lytic proteinase B3[more]
AT1G74310.12.4e-1749.00heat shock protein 101[more]
AT4G14670.12.6e-1649.00casein lytic proteinase B2[more]
AT2G25140.11.3e-1531.65casein lytic proteinase B4[more]
AT3G48870.12.9e-1545.79Clp ATPase[more]
BLAST of CsGy1G002810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8DJ40|CLPB1_THEEB2.1e-1857.00Chaperone protein ClpB 1 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722... [more]
sp|Q8YM56|CLPB2_NOSS13.5e-1850.00Chaperone protein ClpB 2 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)... [more]
sp|P74459|CLPB1_SYNY37.9e-1851.38Chaperone protein ClpB 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111... [more]
sp|Q8KA87|CLPB2_CHLTE7.9e-1853.00Probable chaperone protein ClpB 2 OS=Chlorobaculum tepidum (strain ATCC 49652 / ... [more]
sp|Q75GT3|CLPB2_ORYSJ7.9e-1853.00Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of CsGy1G002810 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRT5|A0A0A0LRT5_CUCSA1.4e-4070.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013180 PE=4 SV=1[more]
tr|A0A0A0LPI1|A0A0A0LPI1_CUCSA1.2e-3448.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013170 PE=4 SV=1[more]
tr|A0A1S3BWY7|A0A1S3BWY7_CUCME4.4e-3448.00chaperone protein ClpB1 OS=Cucumis melo OX=3656 GN=LOC103494035 PE=4 SV=1[more]
tr|A0A2E7ELH3|A0A2E7ELH3_9PLAN9.0e-1952.80Chaperone protein ClpB OS=Planctomycetaceae bacterium OX=2026779 GN=clpB PE=3 SV... [more]
tr|A0A286RIG6|A0A286RIG6_9PLAN4.5e-1851.20Chaperone protein ClpB OS=Thermogutta terrifontis OX=1331910 GN=clpB PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019538 protein metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G002810.1CsGy1G002810.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 149..186
e-value: 5.2E-9
score: 38.4
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 94..148
e-value: 6.2E-11
score: 43.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..77
NoneNo IPR availablePANTHERPTHR11638:SF18HEAT SHOCK PROTEIN 78, MITOCHONDRIALcoord: 95..178
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 95..178
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 95..183

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G002810Csa1G013180Cucumber (Chinese Long) v2cgybcuB001
CsGy1G002810CSPI01G02790Wild cucumber (PI 183967)cgybcpiB001
CsGy1G002810Bhi02G000531Wax gourdcgybwgoB111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G002810Watermelon (97103) v2cgybwmbB054
CsGy1G002810Watermelon (97103) v2cgybwmbB058
CsGy1G002810Wax gourdcgybwgoB050
CsGy1G002810Wax gourdcgybwgoB067
CsGy1G002810Melon (DHL92) v3.6.1cgybmedB043
CsGy1G002810Cucumber (Gy14) v2cgybcgybB002
CsGy1G002810Cucurbita maxima (Rimu)cgybcmaB029
CsGy1G002810Cucurbita maxima (Rimu)cgybcmaB077
CsGy1G002810Cucurbita maxima (Rimu)cgybcmaB103
CsGy1G002810Cucurbita maxima (Rimu)cgybcmaB130
CsGy1G002810Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G002810Cucurbita moschata (Rifu)cgybcmoB075
CsGy1G002810Cucurbita moschata (Rifu)cgybcmoB119
CsGy1G002810Cucurbita pepo (Zucchini)cgybcpeB014
CsGy1G002810Cucurbita pepo (Zucchini)cgybcpeB061
CsGy1G002810Cucurbita pepo (Zucchini)cgybcpeB073
CsGy1G002810Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G002810Cucumber (Chinese Long) v2cgybcuB004
CsGy1G002810Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G002810Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G002810Melon (DHL92) v3.5.1cgybmeB024
CsGy1G002810Melon (DHL92) v3.5.1cgybmeB048
CsGy1G002810Melon (DHL92) v3.6.1cgybmedB005
CsGy1G002810Melon (DHL92) v3.6.1cgybmedB024
CsGy1G002810Watermelon (Charleston Gray)cgybwcgB054
CsGy1G002810Watermelon (Charleston Gray)cgybwcgB078
CsGy1G002810Watermelon (97103) v1cgybwmB065
CsGy1G002810Watermelon (97103) v1cgybwmB094
CsGy1G002810Wild cucumber (PI 183967)cgybcpiB003
CsGy1G002810Silver-seed gourdcarcgybB0394
CsGy1G002810Silver-seed gourdcarcgybB0594
CsGy1G002810Cucumber (Chinese Long) v3cgybcucB002
CsGy1G002810Cucumber (Chinese Long) v3cgybcucB004
CsGy1G002810Cucumber (Chinese Long) v3cgybcucB039
CsGy1G002810Watermelon (97103) v2cgybwmbB076