CsGy7G015420 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G015420
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	rRNA-processing protein
Location	Chr7 : 19385862 .. 19389349 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGCGCCAGACTCAAGTTCTGGTCTTCGAGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTCTTTTTCAACTCTCTATTTTTTATTTCATATCAATCTTTTTAATGTGTAAATAATAATTTGAAACCAATTCTACTTCTTCGTTTTCTGACCTAATTCTTCTCACTTTCATTCAATCTCTCTGTCCAAACGATGAAGCATTCCAATGGAAAACACGAACATAACAATCGCTCCAAATCGAAATTCATGAACAACAATAAACACAATAATATTAAACGGTTGGGAGGGAAGGGCCTTTCGCTTGAGGCATTCGCGAATGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAGTATGGTTCTTCTTAACCTTTCCTTACTTTTTACTTCTTCTTCTTCTTTTTTTTTTTGGTCTTAATTATCGATTACTAGCCTTTTCGTTTACTCCTCACTTGTTCTTAGTTCTGTAGTATCTGGGTTTTGGGTTTTTTGTTTAGGATTTATGGGGATGAGAATGTTGTTTTTATTTCTTATTTTGGTGGAGAATTAAAAAATTGTACTTGTGGGGTTCGATTTCATGTTAGAGTTGGGGGATTACATTGCAAAATCTTGGAAATTGGGTATTGGAGACTGGAAGTGTATGGATTTCTTCTGGTGATATAATAGAACATTGAGGAAATAGTTTAAATTTTTCATTAAAAAATGTCGGGATGGATATGAGTGGTGTAAGCAACGAGATTTTTTAGTTTACAGGTTCACTGCGTACTTGTTTATAGTTATATAGAATCTAGATTTTAGATTTTGGGTTTCTTTAGTTGTTATGGGGATCAAAATGTTGTTTTAATTCCAATACTTTGGTTGTGAATGAAAATTTTGTATTCCTCAGTGTTCGATTTTGTGTTTAGAATTGGGGGATTACATTGCAAAATCTTGGAGATTGGATAGTGGAGACTGGAAATATGTGGATTTTTTTCTGGTGATGTAGTAGATTTATTAATTTTGTTGGTCTATGTTTAAGGTAGTGATTGACTCTCGTGTATGTATCTTTTGTTCAGAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGTTAGTAAAGCATCAGAATCAACCGAATGAGAGGCCTTCTAGCTCTACTGTTACCCTTGTCGAGGTATGACCATATTGATGGCTATCTAATATCACTTAAAGCTTAAATTATGCTTGTTAACTTGGTGAGTTGTGGACTCTTGCGATGCCTTTCCTTTTGTCGAATAAGATAATGGCATTGCAAAATATTGCATTAGATGATCTGTTGCAAGTTTTCATATATAGATAGAGGAGAGAGAAGAGCTTTGTTTTTTTTTTCTTTTTTGGTTATTGAAGTTATTTTTGGTCACTCTTAGTTTATTGTGATTGGATAGGCATTTAACCCTATGAGCATCTGTATTTCATTCTTGTTATTTAGAGAGAGAGAGAAGAACTTTGTTTCTTTTGTTTGGTGAAGTTTTTTAGGTCTCGGTCAGGATTGTTTCTTTTTGTTGAAGCGTCTGTCTCGTGAGGTGTTCAGAAAATCTCATGAATCTTACTTATACATTTTTTAGTAGGATTATATTATTGTTTGAGTTAGGTTAATTTGAATTAGGTAGGGTAGATTGGTTTATGAGTTTACTTGAAAATTAGTTTAGCAAATCAATCTGAATTTATTATTAGTTTTAAAACATATTTATTCTCCAACCACTTGTTAAAACATTTTACTTTTATTTTTTTGTTTCATAACATAGAATGTGTTGAGTTAACAATGTTGTTGAGGTGAGCCAAGGAGCTCACTTACTAGAGAAGTTATTTAAGGAGGTTGCTGGCATATGTGGCAGGCAGTCATTTGGGTGCTCACTGTCTAGAAAAACTATTCGAGAAGGCCACTACAATGTGGCTTATAGTTATTAGAGACCACTCATATTTTTTAATGTACATCCCGTTGTTATTAAATCGTGGCTACATAGTGGTCTCATTGAATGATTTTTTTTTCCCAACTAACACTTACCACCTAATGGCAAGGTCCTCGAAGTTATGATGCCATGGTGTGCCATCACCAATAGGCATGGTGAGTACCATGTTGAAGGCTGGCTTATTGGGCTTTCTCTAAGAATAAAAAATAGAGAAATCCATGTAGCCCACGGAACATAGAAAGGCTGTCTCACCTTATGGGGAGAGAAAAATAAGACGGGGAAAAAAGAAGGCTGGTCAGAAGAGAATCGGAAAAGGAAAAAAAAAAAAGTCAAAGATAAAATTCTAGTTTTTAATCTATTATTTATTAATTAATAACAATTTATTAGGTACTGCTGCATCATTTATTTGATTCCTATTGGTTTCCACTTGCCTTATTGGTGATTATGAGATTTGTCGCCATAAGATACATCGAGTACTTTTAGTATAGTGTGAGTTACTTATCTTAATCCGATGTTTGAGAATGTATAAATAGAGGTTTTGGAGATTAACATTTTACTCTCTTTTTGTTAAATCAAATTTTGTGCAAGTGACCTAAATAATCCTAAGAAAGTCTTCGCAAAAATTTCAGGGTTGGTTTGGACTGTTTTGTTTTTTTTATTGTGGTTGATGGTTGTTTTGTTGAAAAAGCTTACGATCCAAACAATTGGGTTTGATCTAAAAGATAATTCAATCTAATCCAGACCAACCTATGAATACCCTTTGCTAGTATCCGTTGATTATGATTTGGAGGGACATCGAACCTAATGAGTATTTCATTCCATTTCTGTTATGTAAAGAATCTGCTGTGCAAATGTGCTGCTTGACCTATAACCTGACTCACTTTCTTTCTGGTTTGTAAAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGATAGATGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAACATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGAAGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAAACTATTGGAGCCTCAACGAACCACTAAGGCCTTTTGTTGTTTTCACTGAATTTTGTAGAACTTTTTGTCCCTTTAGGAAATGTATATTATATTCTCGTGTACCTTTTAGTTTGCTTCATTATACAATCAAATTATTCCAGTGTATTACAATTTTTAGTCTAATCTAAATCATCCATTTGCTTAATATAATCATATTGCCGTCCATTTGCAAGTGTTTGGATGTAAGTTTTAAGCTTTTTATTGATTGTTCAATGGAAAAAGATCCCTTTCTCTAACAATTAGGTATTCAAACACATGGAGTCTTGTTGCAATGCAGTGAGTTGCATCAATAGTGTAGTTTAGATAATTAGAAAAAACATTATCGTG

