Cucsa.196760 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGGATAGGCGACTTGAGATGGAAATAAGACGCTCGAAAATACATATTATTCTTTTCCCTCACCCGCCGTTTGAGGTTACCAATATCAATAGTCACCACAGCGAACAAGGAGGCGGCTTTTTCCGTTTCTCAAACCCACTCTCTAAAATCCTCGATTTCTTCTACTTTCCCTTCATTTCCACAGGATTTTCTTTGATGGGTATTGATGAAATGTACTTCAAATTCATTTGAGCTTGAATTGGAGTTTATCAAAATGGATTAGTAGAGTCGATACTGGAGTTGTGTGTTGATTTTTTTtCTCTTTATTGGACATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGGTGCTTATTAGTCTTATTCGCTTTTCTCATATGTTAATGCTTTTTTtCTTTATGGAAATTAATGTGTTCTATAATTTGATGTTTCAACATTGGTGATGTGGATAAGATTCTTGCTTCTTCTTTTTTtCTTTCTTTCTCTCGTTGGTGTGGGGTGTGAAAACTTGTTTTTTTTTtCTTtCGACCAAGTGCGAATATTTGTTGGTGCTTTGGGTTGAAATAATTCGAATCAACAACAAGACAGTCTTTGGATTTGGGAACAGACGGTCTCTGCTGTTATTGAATTTATTACGTATTGGGAGTGTTTACAATGATTTTCACCCTGATATCTGAGAGCTTTGCTATCTGTAGCCTTTTGTTTTGATGTTTACTGAGTAATAAGATGGTTATGGTCTGATAATCTTTTGATATTGAAATTGTTATTGTCTCATTGTGCTATATGATCTATAAATGTTCATTGTGTTCTTAACGATATCATTTGATTTAATGGACTCTGTGTTTTTATTTTCATTTCCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGGTAGGATTTCTTATACTATCTTTTATTCGTTGATTCATGTTATATCATGCAATTTAATATCTATCTGCTTTGAACCTCAGATAATTTGTTTATATTCAAAATGGCTATAGAATGGATCGTCTGGTTTCTATTTTCTAGATTTCTCATAGCCACCATATCTATTATTAATTATCTTTCACTGTCATTTACCTGGTGAGATGCCTATTTTGACATTTCCCAAGATGTTTATCTCATTTAAATCCAATGGCAATGTTTTTGTTTTTGATTACTAAATGTTATGTTCTTGGTTCACTTTTGGAATTGTGCATAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTtCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGGTCAGTACAGTTTCTTACTTATTTATCTCTTAACCTCGTTAATATTTCATATATACTAAGTAATCTTTACTGTGTGTCAACCTGTCCCTTATCAACAAGGGTGATTGATGGCATAAGGGAGCTCTTAGATCGGAAATAGTTCCTTATAAGTTTCATGTTCTGTTAAATATGAAATTTGTTCTCATGTTAAATATTTACTTTGGAGACTTAGATTCTGCTGGAAACTTTTAGTTCCTGTTCAAAATTCTCTATTGTAAACTTCGAATTATTTTCTCATTGCAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTtAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTAAGAATATTCATCTATGATCATTCTCCCTCCACATCTTTTGTTGTCTTGCCCATCCATGCTGGACTTGCTTCATTTAGTTATTCTATGGAGAAAAAGTCATATATTAGTCTATCATTCCCCTCGACTACATTTACATGCCCTTAATAATATTTTATTCAATCATCGATGTCGTGGCGTTTAATTTAAAGAGTTCCTATTGAACAGGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAAATAAGTTCCAAAGGGCAAAGTGCAGTGAACTTAATAAATTGTTGACCTGATTTTTTGTGTTCATTCCTGCTACATTGCAGTCGAATAGAGCGTTTCCAGAACATATTGCTCTATAAAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGGTGATGTTATGATAAAGGGAGAATGAAGTATTGAAGAAGATGGTGATCGTTCCTGTATCTTTTTGTACTTTCTTTTCCTTTGAATGAATATCCTAGCAGAGAGAAGTCAACTTTTAGTACCCTCTTCTTCTTTCAAGCTGCTGTTGGAACAATCTACATGACTTCATTTTTCTGAAACTGTTTTAGGAAATTTTTGGAACTGAGGATGGAATATGAGCTCTTATTGCTGAGTTCCATGAATAGCAACTG