Csa1G000700 (gene) Cucumber (Chinese Long) v2

NameCsa1G000700
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor, putative; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
LocationChr1 : 113139 .. 114687 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGTACGTACTTACTATTTCTTATTCTCTTATATATATATTAATTATTCAACCCTTTTCAGTTTTATATTGTTGAGATTTTATTGATAATATTAGTTCATTTCCCTGATATATATATATATGGTTTGTAATTCAATTAATGTATATGTATACAGGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTAATTGAACTTAATTTAATATAATATAAACACGTACCACACCCTTCCACCTTCTTCCTCATCTCTCTCTCTCATCTCTACCTCTACTTTTACTAGAAACTAAAATCATTATTGGAGTTTAATTTGTCAGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACCACCTAATGCTACCACTATTAAAATTTTCCTCATTCTCTCTTTACGTTCCAACAATACATAATATTCCATTTTTATTATAAATTTCAATCTCTGATCCCTATAGCTAATTGATTTCAATATTACATATAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAACCCCAATTCCTAATCATACCCATTTCACTCATTTAATTTTATTTATTTACTTCAAGTACTGGCCGGTACATACAAAAGTTTGTTGAATTTTGTTATTATTCCTCCTCACGAATTAATCATTAGTTACTCTCTCTGTATGTGTACTTAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGGTGCTGCTCTCTCTAAACAATTACATTATTTTTTATTAATTATCAATTATATATATTAGAGAGATCAGTATACACATTTAATTAACAGTTACCTGAAGAAGAAGAAGAAGAAAAAACTAAGTTAATTGAATTGAATTTGTTGCTTCAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA

mRNA sequence

ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA

Coding sequence (CDS)

ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCATAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCCCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA

Protein sequence

MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYMPSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS*
BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 97/184 (52.72%), Postives = 114/184 (61.96%), Query Frame = 1

Query: 65  SHPPSAEEEDPNGSKGGECKRRCYNRAKAG--GRSGCKKKMMIKTQHDPAD--HVRARRG 124
           SH PSA     N  K    K R  N +K G  GR   K+K   K +  P D  HVRARRG
Sbjct: 86  SHGPSAIT---NTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRG 145

Query: 125 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 184
           QATDSHSLAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSM
Sbjct: 146 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 205

Query: 185 KLASLDPVLHDFGMDFPEVLL---VGTPASEILNGNGMVSHSE-HAELAYNNMAPIYNTF 241
           KL S+ PV++DFG D   ++L   +G+P       N M + +     L  N++ P +   
Sbjct: 206 KLTSISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSVVPTHAQV 265

BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.8e-32
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 1

Query: 63  SHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD----HVRAR 122
           SH    S EE D NG +    KR       + G+     K   K   DP      HVRAR
Sbjct: 251 SHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRAR 310

Query: 123 RGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFL 182
           RGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 311 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 370

Query: 183 SMKLASLDPVLHDFGMD 196
           SMKLA+++P + DF ++
Sbjct: 371 SMKLATVNPQM-DFNLE 382

BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 84/158 (53.16%), Postives = 96/158 (60.76%), Query Frame = 1

Query: 79  KGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD--HVRARRGQATDSHSLAERVRRQK 138
           KGG+ +R   +  +  G     K    K    P D  HVRARRGQATDSHSLAERVRR+K
Sbjct: 263 KGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 322

Query: 139 ISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDF 198
           I +RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+S++    DF +D 
Sbjct: 323 IGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDA 382

Query: 199 PEVLLVGTPAS------EILNGNGMVSHSEHAELAYNN 229
                V  P+S      E L       H +     YNN
Sbjct: 383 LVSKDVMIPSSNNRLHEEGLQSKSSSHHHQQQLNIYNN 420

BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-30
Identity = 80/135 (59.26%), Postives = 92/135 (68.15%), Query Frame = 1

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PS+ S     EE++ +  K          R K    +G K K +    +    HVRARRG
Sbjct: 216 PSAVSSSKEIEEKEDSDPK----------RCKKSEENGDKTKSI--DPYKDYIHVRARRG 275

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRR+KIS+RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSM
Sbjct: 276 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 335

Query: 181 KLASLDPVLHDFGMD 196
           KL+S++  L DF MD
Sbjct: 336 KLSSVNTRL-DFNMD 337

BLAST of Csa1G000700 vs. Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1

Query: 77  GSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD------HVRARRGQATDSHSLAE 136
           GSKGG+  ++    +   G   C  K   K    P +      HVRARRGQATDSHSLAE
Sbjct: 147 GSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAE 206

Query: 137 RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDP 188
           R RR+KIS+RM +LQ LVPGC+++TGKA+MLDEIINYVQSLQ QVEFLSMKLA+++P
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 263

BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0A0LTX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.0e-160
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG
Sbjct: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180

Query: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240
           KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG
Sbjct: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240

Query: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS
Sbjct: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 275

BLAST of Csa1G000700 vs. TrEMBL
Match: E5GBM5_CUCME (BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.8e-65
Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1

Query: 141 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 200
           MKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLASL PVL+DFGMDFPEVL
Sbjct: 1   MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60

Query: 201 LVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPS 260
           +VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQATG GGGGSPILTPGNSSFINPS
Sbjct: 61  IVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQATGSGGGGSPILTPGNSSFINPS 120

Query: 261 PLFLDHGNTSQLHLS 276
           PLF+DHGNTS LHLS
Sbjct: 121 PLFIDHGNTSLLHLS 135

BLAST of Csa1G000700 vs. TrEMBL
Match: B9RA85_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0D9XFI2_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 98/201 (48.76%), Postives = 120/201 (59.70%), Query Frame = 1

Query: 72  EEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD---HVRARRGQATDSHSL 131
           EED         K    N  K GG    KK  M + + +      HVRARRGQATDSHSL
Sbjct: 65  EEDSASLNSAHSKEAKENSRKRGG----KKHNMDQMEEEAPQGFIHVRARRGQATDSHSL 124

Query: 132 AERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPV 191
           AERVRR++IS+RM++LQ LVPGC KVTGKAL+LDEIINYVQSLQNQVEFLSM++ASL PV
Sbjct: 125 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPV 184

Query: 192 LHDFGMD--------------FPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYN 251
           L+ FG+D              F E   V  PAS +  G+   SHS+ A +  +N +P   
Sbjct: 185 LYGFGIDSDSFSDHSQKIEGMFHEA--VAIPASVLNRGSPAQSHSQ-AIMDTSNSSPTPY 244

Query: 252 TFQATGGGGGGSPILTPGNSS 256
           + Q  GG    S +  P + S
Sbjct: 245 SIQVQGGNNSLSQVSIPKHCS 258

BLAST of Csa1G000700 vs. TrEMBL
Match: A0A0E0B546_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-34
Identity = 99/200 (49.50%), Postives = 119/200 (59.50%), Query Frame = 1

Query: 72  EEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRGQATDSHSLAER 131
           EED         K    N  K GG+   + +M  +       HVRARRGQATDSHSLAER
Sbjct: 65  EEDTASLNSAHSKEAKENGRKRGGKKHSRDQMEEEAPQGFI-HVRARRGQATDSHSLAER 124

Query: 132 VRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHD 191
           VRR++IS+RM++LQ LVPGC KVTGKAL+LDEIINYVQSLQNQVEFLSM++ASL PVL+ 
Sbjct: 125 VRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYG 184

Query: 192 FGMD--------------FPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQ 251
           FG+D              F E   V  PAS +LN  G      HA +  +N +P   T Q
Sbjct: 185 FGIDSDAFSDHSQKMEGMFHEA--VAIPAS-VLN-RGSSPAQSHAIMDTSNTSPTPYTLQ 244

Query: 252 ATGGGGGGSPILTPGNSSFI 258
             GG    S  L+  N S+I
Sbjct: 245 VQGGSNNNS--LSQDNGSYI 257

BLAST of Csa1G000700 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 97/184 (52.72%), Postives = 114/184 (61.96%), Query Frame = 1

Query: 65  SHPPSAEEEDPNGSKGGECKRRCYNRAKAG--GRSGCKKKMMIKTQHDPAD--HVRARRG 124
           SH PSA     N  K    K R  N +K G  GR   K+K   K +  P D  HVRARRG
Sbjct: 86  SHGPSAIT---NTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRG 145

Query: 125 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 184
           QATDSHSLAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSM
Sbjct: 146 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 205

Query: 185 KLASLDPVLHDFGMDFPEVLL---VGTPASEILNGNGMVSHSE-HAELAYNNMAPIYNTF 241
           KL S+ PV++DFG D   ++L   +G+P       N M + +     L  N++ P +   
Sbjct: 206 KLTSISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSVVPTHAQV 265

BLAST of Csa1G000700 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.3e-33
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 1

Query: 63  SHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD----HVRAR 122
           SH    S EE D NG +    KR       + G+     K   K   DP      HVRAR
Sbjct: 251 SHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRAR 310

Query: 123 RGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFL 182
           RGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 311 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 370

Query: 183 SMKLASLDPVLHDFGMD 196
           SMKLA+++P + DF ++
Sbjct: 371 SMKLATVNPQM-DFNLE 382

BLAST of Csa1G000700 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 9.5e-33
Identity = 84/158 (53.16%), Postives = 96/158 (60.76%), Query Frame = 1

Query: 79  KGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD--HVRARRGQATDSHSLAERVRRQK 138
           KGG+ +R   +  +  G     K    K    P D  HVRARRGQATDSHSLAERVRR+K
Sbjct: 263 KGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 322

Query: 139 ISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDF 198
           I +RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+S++    DF +D 
Sbjct: 323 IGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDA 382

Query: 199 PEVLLVGTPAS------EILNGNGMVSHSEHAELAYNN 229
                V  P+S      E L       H +     YNN
Sbjct: 383 LVSKDVMIPSSNNRLHEEGLQSKSSSHHHQQQLNIYNN 420

BLAST of Csa1G000700 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 80/135 (59.26%), Postives = 92/135 (68.15%), Query Frame = 1

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PS+ S     EE++ +  K          R K    +G K K +    +    HVRARRG
Sbjct: 216 PSAVSSSKEIEEKEDSDPK----------RCKKSEENGDKTKSI--DPYKDYIHVRARRG 275

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRR+KIS+RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSM
Sbjct: 276 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 335

Query: 181 KLASLDPVLHDFGMD 196
           KL+S++  L DF MD
Sbjct: 336 KLSSVNTRL-DFNMD 337

BLAST of Csa1G000700 vs. TAIR10
Match: AT3G23690.1 (AT3G23690.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 8.9e-31
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1

Query: 77  GSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD------HVRARRGQATDSHSLAE 136
           GSKGG+  ++    +   G   C  K   K    P +      HVRARRGQATDSHSLAE
Sbjct: 147 GSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAE 206

Query: 137 RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDP 188
           R RR+KIS+RM +LQ LVPGC+++TGKA+MLDEIINYVQSLQ QVEFLSMKLA+++P
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 263

BLAST of Csa1G000700 vs. NCBI nr
Match: gi|778655231|ref|XP_004138026.2| (PREDICTED: transcription factor bHLH137-like [Cucumis sativus])

HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-160
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG
Sbjct: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180

Query: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240
           KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG
Sbjct: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240

Query: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS
Sbjct: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 275

BLAST of Csa1G000700 vs. NCBI nr
Match: gi|659128812|ref|XP_008464382.1| (PREDICTED: transcription factor bHLH137-like [Cucumis melo])

HSP 1 Score: 530.4 bits (1365), Expect = 1.9e-147
Identity = 258/276 (93.48%), Postives = 262/276 (94.93%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTPHNY HHLLPPQ QSA ASSSNYQTPQHHH L PDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYDHHLLPPQIQSAPASSSNYQTPQHHHPLGPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRR-CYNRAKAGGRSGCKKKMMIKTQHDPADHVRARR 120
           PSSHSHPPSAEEED NGSKGGECKRR CYNRAKAG RSGCKKKM IKTQHDPADHVRARR
Sbjct: 61  PSSHSHPPSAEEEDQNGSKGGECKRRRCYNRAKAGERSGCKKKMTIKTQHDPADHVRARR 120

Query: 121 GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLS 180
           GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLS
Sbjct: 121 GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLS 180

Query: 181 MKLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQAT 240
           MKLASL PVL+DFGMDFPEVL+VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQAT
Sbjct: 181 MKLASLHPVLYDFGMDFPEVLIVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQAT 240

Query: 241 GGGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           G GGGGSPILTPGNSSFINPSPLF+DHGNTS LHLS
Sbjct: 241 GSGGGGSPILTPGNSSFINPSPLFIDHGNTSLLHLS 276

BLAST of Csa1G000700 vs. NCBI nr
Match: gi|307136009|gb|ADN33865.1| (bHLH transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 256.9 bits (655), Expect = 4.0e-65
Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1

Query: 141 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 200
           MKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLASL PVL+DFGMDFPEVL
Sbjct: 1   MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60

Query: 201 LVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPS 260
           +VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQATG GGGGSPILTPGNSSFINPS
Sbjct: 61  IVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQATGSGGGGSPILTPGNSSFINPS 120

Query: 261 PLFLDHGNTSQLHLS 276
           PLF+DHGNTS LHLS
Sbjct: 121 PLFIDHGNTSLLHLS 135

BLAST of Csa1G000700 vs. NCBI nr
Match: gi|223550225|gb|EEF51712.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

BLAST of Csa1G000700 vs. NCBI nr
Match: gi|1000984518|ref|XP_015578685.1| (PREDICTED: transcription factor bHLH137 [Ricinus communis])

HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH137_ARATH2.5e-3552.72Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1[more]
BH049_ARATH5.8e-3258.39Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1[more]
BH078_ARATH1.7e-3153.16Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1[more]
BH062_ARATH1.9e-3059.26Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1[more]
BH077_ARATH1.6e-2959.83Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LTX6_CUCSA1.0e-160100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1[more]
E5GBM5_CUCME2.8e-6593.33BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9RA85_RICCO3.5e-3648.00DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1[more]
A0A0D9XFI2_9ORYZ1.9e-3448.76Uncharacterized protein OS=Leersia perrieri PE=4 SV=1[more]
A0A0E0B546_9ORYZ2.5e-3449.50Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G50915.11.4e-3652.72 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G68920.13.3e-3358.39 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G48560.19.5e-3353.16 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G07340.11.1e-3159.26 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G23690.18.9e-3159.83 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778655231|ref|XP_004138026.2|1.5e-160100.00PREDICTED: transcription factor bHLH137-like [Cucumis sativus][more]
gi|659128812|ref|XP_008464382.1|1.9e-14793.48PREDICTED: transcription factor bHLH137-like [Cucumis melo][more]
gi|307136009|gb|ADN33865.1|4.0e-6593.33bHLH transcription factor [Cucumis melo subsp. melo][more]
gi|223550225|gb|EEF51712.1|5.1e-3648.00DNA binding protein, putative [Ricinus communis][more]
gi|1000984518|ref|XP_015578685.1|5.1e-3648.00PREDICTED: transcription factor bHLH137 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G000700.1Csa1G000700.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 121..187
score: 2.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 125..172
score: 7.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 127..177
score: 7.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 121..171
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 119..188
score: 1.14
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 114..195
score: 3.5
NoneNo IPR availablePANTHERPTHR12565:SF90TRANSCRIPTION FACTOR BHLH137coord: 114..195
score: 3.5

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa1G000700Csa1G051740Cucumber (Chinese Long) v2cucuB002