mRNA sequence

AAGGCGCCAGACTCAAGTTCTGGTCTTCGAGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTCTTTTTCAACTCTCTATTTTTTATTTCATATCAATCTTTTTAATGTGTAAATAATAATTTGAAACCAATTCTACTTCTTCGTTTTCTGACCTAATTCTTCTCACTTTCATTCAATCTCTCTGTCCAAACGATGAAGCATTCCAATGGAAAACACGAACATAACAATCGCTCCAAATCGAAATTCATGAACAACAATAAACACAATAATATTAAACGGTTGGGAGGGAAGGGCCTTTCGCTTGAGGCATTCGCGAATGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGTTAGTAAAGCATCAGAATCAACCGAATGAGAGGCCTTCTAGCTCTACTGTTACCCTTGTCGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGATAGATGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAACATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGAAGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAAACTATTGGAGCCTCAACGAACCACTAAGGCCTTTTGTTGTTTTCACTGAATTTTGTAGAACTTTTTGTCCCTTTAGGAAATGTATATTATATTCTCGTGTACCTTTTAGTTTGCTTCATTATACAATCAAATTATTCCAGTGTATTACAATTTTTAGTCTAATCTAAATCATCCATTTGCTTAATATAATCATATTGCCGTCCATTTGCAAGTGTTTGGATGTAAGTTTTAAGCTTTTTATTGATTGTTCAATGGAAAAAGATCCCTTTCTCTAACAATTAGGTATTCAAACACATGGAGTCTTGTTGCAATGCAGTGAGTTGCATCAATAGTGTAGTTTAGATAATTAGAAAAAACATTATCGTG

Coding sequence (CDS)

ATGAAGCATTCCAATGGAAAACACGAACATAACAATCGCTCCAAATCGAAATTCATGAACAACAATAAACACAATAATATTAAACGGTTGGGAGGGAAGGGCCTTTCGCTTGAGGCATTCGCGAATGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGTTAGTAAAGCATCAGAATCAACCGAATGAGAGGCCTTCTAGCTCTACTGTTACCCTTGTCGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGATAGATGTGGGAAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAACATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGAAGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAAACTATTGGAGCCTCAACGAACCACTAA

Protein sequence

MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

Homology

[Close]

BLAST of CsGy7G015420 vs. NCBI nr
Match: XP_004136058.2 (PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hypothetical protein Csa_7G393990 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGASTNH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of CsGy7G015420 vs. NCBI nr
Match: XP_008451439.1 (PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 181/191 (94.76%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETKFENQTN RCGKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           QALYERKH XXXXXXXXXXXXXXXXXXXXXXXXXXX STREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGASTNH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of CsGy7G015420 vs. NCBI nr
Match: XP_022960530.1 (uncharacterized protein LOC111461241 [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 3.3e-62
Identity = 153/191 (80.10%), Postives = 158/191 (82.72%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+  GK E   RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQN  NERPSSS+V LVEGENE KFEN+TN R G ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH          X XXXXXXXXXXXXXXX  STREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKXAXXXXXXXXXXXXXXXRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASMNH 191

[Close]

BLAST of CsGy7G015420 vs. NCBI nr
Match: XP_023513566.1 (uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 163/191 (85.34%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+  GK E    SKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTCSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQN  NERPSSST+ LVEGENE KFENQTN R G ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSTLGLVEGENEMKFENQTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH  XXXXXXXXXXXXXXXXXXXXXXXXXX STREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEXXXXXXXXXXXXXXXXXXXXXXXXXXNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASVNH 191

[Close]

BLAST of CsGy7G015420 vs. NCBI nr
Match: XP_023004670.1 (uncharacterized protein LOC111497895 [Cucurbita maxima])

HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61
Identity = 151/191 (79.06%), Postives = 156/191 (81.68%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+  GK E   RSKSKF   NKH N+KRLGGKG S +AFANAKSTTDYYNPA IKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKHKNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQN  NERPS+STV LVEGENE KFEN+TN R G ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH          X XXXXXXXXXXXXXXX  STREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKXAXXXXXXXXXXXXXXXRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASMNH 191

[Close]

BLAST of CsGy7G015420 vs. TAIR10
Match: AT4G03180.1 (rRNA processing (InterPro:IPR013730))

HSP 1 Score: 101.7 bits (252), Expect = 5.2e-22
Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 3   HSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFY 62
           + N  HE     KSK     K  N++RLGG GLSL+ FAN KS  + YNP+LIKKQ+EFY
Sbjct: 5   YQNADHE---TDKSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFY 64

Query: 63  KNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSLQA 122
           KNAK+V+K++K +K QN P++  +  T  + +         ++N R G         ++ 
Sbjct: 65  KNAKYVSKFRKSLKQQNIPDKNETGETSKVGDXXXXXXXXGKSNKRIG---------VED 124

Query: 123 LYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEHLL 182
           LY++                XXXXXXXXXXXXXXX    KM ++T+ GQPVMKYRIEHLL
Sbjct: 125 LYKQTREEMERVRKEREAMFXXXXXXXXXXXXXXXXXXGKMLRKTRHGQPVMKYRIEHLL 178

Query: 183 ETIGAS 189
           E+I  S
Sbjct: 185 ESIKKS 178

[Close]

BLAST of CsGy7G015420 vs. TrEMBL
Match: tr|A0A0A0K7L3|A0A0A0K7L3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGASTNH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of CsGy7G015420 vs. TrEMBL
Match: tr|A0A1S3BRH3|A0A1S3BRH3_CUCME (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-74
Identity = 181/191 (94.76%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60
           MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120
           FYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETKFENQTN RCGKERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEH 180
           QALYERKH XXXXXXXXXXXXXXXXXXXXXXXXXXX STREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASTNH 192
           LLETIGASTNH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of CsGy7G015420 vs. TrEMBL
Match: tr|A0A0K9QK98|A0A0K9QK98_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_169700 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 99/179 (55.31%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 19  MNNNKHN-------NIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKY 78
           MNNN +N       N++RLGG GLSLEAFANAKS  + YNPAL+KK+REFY+NAKHVNKY
Sbjct: 1   MNNNNYNNKNKMKKNMQRLGGTGLSLEAFANAKSRQNSYNPALLKKKREFYRNAKHVNKY 60

Query: 79  KKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSLQALYERKHXXX 138
           KKL+K QNQPN++  S     V   NE++   +T+    K R KG  SLQ LY +KH   
Sbjct: 61  KKLLKQQNQPNDQSISVEPDEV---NESRVTGETSKEDKKSR-KGSYSLQDLYVKKHEEQ 120

Query: 139 XXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEHLLETIGASTN 191
                           XXXXXXXXX   REKMFKRT+KGQPVMKYRIE +LET+  ST+
Sbjct: 121 EKARMERDSFFKARKEXXXXXXXXXKDLREKMFKRTRKGQPVMKYRIEQILETLQGSTS 175

[Close]

BLAST of CsGy7G015420 vs. TrEMBL
Match: tr|A0A2I4FE46|A0A2I4FE46_9ROSI (uncharacterized protein LOC108997981 OS=Juglans regia OX=51240 GN=LOC108997981 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-31
Identity = 113/175 (64.57%), Postives = 137/175 (78.29%), Query Frame = 0


Query: 17  KFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVK 76
           K  NN K  NI+RLGG GLSLEAFANAKST+++YNPALIKKQ+EFYKNAK+V KYK+L+K
Sbjct: 22  KMQNNRKKKNIQRLGGGGLSLEAFANAKSTSNFYNPALIKKQQEFYKNAKYVKKYKRLLK 81

Query: 77  HQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSLQALYERKHXXXXXXXX 136
            Q+  ++  +SS++  +E E ET+       +    +N  +PSL+ LYE+KHXXXXXXXX
Sbjct: 82  QQSLKHD--TSSSINPLEDEIETEDGRIMRRKNKNSKNNSIPSLKELYEKKHXXXXXXXX 141

Query: 137 XXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH 192
           XXXXXXXXXXXXXXXXXXXXX    KMFK+T+ GQPVMKYRIEHLLETI  ST +
Sbjct: 142 XXXXXXXXXXXXXXXXXXXXXXXXXKMFKKTRAGQPVMKYRIEHLLETIQNSTKN 194

[Close]

BLAST of CsGy7G015420 vs. TrEMBL
Match: tr|A0A0J8E1H5|A0A0J8E1H5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_7g180030 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 109/190 (57.37%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 1   MKHSNGKHE--HNNRSKSKFMNNNKH---NNIKRLGGKGLSLEAFANAKSTTDYYNPALI 60
           MK  N + +  HN   +   ++NNK     N++RLGG GLSLEAFANAKS  + YNPAL+
Sbjct: 1   MKSRNWRDDGSHNREGRVPEVSNNKKKKMKNMQRLGGAGLSLEAFANAKSRNNAYNPALL 60

Query: 61  KKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNK 120
           KK+REFYKNAKHVNKYKKL+K Q+QPN++ S           E   EN  N        K
Sbjct: 61  KKKREFYKNAKHVNKYKKLLKQQSQPNDQDSVEPA-------EISKENXXN-------RK 120

Query: 121 GVPSLQALYERKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTREKMFKRTQKGQPVMK 180
           G  SL+ LY +KH          XXXXXXXXXXXXXXXXXXX  REKMFKRT++GQPVMK
Sbjct: 121 GSYSLRDLYVKKHEEQEKARMERXXXXXXXXXXXXXXXXXXXDLREKMFKRTRRGQPVMK 176

Query: 181 YRIEHLLETI 186
           YRIEHLLETI
Sbjct: 181 YRIEHLLETI 176

The following BLAST results are available for this feature:

BLAST of CsGy7G015420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136058.2	2.0e-80	100.00	PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hy...	[more]
XP_008451439.1	2.2e-74	94.76	PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]	[more]
XP_022960530.1	3.3e-62	80.10	uncharacterized protein LOC111461241 [Cucurbita moschata]	[more]
XP_023513566.1	5.5e-62	85.34	uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo]	[more]
XP_023004670.1	2.1e-61	79.06	uncharacterized protein LOC111497895 [Cucurbita maxima]	[more]

BLAST of CsGy7G015420 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03180.1	5.2e-22	44.62	rRNA processing (InterPro:IPR013730)	[more]

BLAST of CsGy7G015420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G015420 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7L3\|A0A0A0K7L3_CUCSA	1.3e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1	[more]
tr\|A0A1S3BRH3\|A0A1S3BRH3_CUCME	1.4e-74	94.76	uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=...	[more]
tr\|A0A0K9QK98\|A0A0K9QK98_SPIOL	1.5e-31	55.31	Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_169700 PE=4 SV=1	[more]
tr\|A0A2I4FE46\|A0A2I4FE46_9ROSI	5.7e-31	64.57	uncharacterized protein LOC108997981 OS=Juglans regia OX=51240 GN=LOC108997981 P...	[more]
tr\|A0A0J8E1H5\|A0A0J8E1H5_BETVU	1.0e-27	57.37	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_7g18003...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013730	Fyv7/TAP26

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G015420.1	CsGy7G015420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..168
IPR013730	Fyv7/TAP26	PFAM	PF08524	rRNA_processing	coord: 55..185 e-value: 4.2E-13 score: 49.5
IPR013730	Fyv7/TAP26	PANTHER	PTHR15657	UNCHARACTERIZED	coord: 1..188

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G015420	Cla014700	Watermelon (97103) v1	cgybwmB530
CsGy7G015420	Csa7G393990	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G015420	MELO3C015900	Melon (DHL92) v3.5.1	cgybmeB458
CsGy7G015420	ClCG09G006430	Watermelon (Charleston Gray)	cgybwcgB486
CsGy7G015420	CSPI07G16960	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G015420	CmaCh17G011280	Cucurbita maxima (Rimu)	cgybcmaB925
CsGy7G015420	CmaCh08G003900	Cucurbita maxima (Rimu)	cgybcmaB973
CsGy7G015420	CmoCh17G011020	Cucurbita moschata (Rifu)	cgybcmoB909
CsGy7G015420	CmoCh08G003840	Cucurbita moschata (Rifu)	cgybcmoB955
CsGy7G015420	Lsi02G023530	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G015420	Cp4.1LG17g06950	Cucurbita pepo (Zucchini)	cgybcpeB931
CsGy7G015420	Cp4.1LG12g05360	Cucurbita pepo (Zucchini)	cgybcpeB906
CsGy7G015420	MELO3C015900.2	Melon (DHL92) v3.6.1	cgybmedB463
CsGy7G015420	CsaV3_7G028720	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G015420	Cla97C09G168960	Watermelon (97103) v2	cgybwmbB543
CsGy7G015420	BhiUN245G6	Wax gourd	cgybwgoB622
CsGy7G015420	Carg07206	Silver-seed gourd	carcgybB0120
CsGy7G015420	Carg22164	Silver-seed gourd	carcgybB0850

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G015420	Cucurbita maxima (Rimu)	cgybcmaB971
CsGy7G015420	Cucurbita pepo (Zucchini)	cgybcpeB989
CsGy7G015420	Watermelon (97103) v1	cgybwmB576