CSPI01G00200 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTGGAGTTCAACTTGATTGGCGTTTTTATCCTTATGTATATAAATTAAACCAAGCTGAGGTTTGAGGTTTGTTCGGAGAGTAGTATATAGTTGTAGTTGTAGCTATTACACACACTGAAGAAGAAGAATATATAATCTTGACTCCCTTGCTGGCCTTTGCTCAAAAAATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGTACGTACTTACTATTTCTTATTCTCTTATATATATATTAATTATTCAACCCTTTTCAGTTTTATATTGTTGAGATTTTATTGATAATATTAATTCATTTCCCTGGTATATATATATATGGTTTGTAATTCAATTAATGTATATGTATACAGGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTAATTGAACTTAATTTAATATAATATAAACACGTACCACACACTTCCACCTTCTTCCTCATCTCTCTCTCTCATCTCTACCTCTACTTTTACTAGAAACTAAAATCATTATTGGAGTTTAATTTGTCAGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACCACCTAATGCTACCACTATTAAAATTTTCCCCATTCTCTCTTTACGTTCCAACAATAAATAATATTCCATTTTTATTATAAATTTCAATCTCTGATCCCTATAGCTAATTGATTTCAAAATTATATATAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAACCCCAATTCCTAATCATACCCATTTCACTCATTTAATTTTATTTATTTACTTCAAGTACTGGCCGGTACATACAAAAGTTTGTTGAATTTTGTTATTATTCCTCCTCACGAATTAATCATTAGTTACTCTCTCTGTATGTGTACTTAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGGTGCTGCTCTCTCTAAACAATTACATTATTTTTTATTAATTATCAATTATATATATTAGAGAGATCAGTATACACATTTAATTAACAGTTACCTGAAGAAGAAGAAGAAGAAAAAACTAAGTTAATTGAATTGAATTTGTTGCTTCAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGATTTCCTTATTTACACACAAAACAGAAAGAGATCAAAGACATCATATATAATTATTAATTAAATTTGAGTGGAGAGAGAACAGTGGATATGGTTCTATATATATGTATTTACATATCAACGACTGAACTCTCTTGATCTATAAATTCATATATACTTTATATATATACGTCCCATTAATTAACTATTGCGTGAATATGTGCAAGTCTTATCACTCCGTGAATCAGTGGGTATACATTACACCTCTGCAATAGTAAGCCAACTCTTGTGGAGTTGGGAAAAAGTACTGTTGTGGGACTGCAGTTTAATTTTTGTTTGTAAACAAATCGTAAATCATATATATTTATATATCGGTGGTTTTAATTGGC ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA ATGAATAGTAATGCGTGTGGTTGGGAATTATTAGAAGAAACGGCGCCAAACTTACAAACACCCCGTAATTATTATCACCACCTTCTTCCACCTCAATTCCAATCAGCAGCTGCTTCTTCCTCAAATTATCAAACTCCCCAGCACCACCACTCCCTCGCGCCTGATCATCACATATATATGCCTTCTTCTCATTCCCACCCTCCATCTGCCGAGGAGGAGGACCCAAATGGAAGTAAGGGGGGCGAGTGCAAGAGGAGATGTTACAACCGAGCAAAAGCAGGAGGAAGATCAGGCTGCAAGAAGAAGATGATGATCAAAACTCAACATGACCCTGCTGACCATGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGGTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACCCTTGTTCCTGGCTGCCACAAGGTAACTGGGAAGGCCTTAATGCTGGATGAAATTATTAACTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTTTCCATGAAGCTTGCTTCTCTTGACCCCGTCCTCCACGACTTTGGAATGGATTTTCCAGAAGTGTTGCTCGTCGGTACACCAGCCTCTGAGATATTGAATGGGAATGGCATGGTGTCACACTCAGAGCATGCAGAATTAGCATACAATAATATGGCACCAATATACAACACATTTCAGGCTACAGGAGGCGGAGGTGGTGGTAGCCCGATCTTAACGCCCGGAAACAGCAGCTTTATCAATCCATCTCCACTTTTCCTTGACCATGGGAATACTTCTCAGCTACATCTCTCATGA
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.0e-33 Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 1
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.3e-30 Identity = 84/158 (53.16%), Postives = 98/158 (62.03%), Query Frame = 1
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 80/137 (58.39%), Postives = 94/137 (68.61%), Query Frame = 1
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.6e-28 Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of CSPI01G00200 vs. Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27 Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1
BLAST of CSPI01G00200 vs. TrEMBL
Match: A0A0A0LTX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000700 PE=4 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 9.9e-156 Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1
BLAST of CSPI01G00200 vs. TrEMBL
Match: E5GBM5_CUCME (BHLH transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.6e-65 Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of CSPI01G00200 vs. TrEMBL
Match: B9RA85_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1504530 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
BLAST of CSPI01G00200 vs. TrEMBL
Match: W9R5J1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008847 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32 Identity = 85/144 (59.03%), Postives = 101/144 (70.14%), Query Frame = 1
BLAST of CSPI01G00200 vs. TrEMBL
Match: A0A0B5E953_CAPAN (Transcription factor Upa20 OS=Capsicum annuum GN=Upa20 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.1e-32 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 1
BLAST of CSPI01G00200 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34 Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 1
BLAST of CSPI01G00200 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31 Identity = 84/158 (53.16%), Postives = 98/158 (62.03%), Query Frame = 1
BLAST of CSPI01G00200 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30 Identity = 80/137 (58.39%), Postives = 94/137 (68.61%), Query Frame = 1
BLAST of CSPI01G00200 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 125.9 bits (315), Expect = 3.7e-29 Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of CSPI01G00200 vs. TAIR10
Match: AT1G26260.1 (AT1G26260.1 cryptochrome-interacting basic-helix-loop-helix 5) HSP 1 Score: 124.8 bits (312), Expect = 8.3e-29 Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1
BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|778655231|ref|XP_004138026.2| (PREDICTED: transcription factor bHLH137-like [Cucumis sativus]) HSP 1 Score: 557.4 bits (1435), Expect = 1.4e-155 Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1
BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|659128812|ref|XP_008464382.1| (PREDICTED: transcription factor bHLH137-like [Cucumis melo]) HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-142 Identity = 257/276 (93.12%), Postives = 261/276 (94.57%), Query Frame = 1
BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|307136009|gb|ADN33865.1| (bHLH transcription factor [Cucumis melo subsp. melo]) HSP 1 Score: 256.5 bits (654), Expect = 5.2e-65 Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|223550225|gb|EEF51712.1| (DNA binding protein, putative [Ricinus communis]) HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
BLAST of CSPI01G00200 vs. NCBI nr
Match: gi|1000984518|ref|XP_015578685.1| (PREDICTED: transcription factor bHLH137 [Ricinus communis]) HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34 Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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