TGGAGGATAGGCGACTTGAGATGGAAATAAGACGCTCGAAAATACATATTATTCTTTTCCCTCACCCGCCGTTTGAGGTTACCAATATCAATAGTCACCACAGCGAACAAGGAGGCGGCTTTTTCCGTTTCTCAAACCCACTCTCTAAAATCCTCGATTTCTTCTACTTTCCCTTCATTTCCACAGGATTTTCTTTGATGGGTATTGATGAAATGTACTTCAAATTCATTTGAGCTTGAATTGGAGTTTATCAAAATGGATTAGTAGAGTCGATACTGGAGTTGTGTGTTGATTTTTTTTCTCTTTATTGGACATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTTCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTTAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAAAGTGCAAAATAAGTTCCAAAGGGCAAAGTGCAGTGAACTTAATAAATTGTTGACCTGATTTTTTGTGTTCATTCCTGCTACATTGCAGTCGAATAGAGCGTTTCCAGAACATATTGCTCTATAAAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGGTGATGTTATGATAAAGGGAGAATGAAGTATTGAAGAAGATGGTGATCGTTCCTGTATCTTTTTGTACTTTCTTTTCCTTTGAATGAATATCCTAGCAGAGAGAAGTCAACTTTTAGTACCCTCTTCTTCTTTCAAGCTGCTGTTGGAACAATCTACATGACTTCATTTTTCTGAAACTGTTTTAGGAAATTTTTGGAACTGAGGATGGAATATGAGCTCTTATTGCTGAGTTCCATGAATAGCAACTG ATGTCTGTTAAATTTGCTTCTATTTCTTGCTCGGTTCCTACTCTATCTTCACCCTCCGATGGCCGGAGAAGCTTTCAGCTAAGCTTTTCACGAGGATTATATGGCATTGGCAGCCAACAACGTAGTTTCCAGAACTTAACGTTTGCTGAAGTTGAATCCATCAAGTTAATGTATGGATTGCTGAGGTCTTGGAGCAGATTTCCAAGGAGAAAAAATGTTCTCTCTGCTATTTCAGAGAACCAGTCTCAATGGTGTGAGCAAGTTGAGCTAGAGCGAGTAAATGAGCATCCCACTGATGAAGATATCTCCCTCGAAAACAATTCATTTTTACATTATGAGGGTACTGGTGGGAAACCGGGTTTTATTtCTTTTTACAACCATTCTAAAGAAGGAAAACGGATCCCTTTGTCTAGTGTGCAAAGCAATCAATACAAATTCTTATGGTTTGTTGGTCCGGCTGTCCTCGTAGCTTCTTTCATTTTCCCCTCTCTTTATCTGCGGAAACTACTTTCAAATATCTTTGAGGACTCTCTGTTAACAGATTTCCTTATATTATTCTTCACGGAAGCACTATTCTATTGTGGTGTTGCGGTGTTTCTTTTTTtAATTGATCGTTCAAGGAGAACTGCTGAACCTGACACTCTGAAAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGAGGATCTCTTCTGTAGCTACCTTAGCACTCAGTTTAATAATACCAATGGTCACCATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAACACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGACGCAAGAAATCATGTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCGAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGAATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGGTTTTTCCCATCAAATGCTGCAACAGTGCAGTAA MSVKFASISCSVPTLSSPSDGRRSFQLSFSRGLYGIGSQQRSFQNLTFAEVESIKLMYGLLRSWSRFPRRKNVLSAISENQSQWCEQVELERVNEHPTDEDISLENNSFLHYEGTGGKPGFISFYNHSKEGKRIPLSSVQSNQYKFLWFVGPAVLVASFIFPSLYLRKLLSNIFEDSLLTDFLILFFTEALFYCGVAVFLFLIDRSRRTAEPDTLKNSYQTLSNQFGQRISSVATLALSLIIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARRKKSCSWPVIPIVFQVYRLHQLNRAAQLVTALSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIWSLSSFLMRFFPSNAATVQ*
BLAST of Cucsa.196760 vs. TrEMBL
Match: A0A0A0LS19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 721.1 bits (1860), Expect = 6.9e-205 Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 1
BLAST of Cucsa.196760 vs. TrEMBL
Match: M5WMH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007436mg PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 3.1e-120 Identity = 234/370 (63.24%), Postives = 279/370 (75.41%), Query Frame = 1
BLAST of Cucsa.196760 vs. TrEMBL
Match: W9RID3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014580 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 4.4e-119 Identity = 235/365 (64.38%), Postives = 274/365 (75.07%), Query Frame = 1
BLAST of Cucsa.196760 vs. TrEMBL
Match: B9I3H4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09060g PE=4 SV=2) HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117 Identity = 238/372 (63.98%), Postives = 278/372 (74.73%), Query Frame = 1
BLAST of Cucsa.196760 vs. TrEMBL
Match: V4TT63_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020708mg PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.6e-116 Identity = 231/371 (62.26%), Postives = 279/371 (75.20%), Query Frame = 1
BLAST of Cucsa.196760 vs. TAIR10
Match: AT5G63040.1 (AT5G63040.1 unknown protein) HSP 1 Score: 335.5 bits (859), Expect = 4.1e-92 Identity = 199/365 (54.52%), Postives = 242/365 (66.30%), Query Frame = 1
BLAST of Cucsa.196760 vs. TAIR10
Match: AT1G48460.1 (AT1G48460.1 unknown protein) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37 Identity = 82/249 (32.93%), Postives = 130/249 (52.21%), Query Frame = 1
BLAST of Cucsa.196760 vs. NCBI nr
Match: gi|778655605|ref|XP_011656390.1| (PREDICTED: uncharacterized protein LOC105435726 [Cucumis sativus]) HSP 1 Score: 721.1 bits (1860), Expect = 9.9e-205 Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 1
BLAST of Cucsa.196760 vs. NCBI nr
Match: gi|659129154|ref|XP_008464550.1| (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 694.5 bits (1791), Expect = 9.9e-197 Identity = 354/366 (96.72%), Postives = 357/366 (97.54%), Query Frame = 1
BLAST of Cucsa.196760 vs. NCBI nr
Match: gi|470125961|ref|XP_004298964.1| (PREDICTED: uncharacterized protein LOC101308083 [Fragaria vesca subsp. vesca]) HSP 1 Score: 442.6 bits (1137), Expect = 6.8e-121 Identity = 238/368 (64.67%), Postives = 283/368 (76.90%), Query Frame = 1
BLAST of Cucsa.196760 vs. NCBI nr
Match: gi|658032556|ref|XP_008351788.1| (PREDICTED: uncharacterized protein LOC103415229 [Malus domestica]) HSP 1 Score: 442.6 bits (1137), Expect = 6.8e-121 Identity = 237/361 (65.65%), Postives = 277/361 (76.73%), Query Frame = 1
BLAST of Cucsa.196760 vs. NCBI nr
Match: gi|1009180919|ref|XP_015871886.1| (PREDICTED: uncharacterized protein LOC107408965, partial [Ziziphus jujuba]) HSP 1 Score: 440.7 bits (1132), Expect = 2.6e-120 Identity = 225/343 (65.60%), Postives = 275/343 (80.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |