Csa1G004340 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCCGTTTGAGGTTACCAATATCAATAGTCACCACAGCGAACAAGGAGGCGGCTTTTTCCGTTTCTCAAACCCACTCTCTAAAATCCTCGATTTCTTCTACTTTCCCTTCATTTCCACAGGATTTTCTTTGATGGGTATTGATGAAATGTACTTCAAATTCATTTGAGCTTGAATTGGAGTTTATCAAAATGGATTAGTAGAGTCGATACTGGAGTTGTGTGTTGATTTTTTTTCTCTTTATTGGACATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGGTGCTTATTAGTCTTATTCGCTTTTCTCATATGTTAATGCTTTTTTTTCTTTATGGAAATTAATGTGTTCTATAATTTGATGTTTCAACATTGGTGATGTGGATAAGATTCTTGCTTCTTCTTTTTTTCTTTCTTTCTCTCGTTGGTGTGGGGTGTGAAAACTTGTTTTTTTTTTTCTTTCGACCAAGTGCGAATATTTGTTGGTGCTTTGGGTTGAAATAATTCGAATCAACAACAAGACAGTCTTTGGATTTGGGAACAGACGGTCTCTGCTGTTATTGAATTTATTACGTATTGGGAGTGTTTACAATGATTTTCACCCTGATATCTGAGAGCTTTGCTATCTGTAGCCTTTTGTTTTGATGTTTACTGAGTAATAAGATGGTTATGGTCTGATAATCTTTTGATATTGAAATTGTTATTGTCTCATTGTGCTATATGATCTATAAATGTTCATTGTGTTCTTAACGATATCATTTGATTTAATGGACTCTGTGTTTTTATTTTCATTTCCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGGTAGGATTTCTTATACTATCTTTTATTCGTTGATTCATGTTATATCATGCAATTTAATATCTATCTGCTTTGAACCTCAGATAATTTGTTTATATTCAAAATGGCTATAGAATGGATCGTCTGGTTTCTATTTTCTAGATTTCTCATAGCCACCATATCTATTATTAATTATCTTTCACTGTCATTTACCTGGTGAGATGCCTATTTTGACATTTCCCAAGATGTTTATCTCATTTAAATCCAATGGCAATGTTTTTGTTTTTGATTACTAAATGTTATGTTCTTGGTTCACTTTTGGAATTGTGCATAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGGTCAGTACAGTTTCTTACTTATTTATCTCTTAACCTCGTTAATATTTCATATATACTAAGTAATCTTTACTGTGTGTCAACCTGTCCCTTATCAACAAGGGTGATTGATGGCATAAGGGAGCTCTTAGATCGGAAATAGTTCCTTATAAGTTTCATGTTCTGTTTGTAATTTAGAATTCAGAAACGTATATGTCTTATTCTCATTGAGTCAAAGCAATGTTACATATTTATATAGAGAATAAACTAAACCCTAGAGACTAAGTAAAATTACAATAAAGGACATATGTATATATATATATATATCATAACACTGTTAAATATGAAATTTGTTCTCATGTTAAATATTTACTTTGGAGACTTAGATTCTGCTGGAAACTTTTAGTTCCTGTTCAAAATTCTCTATTGTAAACTTCGAATTATTTTCTCATTGCAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTAAGAATATTCATCTATGATCATTCTCCCTCCACATCTTTTGTTGTCTTGCCCATCCATGCTGGACTTGCTTCATTTAGTTATTCTATGGAGAAAAAGTCATATATTAGTCTATCATTCCCCTCGACTACATTTACATGCCCTTAATAATATTTTATTCAATCATCGATGTCGTGGCGTTTAATTTAAAGAGTTCCTATTGAACAGGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAAATAAGTTCCAAAGGGCAAAGTGCAGTGAACTTAATAAATTGTTGACCTGATTTTTTGTGTTCATTCCTGCTACATTGCAGTCGAATAGAGCGTTTCCAGAACATATTGCTCTATAAAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGGTGATGTTATGATAAAGGGAGAATGAAGTATTGAAGAAGATGGTGATCGTTCCTGTATCTTTTTGTACTTTCTTTTCCTTTGAATGAATATCCTAGCAGAGAGAAGTCAACTTTTAGTACCCTCTTCTTCTTTCAAGCTGCTGTTGGAACAATCTACATGACTTCATTTTTCTGAAACTGTTTTAGGAAATTTTTGGAACTGAGGATGGAATATGAGCTCTTATTGCTGAGTTCCATGAATAGCAACTGTATGTGAATCACCTTCAGGCATCTAACAGTTTGAAGCTGCCTCTGTTACATGTAAATGACCCATGTTAACTTTTCATGGCCAACTATGATTTGTTTACATGCTCCATGATCTTTTGAGAAGGTAAGGTATGTTGAAAGTAGACCACTTATATTTTTAACCTATAAATGAATCTGTAGAGAAATTTATGTGTCAGTGTTTAGAGCCACTTTTGAATTAGTTCTGGCAGTGATTCC ATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAA ATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAAATCATGTTCATGGCCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAA MSVKFASISCSVPTLSSPSDGRRSFQLSFSRGLYGIGSQQRSFQNLTFAEVESIKLMYGLLRSWSRFPRRKNVLSAISENQSQWCEQVELERVNEHPTDEDISLENNSFLHYEGTGGKPGFISFYNHSKEGKRIPLSSVQSNQYKFLWFVGPAVLVASFIFPSLYLRKLLSNIFEDSLLTDFLILFFTEALFYCGVAVFLFLIDRSRRTAEPDTLKNSYQTLSNQFGQRISSVATLALSLIIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARCKKSCSWPVIQIVFQVYRLHQLNRAAQLVTALSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIWSLSSFLMRFFPSNAATVQ*
BLAST of Csa1G004340 vs. TrEMBL
Match: A0A0A0LS19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 728.0 bits (1878), Expect = 5.7e-207 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 1
BLAST of Csa1G004340 vs. TrEMBL
Match: M5WMH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007436mg PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119 Identity = 233/370 (62.97%), Postives = 278/370 (75.14%), Query Frame = 1
BLAST of Csa1G004340 vs. TrEMBL
Match: W9RID3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014580 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 3.8e-118 Identity = 234/365 (64.11%), Postives = 273/365 (74.79%), Query Frame = 1
BLAST of Csa1G004340 vs. TrEMBL
Match: B9I3H4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09060g PE=4 SV=2) HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116 Identity = 237/372 (63.71%), Postives = 277/372 (74.46%), Query Frame = 1
BLAST of Csa1G004340 vs. TrEMBL
Match: V4TT63_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020708mg PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-115 Identity = 230/371 (61.99%), Postives = 278/371 (74.93%), Query Frame = 1
BLAST of Csa1G004340 vs. TAIR10
Match: AT5G63040.1 (AT5G63040.1 unknown protein) HSP 1 Score: 332.4 bits (851), Expect = 3.5e-91 Identity = 198/365 (54.25%), Postives = 239/365 (65.48%), Query Frame = 1
BLAST of Csa1G004340 vs. TAIR10
Match: AT1G48460.1 (AT1G48460.1 unknown protein) HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35 Identity = 80/249 (32.13%), Postives = 126/249 (50.60%), Query Frame = 1
BLAST of Csa1G004340 vs. NCBI nr
Match: gi|778655605|ref|XP_011656390.1| (PREDICTED: uncharacterized protein LOC105435726 [Cucumis sativus]) HSP 1 Score: 728.0 bits (1878), Expect = 8.1e-207 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 1
BLAST of Csa1G004340 vs. NCBI nr
Match: gi|659129154|ref|XP_008464550.1| (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 688.3 bits (1775), Expect = 7.1e-195 Identity = 352/366 (96.17%), Postives = 355/366 (96.99%), Query Frame = 1
BLAST of Csa1G004340 vs. NCBI nr
Match: gi|470125961|ref|XP_004298964.1| (PREDICTED: uncharacterized protein LOC101308083 [Fragaria vesca subsp. vesca]) HSP 1 Score: 439.5 bits (1129), Expect = 5.8e-120 Identity = 237/368 (64.40%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Csa1G004340 vs. NCBI nr
Match: gi|658032556|ref|XP_008351788.1| (PREDICTED: uncharacterized protein LOC103415229 [Malus domestica]) HSP 1 Score: 439.5 bits (1129), Expect = 5.8e-120 Identity = 236/361 (65.37%), Postives = 276/361 (76.45%), Query Frame = 1
BLAST of Csa1G004340 vs. NCBI nr
Match: gi|1009180919|ref|XP_015871886.1| (PREDICTED: uncharacterized protein LOC107408965, partial [Ziziphus jujuba]) HSP 1 Score: 437.6 bits (1124), Expect = 2.2e-119 Identity = 224/343 (65.31%), Postives = 274/343 (79.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |