Cp4.1LG12g05360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRrna-processing fyv7
LocationCp4.1LG12 : 8173884 .. 8177220 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGGATATTAAAAAATAATTTATTTCCTCGTCTTCGCATCTGTTTCGCTTTCCTTCTCCGTTTTGCCCTAATTGCTTTCAATTTCATTCAATCTGTAAATTTTGTGCTTTTTACGACAATGAAGAAGCGTACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAGTATGATACTGCTTAATCTTGGTTGCGTTTACTTCTTTTTGATTTTTTATCATCGCCTTAAGTTTGCTGCTCACTTGTTGATAGTTCTGTGAAATCTAGGTTTTGAATTTTTGTTTAGCTGTTATGGACCTCGAAATGTTGTTGCAAAACCAAATTTGTAGAGAGAAATTCGTATTCACCGGTGTTTGATTTCGTGTTTCGAATTGGGGAATTACATTGCAAAAACTGGTTTAATGGTTTGCTTTAGGAAATTGGATATTGGATGGTCTTTGTTTATGGTAGTGATTGATTCTCGTGTATGTATTTGTGTTCAGAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATATGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGTATGACCTGTTTATGAGTATCTAATATCGCATAAAAGTTCAATTATGTTTATTTGTCTTCAATGCTTGGTGAGTTTTGAGACTCTTGAGATGCCTTTATTTATGTCGAATGAGAAAATGGTATTGCAAAATATTGCATAAGATAAGATGATCTGTTGCAAGTTTTCCTACAAAGAGAGAGAGATGAAAGCTTTATTTCATTTTGGTTATTGAAGTTATTTTCGGTCACTATTTGTTGGTTGTGATTTGGATAAGCAATCAACCCAATGGGCATCTATTTCATTTCATTCTTGTTATTCAAAGAGACAGAGAGGAACTTTGTTTCTTTTTGTTTGTTGAAGTTATTCTAGGCGCCTCTCTCACTATTTGTTTATTGTGATTTGAGTAGACATCGAACCCAATGCCCATCCATTTCATTCGCTTCTTGTTATCGAGAGAGAGAGAGTGGAGCTTTGATTCCTTTTGTTTATTGAAGTGCCTGTCACTTTAGGTATTCAGAAAACTCAATGAACCCTACCCTTACAGTTTTCTAGTCGAGTTATATTATGTTTGAGTTGAGTTCGGTAATTAAACGTATAGGTTGGACTGGTTTATGGGTTTACTTCAACTTAGTTTAGTCGAATTCAATCAACCGAAGTTTATTATTGATTTAAAATACACTTATTCTTCAACAACTTTTAAAAATACTCGGGGAGGCAGCACTTGAAGTTATTAGAGTGCTCACTAACTGGAGCAACTATTGGAGGAGGCCGCTATAATGTGACTAATAATTATTTAGGGGTCATCCAGTGTGATGTCCCACATTGGTTGGGGACGAGAACAAACCACCATTTATACGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGTCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCTTTGGGCCTGGGTTGTTACAAATGGTATCAGAGCCAGACACCAAACGATGTGTCAACTTTCTCGCTGTTCCCCAAAGGGGGGTAGACACGAGGTGGTGTGCTAGTAAGGACGCTGGGCCCCAAAGGGGGGTGGATTTTGGGGGCAGTCCCTCATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCTGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACTATTTATAAGGGTGTGGAAACCTTCTCCTAGTAGACGCGTTTTAAAGCCCGGAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGTTGTTACATCCAGATTTCTGGTCTACATCCGATGAAAAACGGTCACATTGCGGTGGTGGTGCTTGAACAATTTTTTCCTTAACGGCCCTTACCACCTAATGGCGAGGTTCTTGAAGTGAACATGAGGCCATGGTGCACCATCACCAAAAGGCAAGGAGAGTACCATGTTGATGGCTGCCTTAATGGACTTTTTCCAGTAATAATAAATCTTTGGTATCCCACAGAACATTAAAGGTTGTCTCACCTTATGGGCAGAGAAAAATAAGAAGGGGGAAGAAGAAGGCAGGTCGGAAGAGAAGCACAATAATTATTGAAATTCCAACTGCCATGCTAGCGTTTAAGAACATGCAACTATTGCTTGTTGCATTTAATTTTTCTCCTTCAGCCCTTTTATTTTTTATTTTTCTAAAATATCTTTACCTTTATTCATTATTTAAAATGATTTTTATTTACATATTAAATGATTTTGTTAATATTTTTTCACATTTAAAATTCTATTTTTTCAAATCCATTATTTATTGATTTATTTAATGCACCTGCTTCATTTAGTTTATTCTTTTTGGTTGCTTCTTGACTTAAGTTTATCAGGAGACTTGAGATATCTCTCGTAGTTTGAATATAGTGTGACTTACTAATCTCGAATCGTTTCGTTGGATTTAAAAGATATTCTCTATTCCGTCCAACCCAACCTATGAATACCGCTTTCTATCACTATTTGTTGATTGAGGTTTGGAGAGACATCGAACCCAACCGGCATCTGTTTCATTCCCTTCCTGTTATGATAAGAATCTTCTGTGTATAGAATGTGCTGCTTGAACTATTAACGGACTCGATTTCTTGCTGGTTCTTAAAGGGTGAAAATGGAACAAAATTGGAGAATCAGACGAACGGTCGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACGCCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGATGAGGCCTTTGGTTGTTTTGACTGGACTTTGTGGAAGAAGCTTTTGTCTGCCTTAGGATGTATATTTCCTTGTGCCTTTTAGTTTACTTCATTACATTTATAATCTAATCTAAATGATCCATATGCATTATACTATTGTATTGCCGTCCCTTTGTAAGTGCTTGGATGCAAGTTTCTTAGCTTTTA

mRNA sequence

TATTGGATATTAAAAAATAATTTATTTCCTCGTCTTCGCATCTGTTTCGCTTTCCTTCTCCGTTTTGCCCTAATTGCTTTCAATTTCATTCAATCTGTAAATTTTGTGCTTTTTACGACAATGAAGAAGCGTACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATATGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACAAAATTGGAGAATCAGACGAACGGTCGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACGCCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGATGAGGCCTTTGGTTGTTTTGACTGGACTTTGTGGAAGAAGCTTTTGTCTGCCTTAGGATGTATATTTCCTTGTGCCTTTTAGTTTACTTCATTACATTTATAATCTAATCTAAATGATCCATATGCATTATACTATTGTATTGCCGTCCCTTTGTAAGTGCTTGGATGCAAGTTTCTTAGCTTTTA

Coding sequence (CDS)

ATGAAGAAGCGTACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATATGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACAAAATTGGAGAATCAGACGAACGGTCGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACGCCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGA

Protein sequence

MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEHLLKTIGASMNQ
Homology
[Close]
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match: A0A0A0K7L3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-75
Identity = 160/190 (84.21%), Postives = 167/190 (87.89%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E  NR KS FM N KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KY KLVKHQN  NERPSSSTV LVEGEN TK ENQTN R GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match: B9S3W1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0556030 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-41
Identity = 106/186 (56.99%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 3   KRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFY 62
           K  G++E  N  KS  MK KK KNM RLGG+GLSLE FAN KS++ +YNPA+IKKQREFY
Sbjct: 8   KDEGKNEKFNGTKSMDMKKKKKKNMMRLGGQGLSLEVFANAKSSSSHYNPAVIKKQREFY 67

Query: 63  KNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQE 122
           KNAK+VSK+ K +K Q    +  SS+   L E ++    E++   ++ K++  G  SL+E
Sbjct: 68  KNAKYVSKFKKKIKQQQSQPDNLSSAVKSL-EDKDDESGEDRNMVKKNKKKKNGSHSLRE 127

Query: 123 LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEHLL 182
           LYE++H+EKEKAR E+EAII AKKEE+E+A+A R A REKM K+T+ GQPVMKYRIEHLL
Sbjct: 128 LYEKQHQEKEKARTEREAIIKAKKEEREKAEAHRKAEREKMFKKTRHGQPVMKYRIEHLL 187

Query: 183 KTIGAS 189
           +TI  S
Sbjct: 188 QTIQGS 192

[Close]
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match: A0A0B2R2H4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038858 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+ KLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR A REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

[Close]
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match: I1JQH0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G209500 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+ KLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR A REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

[Close]
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match: A0A0B2SGZ8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002132 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-38
Identity = 107/188 (56.91%), Postives = 137/188 (72.87%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK    D+V++  +   M  KK  N+ RLGG GLSL+AFAN KS  + YNPA+IKKQRE
Sbjct: 1   MKKN---DKVRSDKQKQIMTKKK--NISRLGGSGLSLDAFANAKSKNNLYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+ KLVK QN  N+   S    L E  N T+ EN+    R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQND--PSLAQRLKENVNETE-ENKDKSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK RMEKEA++  KKE++E+A+A+R A REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKERMEKEAVLRVKKEDREQAEAQRKAMREKMLKKTRKGQPVMKYRIEH 179

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 179

[Close]
BLAST of Cp4.1LG12g05360 vs. TAIR10
Match: AT4G03180.1 (AT4G03180.1 rRNA processing (InterPro:IPR013730))

HSP 1 Score: 137.5 bits (345), Expect = 8.6e-33
Identity = 83/174 (47.70%), Postives = 120/174 (68.97%), Query Frame = 1 

Query: 15  KSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFYKNAKHVSKYMKL 74
           KS   + KK KNM+RLGG GLSL+ FAN+KS  + YNP+LIKKQ+EFYKNAK+VSK+ K 
Sbjct: 14  KSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKS 73

Query: 75  VKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQELYERKHEEKEKA 134
           +K QN  ++  +  T  + + ++  K + ++N R G         +++LY++  EE E+ 
Sbjct: 74  LKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIG---------VEDLYKQTREEMERV 133

Query: 135 RMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEHLLKTIGAS 189
           R E+EA+  AKKE +E A++RR   + KML++T+ GQPVMKYRIEHLL++I  S
Sbjct: 134 RKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKKS 178

[Close]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match: gi|659101125|ref|XP_008451439.1| (PREDICTED: rRNA-processing protein fyv7 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 160/190 (84.21%), Postives = 168/190 (88.42%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E +NR KS FM   KH N+KRLGGK LSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KY KLVKHQN  NERPSSSTVGLVEGEN TK ENQTNGR GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match: gi|778727886|ref|XP_004136058.2| (PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 160/190 (84.21%), Postives = 167/190 (87.89%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E  NR KS FM N KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KY KLVKHQN  NERPSSSTV LVEGEN TK ENQTN R GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match: gi|255559320|ref|XP_002520680.1| (PREDICTED: rRNA-processing protein FYV7 [Ricinus communis])

HSP 1 Score: 175.6 bits (444), Expect = 8.1e-41
Identity = 106/186 (56.99%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 3   KRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFY 62
           K  G++E  N  KS  MK KK KNM RLGG+GLSLE FAN KS++ +YNPA+IKKQREFY
Sbjct: 8   KDEGKNEKFNGTKSMDMKKKKKKNMMRLGGQGLSLEVFANAKSSSSHYNPAVIKKQREFY 67

Query: 63  KNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQE 122
           KNAK+VSK+ K +K Q    +  SS+   L E ++    E++   ++ K++  G  SL+E
Sbjct: 68  KNAKYVSKFKKKIKQQQSQPDNLSSAVKSL-EDKDDESGEDRNMVKKNKKKKNGSHSLRE 127

Query: 123 LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEHLL 182
           LYE++H+EKEKAR E+EAII AKKEE+E+A+A R A REKM K+T+ GQPVMKYRIEHLL
Sbjct: 128 LYEKQHQEKEKARTEREAIIKAKKEEREKAEAHRKAEREKMFKKTRHGQPVMKYRIEHLL 187

Query: 183 KTIGAS 189
           +TI  S
Sbjct: 188 QTIQGS 192

[Close]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match: gi|802688469|ref|XP_012082667.1| (PREDICTED: stress response protein nst1-like [Jatropha curcas])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 112/192 (58.33%), Postives = 139/192 (72.40%), Query Frame = 1 

Query: 1   MKKRT-GEDEVQNRPK---SAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIK 60
           MK R+ G+DE +N+ K   SA +  KK KNM RLGG  LSLEAFAN KST + YNPALIK
Sbjct: 1   MKNRSLGKDE-ENKTKINSSASISMKKKKNMMRLGGPALSLEAFANAKSTRNKYNPALIK 60

Query: 61  KQREFYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKG 120
           KQREFYKNAK+VSK+ K ++ QN   E  +SS V  +E  N T  E+    ++   + KG
Sbjct: 61  KQREFYKNAKYVSKFKKKLRQQNQQTE--TSSVVTNLEDNNETG-ESSEIIKKNNNKKKG 120

Query: 121 IPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKY 180
             SL++LYE++HEEKEKAR E+EA I AK EE+E+A+ARR A REKM K+T+ GQPVMKY
Sbjct: 121 SYSLKKLYEKQHEEKEKARTEREAFIKAKNEEREKAEARRKAEREKMFKKTRHGQPVMKY 180

Query: 181 RIEHLLKTIGAS 189
           RIEHLL+TI  S
Sbjct: 181 RIEHLLQTIQGS 188

[Close]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match: gi|356505508|ref|XP_003521532.1| (PREDICTED: stress response protein NST1-like [Glycine max])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+ KLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR A REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g05360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L3_CUCSA1.6e-7584.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393990 PE=4 SV=1[more]
B9S3W1_RICCO5.6e-4156.99Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0556030 PE=4 SV=1[more]
A0A0B2R2H4_GLYSO2.0e-3856.38Uncharacterized protein OS=Glycine soja GN=glysoja_038858 PE=4 SV=1[more]
I1JQH0_SOYBN2.0e-3856.38Uncharacterized protein OS=Glycine max GN=GLYMA_03G209500 PE=4 SV=1[more]
A0A0B2SGZ8_GLYSO2.6e-3856.91Uncharacterized protein OS=Glycine soja GN=glysoja_002132 PE=4 SV=1[more]
BLAST of Cp4.1LG12g05360 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03180.18.6e-3347.70 rRNA processing (InterPro:IPR013730)[more]
BLAST of Cp4.1LG12g05360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101125|ref|XP_008451439.1|4.5e-7684.21PREDICTED: rRNA-processing protein fyv7 [Cucumis melo][more]
gi|778727886|ref|XP_004136058.2|2.2e-7584.21PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus][more]
gi|255559320|ref|XP_002520680.1|8.1e-4156.99PREDICTED: rRNA-processing protein FYV7 [Ricinus communis][more]
gi|802688469|ref|XP_012082667.1|2.9e-3858.33PREDICTED: stress response protein nst1-like [Jatropha curcas][more]
gi|356505508|ref|XP_003521532.1|2.9e-3856.38PREDICTED: stress response protein NST1-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013730Fyv7/TAP26
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05360.1Cp4.1LG12g05360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013730Fyv7/TAP26PANTHERPTHR15657UNCHARACTERIZEDcoord: 1..191
score: 2.4
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 55..185
score: 1.5
NoneNo IPR availableunknownCoilCoilcoord: 120..164
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05360Cucsa.025180Cucumber (Gy14) v1cgycpeB0983
Cp4.1LG12g05360CmaCh17G011280Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05360CmaCh08G003900Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05360CmoCh08G003840Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05360CmoCh17G011020Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05360Cla014700Watermelon (97103) v1cpewmB131
Cp4.1LG12g05360Csa7G393990Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05360MELO3C015900Melon (DHL92) v3.5.1cpemeB124
Cp4.1LG12g05360ClCG09G006430Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05360CSPI07G16960Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05360Lsi02G023530Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05360MELO3C015900.2Melon (DHL92) v3.6.1cpemedB151
Cp4.1LG12g05360CsaV3_7G028720Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05360BhiUN245G6Wax gourdcpewgoB0187
Cp4.1LG12g05360CsGy7G015420Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05360Carg22164Silver-seed gourdcarcpeB1198
Cp4.1LG12g05360Carg07206Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g05360Cp4.1LG17g06950Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05360Melon (DHL92) v3.6.1cpemedB143
Cp4.1LG12g05360Silver-seed gourdcarcpeB1199
Cp4.1LG12g05360Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05360Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05360Cucurbita moschata (Rifu)cmocpeB336
Cp4.1LG12g05360Watermelon (97103) v1cpewmB160