CSPI01G00200 (gene) Wild cucumber (PI 183967)

NameCSPI01G00200
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBHLH transcription factor
LocationChr1 : 113899 .. 115982 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTGGAGTTCAACTTGATTGGCGTTTTTATCCTTATGTATATAAATTAAACCAAGCTGAGGTTTGAGGTTTGTTCGGAGAGTAGTATATAGTTGTAGTTGTAGCTATTACACACACTGAAGAAGAAGAATATATAATCTTGACTCCCTTGCTGGCCTTTGCTCAAAAAATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGTACGTACTTACTATTTCTTATTCTCTTATATATATATTAATTATTCAACCCTTTTCAGTTTTATATTGTTGAGATTTTATTGATAATATTAATTCATTTCCCTGGTATATATATATATGGTTTGTAATTCAATTAATGTATATGTATACAGGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTAATTGAACTTAATTTAATATAATATAAACACGTACCACACACTTCCACCTTCTTCCTCATCTCTCTCTCTCATCTCTACCTCTACTTTTACTAGAAACTAAAATCATTATTGGAGTTTAATTTGTCAGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACCACCTAATGCTACCACTATTAAAATTTTCCCCATTCTCTCTTTACGTTCCAACAATAAATAATATTCCATTTTTATTATAAATTTCAATCTCTGATCCCTATAGCTAATTGATTTCAAAATTATATATAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAACCCCAATTCCTAATCATACCCATTTCACTCATTTAATTTTATTTATTTACTTCAAGTACTGGCCGGTACATACAAAAGTTTGTTGAATTTTGTTATTATTCCTCCTCACGAATTAATCATTAGTTACTCTCTCTGTATGTGTACTTAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGGTGCTGCTCTCTCTAAACAATTACATTATTTTTTATTAATTATCAATTATATATATTAGAGAGATCAGTATACACATTTAATTAACAGTTACCTGAAGAAGAAGAAGAAGAAAAAACTAAGTTAATTGAATTGAATTTGTTGCTTCAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGATTTCCTTATTTACACACAAAACAGAAAGAGATCAAAGACATCATATATAATTATTAATTAAATTTGAGTGGAGAGAGAACAGTGGATATGGTTCTATATATATGTATTTACATATCAACGACTGAACTCTCTTGATCTATAAATTCATATATACTTTATATATATACGTCCCATTAATTAACTATTGCGTGAATATGTGCAAGTCTTATCACTCCGTGAATCAGTGGGTATACATTACACCTCTGCAATAGTAAGCCAACTCTTGTGGAGTTGGGAAAAAGTACTGTTGTGGGACTGCAGTTTAATTTTTGTTTGTAAACAAATCGTAAATCATATATATTTATATATCGGTGGTTTTAATTGGC

mRNA sequence

ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA

Coding sequence (CDS)

ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.0e-33
Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 1

Query: 65  SHPPSAEEEDPNGSKGGECKRRCYNRAKAG--GRSGCKKKMMIKTQHDPAD--HVRARRG 124
           SH PSA     N  K    K R  N +K G  GR   K+K   K +  P D  HVRARRG
Sbjct: 86  SHGPSAIT---NTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRG 145

Query: 125 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 184
           QATDSHSLAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSM
Sbjct: 146 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 205

Query: 185 KLASLDPVLHDFGMDFPEVLL---VGTPASEILNGNGMVSHSE-HAELAYNNMAPIYNTF 241
           KL S+ PV++DFG D   ++L   +G+P       N M + +     L  N++ P +   
Sbjct: 206 KLTSISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSVVPTHAQV 265

BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.3e-30
Identity = 84/158 (53.16%), Postives = 98/158 (62.03%), Query Frame = 1

Query: 79  KGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD--HVRARRGQATDSHSLAERVRRQK 138
           KGG+ +R   +  +  G     K    K    P D  HVRARRGQATDSHSLAERVRR+K
Sbjct: 263 KGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 322

Query: 139 ISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDF 198
           I +RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+S++    DF +D 
Sbjct: 323 IGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDA 382

Query: 199 PEVLLVGTPAS------EILNGNGMVSHSEHAELAYNN 229
                V  P+S      E L       H +     YNN
Sbjct: 383 LVSKDVMIPSSNNRLHEEGLQSKSSSHHHQQQLNIYNN 420

BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29
Identity = 80/137 (58.39%), Postives = 94/137 (68.61%), Query Frame = 1

Query: 63  SHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD----HVRAR 122
           SH    S EE D NG +    KR       + G+     K   K   DP      HVRAR
Sbjct: 251 SHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRAR 310

Query: 123 RGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFL 182
           RGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 311 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 370

Query: 183 SMKLASLDPVLHDFGMD 196
           SMKLA+++P + DF ++
Sbjct: 371 SMKLATVNPQM-DFNLE 382

BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.6e-28
Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 1

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PS+ S     EE++ +  K          R K    +G K K +    +    HVRARRG
Sbjct: 216 PSAVSSSKEIEEKEDSDPK----------RCKKSEENGDKTKSI--DPYKDYIHVRARRG 275

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRR+KIS+RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSM
Sbjct: 276 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 335

Query: 181 KLASLDPVLHDFGMD 196
           KL+S++  L DF MD
Sbjct: 336 KLSSVNTRL-DFNMD 337

BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1

Query: 114 HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQN 173
           H+RARRGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC KVTGKA+MLDEIINYVQSLQ 
Sbjct: 222 HMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQC 281

Query: 174 QVEFLSMKLASLDPVLHDFGMD 196
           Q+EFLSMKL++++PVL DF ++
Sbjct: 282 QIEFLSMKLSAVNPVL-DFNLE 302

BLAST of CSPI01G00200 vs. TrEMBL
Match: A0A0A0LTX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 9.9e-156
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPRNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTP NYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG
Sbjct: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180

Query: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240
           KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG
Sbjct: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240

Query: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS
Sbjct: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 275

BLAST of CSPI01G00200 vs. TrEMBL
Match: E5GBM5_CUCME (BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.6e-65
Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1

Query: 141 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 200
           MKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLASL PVL+DFGMDFPEVL
Sbjct: 1   MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60

Query: 201 LVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPS 260
           +VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQATG GGGGSPILTPGNSSFINPS
Sbjct: 61  IVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQATGSGGGGSPILTPGNSSFINPS 120

Query: 261 PLFLDHGNTSQLHLS 276
           PLF+DHGNTS LHLS
Sbjct: 121 PLFIDHGNTSLLHLS 135

BLAST of CSPI01G00200 vs. TrEMBL
Match: B9RA85_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

BLAST of CSPI01G00200 vs. TrEMBL
Match: W9R5J1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008847 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 85/144 (59.03%), Postives = 101/144 (70.14%), Query Frame = 1

Query: 106 KTQHDPAD---HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLD 165
           K Q +P     HVRARRGQATDSHSLAER+RR+KIS+RMK+LQ LVPGC KVTGKALMLD
Sbjct: 144 KDQDEPPTGYIHVRARRGQATDSHSLAERLRREKISERMKMLQKLVPGCEKVTGKALMLD 203

Query: 166 EIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVLL----VGTPASEILNGNGMVSH 225
           EIINYVQSLQNQVEFLSMKLASL+P+ +DFGMD    L+    + T AS+I       S 
Sbjct: 204 EIINYVQSLQNQVEFLSMKLASLNPMFYDFGMDLDAFLVRPVGLNTLASQINQSVPQCSQ 263

Query: 226 SEHAEL---AYNNMAPIYNTFQAT 240
           ++   +    +N+  P    F  T
Sbjct: 264 NQPTAVFAADHNSAVPAPTNFNVT 287

BLAST of CSPI01G00200 vs. TrEMBL
Match: A0A0B5E953_CAPAN (Transcription factor Upa20 OS=Capsicum annuum GN=Upa20 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-32
Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 1

Query: 114 HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQN 173
           HVRARRGQATDSHSLAERVRR+KIS+RMK+LQ+LVPGC KVTGKALMLDEIINYVQSLQN
Sbjct: 163 HVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQN 222

Query: 174 QVEFLSMKLASLDPVLHDFGMDFPEVLLVGTPASEILNG 213
           QVEFLSMKLASL+P+ +DFGMD   +++   P  + L+G
Sbjct: 223 QVEFLSMKLASLNPMYYDFGMDLDALMV--RPDDQNLSG 259

BLAST of CSPI01G00200 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 1

Query: 65  SHPPSAEEEDPNGSKGGECKRRCYNRAKAG--GRSGCKKKMMIKTQHDPAD--HVRARRG 124
           SH PSA     N  K    K R  N +K G  GR   K+K   K +  P D  HVRARRG
Sbjct: 86  SHGPSAIT---NTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRG 145

Query: 125 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 184
           QATDSHSLAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSM
Sbjct: 146 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 205

Query: 185 KLASLDPVLHDFGMDFPEVLL---VGTPASEILNGNGMVSHSE-HAELAYNNMAPIYNTF 241
           KL S+ PV++DFG D   ++L   +G+P       N M + +     L  N++ P +   
Sbjct: 206 KLTSISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSVVPTHAQV 265

BLAST of CSPI01G00200 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31
Identity = 84/158 (53.16%), Postives = 98/158 (62.03%), Query Frame = 1

Query: 79  KGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD--HVRARRGQATDSHSLAERVRRQK 138
           KGG+ +R   +  +  G     K    K    P D  HVRARRGQATDSHSLAERVRR+K
Sbjct: 263 KGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 322

Query: 139 ISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDF 198
           I +RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+S++    DF +D 
Sbjct: 323 IGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDA 382

Query: 199 PEVLLVGTPAS------EILNGNGMVSHSEHAELAYNN 229
                V  P+S      E L       H +     YNN
Sbjct: 383 LVSKDVMIPSSNNRLHEEGLQSKSSSHHHQQQLNIYNN 420

BLAST of CSPI01G00200 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 80/137 (58.39%), Postives = 94/137 (68.61%), Query Frame = 1

Query: 63  SHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD----HVRAR 122
           SH    S EE D NG +    KR       + G+     K   K   DP      HVRAR
Sbjct: 251 SHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRAR 310

Query: 123 RGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFL 182
           RGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 311 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 370

Query: 183 SMKLASLDPVLHDFGMD 196
           SMKLA+++P + DF ++
Sbjct: 371 SMKLATVNPQM-DFNLE 382

BLAST of CSPI01G00200 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-29
Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 1

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PS+ S     EE++ +  K          R K    +G K K +    +    HVRARRG
Sbjct: 216 PSAVSSSKEIEEKEDSDPK----------RCKKSEENGDKTKSI--DPYKDYIHVRARRG 275

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRR+KIS+RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSM
Sbjct: 276 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 335

Query: 181 KLASLDPVLHDFGMD 196
           KL+S++  L DF MD
Sbjct: 336 KLSSVNTRL-DFNMD 337

BLAST of CSPI01G00200 vs. TAIR10
Match: AT1G26260.1 (AT1G26260.1 cryptochrome-interacting basic-helix-loop-helix 5)

HSP 1 Score: 124.8 bits (312), Expect = 8.3e-29
Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1

Query: 114 HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQN 173
           H+RARRGQAT+SHSLAERVRR+KIS+RMK LQ LVPGC KVTGKA+MLDEIINYVQSLQ 
Sbjct: 222 HMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQC 281

Query: 174 QVEFLSMKLASLDPVLHDFGMD 196
           Q+EFLSMKL++++PVL DF ++
Sbjct: 282 QIEFLSMKLSAVNPVL-DFNLE 302

BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|778655231|ref|XP_004138026.2| (PREDICTED: transcription factor bHLH137-like [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 1.4e-155
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPRNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTP NYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120
           PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG
Sbjct: 61  PSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPADHVRARRG 120

Query: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180
           QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 121 QATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSM 180

Query: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240
           KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG
Sbjct: 181 KLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATG 240

Query: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS
Sbjct: 241 GGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 275

BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|659128812|ref|XP_008464382.1| (PREDICTED: transcription factor bHLH137-like [Cucumis melo])

HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-142
Identity = 257/276 (93.12%), Postives = 261/276 (94.57%), Query Frame = 1

Query: 1   MNSNACGWELLEETAPNLQTPRNYYHHLLPPQFQSAAASSSNYQTPQHHHSLAPDHHIYM 60
           MNSNACGWELLEETAPNLQTP NY HHLLPPQ QSA ASSSNYQTPQHHH L PDHHIYM
Sbjct: 1   MNSNACGWELLEETAPNLQTPHNYDHHLLPPQIQSAPASSSNYQTPQHHHPLGPDHHIYM 60

Query: 61  PSSHSHPPSAEEEDPNGSKGGECKRR-CYNRAKAGGRSGCKKKMMIKTQHDPADHVRARR 120
           PSSHSHPPSAEEED NGSKGGECKRR CYNRAKAG RSGCKKKM IKTQHDPADHVRARR
Sbjct: 61  PSSHSHPPSAEEEDQNGSKGGECKRRRCYNRAKAGERSGCKKKMTIKTQHDPADHVRARR 120

Query: 121 GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLS 180
           GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLS
Sbjct: 121 GQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLS 180

Query: 181 MKLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQAT 240
           MKLASL PVL+DFGMDFPEVL+VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQAT
Sbjct: 181 MKLASLHPVLYDFGMDFPEVLIVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQAT 240

Query: 241 GGGGGGSPILTPGNSSFINPSPLFLDHGNTSQLHLS 276
           G GGGGSPILTPGNSSFINPSPLF+DHGNTS LHLS
Sbjct: 241 GSGGGGSPILTPGNSSFINPSPLFIDHGNTSLLHLS 276

BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|307136009|gb|ADN33865.1| (bHLH transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 256.5 bits (654), Expect = 5.2e-65
Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1

Query: 141 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 200
           MKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLASL PVL+DFGMDFPEVL
Sbjct: 1   MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60

Query: 201 LVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGGGSPILTPGNSSFINPS 260
           +VGTPASEILNGNGMVSHSE AELA+NNMAPIYNTFQATG GGGGSPILTPGNSSFINPS
Sbjct: 61  IVGTPASEILNGNGMVSHSEQAELAHNNMAPIYNTFQATGSGGGGSPILTPGNSSFINPS 120

Query: 261 PLFLDHGNTSQLHLS 276
           PLF+DHGNTS LHLS
Sbjct: 121 PLFIDHGNTSLLHLS 135

BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|223550225|gb|EEF51712.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|1000984518|ref|XP_015578685.1| (PREDICTED: transcription factor bHLH137 [Ricinus communis])

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1

Query: 69  SAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKT--QHDPAD--HVRARRGQATD 128
           SA+ +D    +G + +++C N  K   +   +KK   K   Q  P    HVRARRGQATD
Sbjct: 123 SAQSKDARDGRGKK-QKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATD 182

Query: 129 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 188
           SHSLAERVRR+KIS+RMK+LQ LVPGC KVTGKALMLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 183 SHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 242

Query: 189 LDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPIYNTFQATGGGGG 248
           ++P+ +DFGMDF  +++     + + +   ++          ++ A    T  AT     
Sbjct: 243 VNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQCPPTTAFADSTATATTTTAAT----- 302

Query: 249 GSPILTPGNSSFINPSPLFL 265
            S  +T  N S ++ S  FL
Sbjct: 303 -STFVTANNYSLMDASAPFL 315

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH137_ARATH4.0e-3352.72Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1[more]
BH078_ARATH9.3e-3053.16Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1[more]
BH049_ARATH2.1e-2958.39Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1[more]
BH062_ARATH6.6e-2859.26Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1[more]
BH076_ARATH1.5e-2778.05Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LTX6_CUCSA9.9e-15699.64Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1[more]
E5GBM5_CUCME3.6e-6593.33BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9RA85_RICCO3.3e-3448.00DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1[more]
W9R5J1_9ROSA2.4e-3259.03Uncharacterized protein OS=Morus notabilis GN=L484_008847 PE=4 SV=1[more]
A0A0B5E953_CAPAN3.1e-3276.77Transcription factor Upa20 OS=Capsicum annuum GN=Upa20 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G50915.12.3e-3452.72 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G48560.15.2e-3153.16 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G68920.11.2e-3058.39 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G07340.13.7e-2959.26 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G26260.18.3e-2978.05 cryptochrome-interacting basic-helix-loop-helix 5[more]
Match NameE-valueIdentityDescription
gi|778655231|ref|XP_004138026.2|1.4e-15599.64PREDICTED: transcription factor bHLH137-like [Cucumis sativus][more]
gi|659128812|ref|XP_008464382.1|1.8e-14293.12PREDICTED: transcription factor bHLH137-like [Cucumis melo][more]
gi|307136009|gb|ADN33865.1|5.2e-6593.33bHLH transcription factor [Cucumis melo subsp. melo][more]
gi|223550225|gb|EEF51712.1|4.7e-3448.00DNA binding protein, putative [Ricinus communis][more]
gi|1000984518|ref|XP_015578685.1|4.7e-3448.00PREDICTED: transcription factor bHLH137 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G00200.1CSPI01G00200.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 121..187
score: 2.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 125..172
score: 7.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 127..177
score: 7.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 121..171
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 119..188
score: 1.14
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 114..195
score: 3.5
NoneNo IPR availablePANTHERPTHR12565:SF90TRANSCRIPTION FACTOR BHLH137coord: 114..195
score: 3.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G00200Cla019311Watermelon (97103) v1cpiwmB099
CSPI01G00200Cla002643Watermelon (97103) v1cpiwmB029
CSPI01G00200Csa1G000700Cucumber (Chinese Long) v2cpicuB000
CSPI01G00200Csa1G051740Cucumber (Chinese Long) v2cpicuB009
CSPI01G00200MELO3C002383Melon (DHL92) v3.5.1cpimeB015
CSPI01G00200MELO3C026173Melon (DHL92) v3.5.1cpimeB055
CSPI01G00200ClCG03G003990Watermelon (Charleston Gray)cpiwcgB053
CSPI01G00200ClCG06G018250Watermelon (Charleston Gray)cpiwcgB083
CSPI01G00200Lsi02G005250Bottle gourd (USVL1VR-Ls)cpilsiB041
CSPI01G00200Lsi06G016720Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G00200MELO3C026173.2Melon (DHL92) v3.6.1cpimedB049
CSPI01G00200MELO3C002383.2Melon (DHL92) v3.6.1cpimedB014
CSPI01G00200CsaV3_1G000190Cucumber (Chinese Long) v3cpicucB001
CSPI01G00200CsaV3_1G009880Cucumber (Chinese Long) v3cpicucB015
CSPI01G00200Cla97C03G055150Watermelon (97103) v2cpiwmbB051
CSPI01G00200Cla97C06G128010Watermelon (97103) v2cpiwmbB079
CSPI01G00200Bhi08G001255Wax gourdcpiwgoB061
CSPI01G00200Cucsa.157010Cucumber (Gy14) v1cgycpiB229
CSPI01G00200CmaCh13G008280Cucurbita maxima (Rimu)cmacpiB227
CSPI01G00200CmaCh10G000290Cucurbita maxima (Rimu)cmacpiB049
CSPI01G00200CmoCh18G002370Cucurbita moschata (Rifu)cmocpiB396
CSPI01G00200CmoCh13G008580Cucurbita moschata (Rifu)cmocpiB213
CSPI01G00200CmoCh10G000260Cucurbita moschata (Rifu)cmocpiB040
CSPI01G00200Cp4.1LG20g02900Cucurbita pepo (Zucchini)cpecpiB515
CSPI01G00200Cp4.1LG18g09440Cucurbita pepo (Zucchini)cpecpiB361
CSPI01G00200CsGy1G000190Cucumber (Gy14) v2cgybcpiB001
CSPI01G00200CsGy1G009850Cucumber (Gy14) v2cgybcpiB013
CSPI01G00200Carg10252Silver-seed gourdcarcpiB0396
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI01G00200CSPI01G09830Wild cucumber (PI 183967)cpicpiB003