CsGy1G001340 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATTTATCCGAACAACAAAGGGAAGAGAATCAATGAGTCATTTGGACTTTGGAGGATAGGCGACTTGAGATGGAAATAAGACGCTCGAAAATACATATTATTCTTTTCCCTCACCCGCCGTTTGAGGTTACCAATATCAATAGTCACCACAGCGAACAAGGAGGCGGCTTTTTCCGTTTCTCAAACCCACTCTCTAAAATCCTCGATTTCTTCTACTTTCCCTTCATTTCCACAGGATTTTCTTTGATGGGTATTGATGAAATGTACTTCAAATTCATTTGAGCTTGAATTGGAGTTTATCAAAATGGATTAGTAGAGTCGATACTGGAGTTGTGTGTTGATTTTTTTTCTCTTTATTGGACATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGGTGCTTATTAGTCTTATTCGCTTTTCTCATATGTTAATGCTTTTTTTTCTTTATGGAAATTAATGTGTTCTATAATTTGATGTTTCAACATTGGTGATGTGGATAAGATTCTTGCTTCTTCTTTTTTTCTTTCTTTCTCTCGTTGGTGTGGGGTGTGAAAACTTGTTTTTTTTTTTCTTTCGACCAAGTGCGAATATTTGTTGGTGCTTTGGGTTGAAATAATTCGAATCAACAACAAGACAGTCTTTGGATTTGGGAACAGACGGTCTCTGCTGTTATTGAATTTATTACGTATTGGGAGTGTTTACAATGATTTTCACCCTGATATCTGAGAGCTTTGCTATCTGTAGCCTTTTGTTTTGATGTTTACTGAGTAATAAGATGGTTATGGTCTGATAATCTTTTGATATTGAAATTGTTATTGTCTCATTGTGCTATATGATCTATAAATGTTCATTGTGTTCTTAACGATATCATTTGATTTAATGGACTCTGTGTTTTTATTTTCATTTCCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGGTAGGATTTCTTATACTATCTTTTATTCGTTGATTCATGTTATATCATGCAATTTAATATCTATCTGCTTTGAACCTCAGATAATTTGTTTATATTCAAAATGGCTATAGAATGGATCGTCTGGTTTCTATTTTCTAGATTTCTCATAGCCACCATATCTATTATTAATTATCTTTCACTGTCATTTACCTGGTGAGATGCCTATTTTGACATTTCCCAAGATGTTTATCTCATTTAAATCCAATGGCAATGTTTTTGTTTTTGATTACTAAATGTTATGTTCTTGGTTCACTTTTGGAATTGTGCATAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGGTCAGTACAGTTTCTTACTTATTTATCTCTTAACCTCGTTAATATTTCATATATACTAAGTAATCTTTACTGTGTGTCAACCTGTCCCTTATCAACAAGGGTGATTGATGGCATAAGGGAGCTCTTAGATCGGAAATAGTTCCTTATAAGTTTCATGTTCTGTTAAATATGAAATTTGTTCTCATGTTAAATATTTACTTTGGAGACTTAGATTCTGCTGGAAACTTTTAGTTCCTGTTCAAAATTCTCTATTGTAAACTTCGAATTATTTTCTCATTGCAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTAAGAATATTCATCTATGATCATTCTCCCTCCACATCTTTTGTTGTCTTGCCCATCCATGCTGGACTTGCTTCATTTAGTTATTCTATGGAGAAAAAGTCATATATTAGTCTATCATTCCCCTCGACTACATTTACATGCCCTTAATAATATTTTATTCAATCATCGATGTCGTGGCGTTTAATTTAAAGAGTTCCTATTGAACAGGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAAATAAGTTCCAAAGGGCAAAGTGCAGTGAACTTAATAAATTGTTGACCTGATTTTTTGTGTTCATTCCTGCTACATTGCAGTCGAATAGAGCGTTTCCAGAACATATTGCTCTATAAAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGGTGATGTTATGATAAAGGGAGAATGAAGTATTGAAGAAGATGGTGATCGTTCCTGTATCTTTTTGTACTTTCTTTTCCTTTGAATGAATATCCTAGCAGAGAGAAGTCAACTTTTAGTACCCTCTTCTTCTTTCAAGCTGCTGTTGGAACAATCTACATGACTTCATTTTTCTGAAACTGTTTTAGGAAATTTTTGGAACTGAGGATGGAATATGAGCTCTTATTGCTGAGTTCCATGAATAGCAACTGTATGTGAATCACCTTCAGGCATCTAACAGTTTGAAGCTGCCTCTGTTACATGTAAATGACCCATGTTAACTTTTCATGGCCAACTATGATTTGTTTACATGCTCCATGATCTTTTGAGAAGGTAAGGTATGTTGAAAGTAGACCACTTATATTTTTAACCTATAAATGAATCTGTAGAGAAATTTATGTGTCAGTGTTTAGAGCCACTTTTGAATTAGTTCTGGCAGTGATTCCCTCATTTGTGATCTTTTGGTATTATATTTTTTGTTATAGATTCGTGAAATATTTTATTTAATGTGAACGATGTAAAGAAGATATGCCTAAGATGGGTGAATCCTGCCATGCATGTGAGTACTATTCTTCTCCATTTTGGTCTCGATTTTGGTCTCCATTTTATCAACTTCATCTTCCTTCAATGACAATTTTTGTTGTGTATCTGCTAAATGAGTTTAATTATGTGGTATTAACTTGATCTTAGAGGTCGGGAATCCAATAAA GGAATTTATCCGAACAACAAAGGGAAGAGAATCAATGAGTCATTTGGACTTTGGAGGATAGGCGACTTGAGATGGAAATAAGACGCTCGAAAATACATATTATTCTTTTCCCTCACCCGCCGTTTGAGGTTACCAATATCAATAGTCACCACAGCGAACAAGGAGGCGGCTTTTTCCGTTTCTCAAACCCACTCTCTAAAATCCTCGATTTCTTCTACTTTCCCTTCATTTCCACAGGATTTTCTTTGATGGGTATTGATGAAATGTACTTCAAATTCATTTGAGCTTGAATTGGAGTTTATCAAAATGGATTAGTAGAGTCGATACTGGAGTTGTGTGTTGATTTTTTTTCTCTTTATTGGACATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAAATAAGTTCCAAAGGGCAAAGTGCAGTGAACTTAATAAATTGTTGACCTGATTTTTTGTGTTCATTCCTGCTACATTGCAGTCGAATAGAGCGTTTCCAGAACATATTGCTCTATAAAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGGTGATGTTATGATAAAGGGAGAATGAAGTATTGAAGAAGATGGTGATCGTTCCTGTATCTTTTTGTACTTTCTTTTCCTTTGAATGAATATCCTAGCAGAGAGAAGTCAACTTTTAGTACCCTCTTCTTCTTTCAAGCTGCTGTTGGAACAATCTACATGACTTCATTTTTCTGAAACTGTTTTAGGAAATTTTTGGAACTGAGGATGGAATATGAGCTCTTATTGCTGAGTTCCATGAATAGCAACTGTATGTGAATCACCTTCAGGCATCTAACAGTTTGAAGCTGCCTCTGTTACATGTAAATGACCCATGTTAACTTTTCATGGCCAACTATGATTTGTTTACATGCTCCATGATCTTTTGAGAAGGTAAGGTATGTTGAAAGTAGACCACTTATATTTTTAACCTATAAATGAATCTGTAGAGAAATTTATGTGTCAGTGTTTAGAGCCACTTTTGAATTAGTTCTGGCAGTGATTCCCTCATTTGTGATCTTTTGGTATTATATTTTTTGTTATAGATTCGTGAAATATTTTATTTAATGTGAACGATGTAAAGAAGATATGCCTAAGATGGGTGAATCCTGCCATGCATGTGAGTACTATTCTTCTCCATTTTGGTCTCGATTTTGTTGTGTATCTGCTAAATGAGTTTAATTATGTGGTATTAACTTGATCTTAGAGGTCGGGAATCCAATAAA ATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAA MSVKFASISCSVPTLSSPSDGRRSFQLSFSRGLYGIGSQQRSFQNLTFAEVESIKLMYGLLRSWSRFPRRKNVLSAISENQSQWCEQVELERVNEHPTDEDISLENNSFLHYEGTGGKPGFISFYNHSKEGKRIPLSSVQSNQYKFLWFVGPAVLVASFIFPSLYLRKLLSNIFEDSLLTDFLILFFTEALFYCGVAVFLFLIDRSRRTAEPDTLKNSYQTLSNQFGQRISSVATLALSLIIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARRKKSCSWPVIPIVFQVYRLHQLNRAAQLVTALSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIWSLSSFLMRFFPSNAATVQ
BLAST of CsGy1G001340 vs. NCBI nr
Match: XP_011656390.1 (PREDICTED: uncharacterized protein LOC105435726 [Cucumis sativus] >KGN63567.1 hypothetical protein Csa_1G004340 [Cucumis sativus]) HSP 1 Score: 709.5 bits (1830), Expect = 5.8e-201 Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 0
BLAST of CsGy1G001340 vs. NCBI nr
Match: XP_008464550.1 (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 682.9 bits (1761), Expect = 5.8e-193 Identity = 354/366 (96.72%), Postives = 357/366 (97.54%), Query Frame = 0
BLAST of CsGy1G001340 vs. NCBI nr
Match: XP_022922069.1 (uncharacterized protein LOC111430132 [Cucurbita moschata]) HSP 1 Score: 614.4 bits (1583), Expect = 2.5e-172 Identity = 324/367 (88.28%), Postives = 341/367 (92.92%), Query Frame = 0
BLAST of CsGy1G001340 vs. NCBI nr
Match: XP_023516945.1 (uncharacterized protein LOC111780702 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 613.2 bits (1580), Expect = 5.6e-172 Identity = 323/367 (88.01%), Postives = 341/367 (92.92%), Query Frame = 0
BLAST of CsGy1G001340 vs. NCBI nr
Match: XP_022988388.1 (uncharacterized protein LOC111485645 [Cucurbita maxima]) HSP 1 Score: 612.5 bits (1578), Expect = 9.6e-172 Identity = 324/367 (88.28%), Postives = 339/367 (92.37%), Query Frame = 0
BLAST of CsGy1G001340 vs. TAIR10
Match: AT5G63040.1 (unknown protein) HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74 Identity = 181/365 (49.59%), Postives = 221/365 (60.55%), Query Frame = 0
BLAST of CsGy1G001340 vs. TAIR10
Match: AT1G48460.1 (unknown protein) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34 Identity = 82/249 (32.93%), Postives = 130/249 (52.21%), Query Frame = 0
BLAST of CsGy1G001340 vs. TAIR10
Match: AT3G60590.3 (unknown protein) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10 Identity = 58/203 (28.57%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of CsGy1G001340 vs. TrEMBL
Match: tr|A0A0A0LS19|A0A0A0LS19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 709.5 bits (1830), Expect = 3.8e-201 Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 0
BLAST of CsGy1G001340 vs. TrEMBL
Match: tr|A0A1S3CLW8|A0A1S3CLW8_CUCME (uncharacterized protein LOC103502400 OS=Cucumis melo OX=3656 GN=LOC103502400 PE=4 SV=1) HSP 1 Score: 682.9 bits (1761), Expect = 3.8e-193 Identity = 354/366 (96.72%), Postives = 357/366 (97.54%), Query Frame = 0
BLAST of CsGy1G001340 vs. TrEMBL
Match: tr|A0A2N9J0P6|A0A2N9J0P6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58047 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.5e-120 Identity = 244/370 (65.95%), Postives = 284/370 (76.76%), Query Frame = 0
BLAST of CsGy1G001340 vs. TrEMBL
Match: tr|A0A2I4HVW8|A0A2I4HVW8_9ROSI (uncharacterized protein LOC109021991 OS=Juglans regia OX=51240 GN=LOC109021991 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 2.4e-118 Identity = 243/372 (65.32%), Postives = 294/372 (79.03%), Query Frame = 0
BLAST of CsGy1G001340 vs. TrEMBL
Match: tr|M5WMH4|M5WMH4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G170600 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116 Identity = 234/370 (63.24%), Postives = 279/370 (75.41%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |