Csa1G000700 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGTACGTACTTACTATTTCTTATTCTCTTATATATATATTAATTATTCAACCCTTTTCAGTTTTATATTGTTGAGATTTTATTGATAATATTAGTTCATTTCCCTGATATATATATATATGGTTTGTAATTCAATTAATGTATATGTATACAGGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTAATTGAACTTAATTTAATATAATATAAACACGTACCACACCCTTCCACCTTCTTCCTCATCTCTCTCTCTCATCTCTACCTCTACTTTTACTAGAAACTAAAATCATTATTGGAGTTTAATTTGTCAGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACCACCTAATGCTACCACTATTAAAATTTTCCTCATTCTCTCTTTACGTTCCAACAATACATAATATTCCATTTTTATTATAAATTTCAATCTCTGATCCCTATAGCTAATTGATTTCAATATTACATATAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAACCCCAATTCCTAATCATACCCATTTCACTCATTTAATTTTATTTATTTACTTCAAGTACTGGCCGGTACATACAAAAGTTTGTTGAATTTTGTTATTATTCCTCCTCACGAATTAATCATTAGTTACTCTCTCTGTATGTGTACTTAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGGTGCTGCTCTCTCTAAACAATTACATTATTTTTTATTAATTATCAATTATATATATTAGAGAGATCAGTATACACATTTAATTAACAGTTACCTGAAGAAGAAGAAGAAGAAAAAACTAAGTTAATTGAATTGAATTTGTTGCTTCAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYMPSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS*
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35 Identity = 97/184 (52.72%), Postives = 114/184 (61.96%), Query Frame = 1
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.8e-32 Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 1
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31 Identity = 84/158 (53.16%), Postives = 96/158 (60.76%), Query Frame = 1
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.9e-30 Identity = 80/135 (59.26%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1
BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0A0LTX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 1.0e-160 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Csa1G000700 vs. TrEMBL
Match: E5GBM5_CUCME (BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.8e-65 Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of Csa1G000700 vs. TrEMBL
Match: B9RA85_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0D9XFI2_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34 Identity = 98/201 (48.76%), Postives = 120/201 (59.70%), Query Frame = 1
BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0E0B546_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.5e-34 Identity = 99/200 (49.50%), Postives = 119/200 (59.50%), Query Frame = 1
BLAST of Csa1G000700 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36 Identity = 97/184 (52.72%), Postives = 114/184 (61.96%), Query Frame = 1
BLAST of Csa1G000700 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 139.4 bits (350), Expect = 3.3e-33 Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 1
BLAST of Csa1G000700 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 137.9 bits (346), Expect = 9.5e-33 Identity = 84/158 (53.16%), Postives = 96/158 (60.76%), Query Frame = 1
BLAST of Csa1G000700 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31 Identity = 80/135 (59.26%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of Csa1G000700 vs. TAIR10
Match: AT3G23690.1 (AT3G23690.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 131.3 bits (329), Expect = 8.9e-31 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1
BLAST of Csa1G000700 vs. NCBI nr
Match: gi|778655231|ref|XP_004138026.2| (PREDICTED: transcription factor bHLH137-like [Cucumis sativus]) HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-160 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Csa1G000700 vs. NCBI nr
Match: gi|659128812|ref|XP_008464382.1| (PREDICTED: transcription factor bHLH137-like [Cucumis melo]) HSP 1 Score: 530.4 bits (1365), Expect = 1.9e-147 Identity = 258/276 (93.48%), Postives = 262/276 (94.93%), Query Frame = 1
BLAST of Csa1G000700 vs. NCBI nr
Match: gi|307136009|gb|ADN33865.1| (bHLH transcription factor [Cucumis melo subsp. melo]) HSP 1 Score: 256.9 bits (655), Expect = 4.0e-65 Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of Csa1G000700 vs. NCBI nr
Match: gi|223550225|gb|EEF51712.1| (DNA binding protein, putative [Ricinus communis]) HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
BLAST of Csa1G000700 vs. NCBI nr
Match: gi|1000984518|ref|XP_015578685.1| (PREDICTED: transcription factor bHLH137 [Ricinus communis]) HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|