CmoCh17G011020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G011020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRrna-processing fyv7
LocationCmo_Chr17 : 9059994 .. 9062991 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCCTTCTCCGTTTTGCCCTAATTGCTTTCAATTTCATTCAATCTGTAAATTTTGTGCTTTTTACGACAATGAAGAAGCGCACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAGTATGATACTGCTCAATCTGGGTTGCGTTTACTTCTTTTTGATTTTTTATCATCGCCTTAAGTTTGCTGCTCACTTGTTGATAGATCTGTGAAATCTAGGTTGTGAATTTTTGTTTAGCTGTTATGGACCTCGAAATGTTGTTGCAAAACCACTGTTTTTGTTGGAGAATGGAATTTGTAGAGAGAAATTCGTATTCTCCGGTGTTTGATTTCGTGTTTCGAATTGGGGAATTACATTGCAAAAACTGGTTTAATGGTTTGCTTTAGGAGATTGGATATTGGATGGTCTTTGTTTATGGTAGTGATTGATTCTCGTGTATGTATTTATGTTCAGAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGTATGACCTGTTTTATGAGTATCTAATATCGCGTAAAAGTTCAATTATGTTCATTTGCCTTCAATGCTTGGTGAGTTTTGAGACTCTTGAGATGCCTTTAGTTATGTTGAATGAGAAAATGGTATTGCAAACTATTGCATAAGATAAGATGATCTGTTGCAAGTTTTCCTACAAAGAGAGAGAGACGAGAGCTTTGTTTCATTTTGGTTATTGAAGTTATTTTCGGTCACTATTTGTTGGTTGTGATTTGGATAAGCAATCAACCCAATGGGTATCTATTTCATTTCATTCTTGTTATTCAAAGAGACAGAGAGGAACTTTGTTTCTTTTTGTTTGTTGAAGTTATTCTAGGTGCCTCTGTCACTATTTGTTTATTGTGATTTGAGTAGACATCGAACCCAACGCCCATCCATTTCATTCGCTTCTTATTATCGAGAGAGAGAGAGTGGAGCTTTGATTCCTTTTGTTTATTGAAGTGCCTGTCACTTTAGGCATTCAGAAAACTCAATGAACCCTACCCTTACAGTTTTTTAGTCGAGTTATATTATGTTTGAGTTGAGTTCGGTAATTAAACGTATAGGTTGGACTGGTTTATGGGTTTACTTCAACTTAGTTTAGTCGAATCCAATCAACCGAAGTTTATTATTGATTTAAAATACACTTGTTCTTCAACAACTTTTAAAAATACTCGGGGAGGCAGCACTTGAAGTTATTAGAGTGCTCACTAACTGGAGCAAATATTCGAGGAGGCCGCTATAATGTGACTAATAGTTATTTAGGGGTCATCCAGTCTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGAGTGTAGAAACCTTCCCCTAGCAAACGCGTTTTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCCTGGGTTGTTACATCCAGATTTTTGGTCTACATCCGATGAAAAACAGTCACATTGTGGTGGTGGTGGTTGAACAATTTTTTCCTTAACGGCCCTTACCACCTAATGGCGAGGTTCTTGAAGTGAACATGAAGCCATGGTGCACCATCGCCAAAAGGCAAGGAGAGTACCATGTTGATGGCTGCCTTAATGGACTTTTTCCAGTCACAATAAATCCTTGGTAGCCCACAGAAACATTAAAGGTTGTCTCACCTTATGGGCAGAGAAAAATAAGAAGGGGGAAGAAGAAGGCAGGTCGGAAGAGAAGCACAATAATTATTGAAATTCCAACTGCCACGCTAGCGTTTAAGAACATGCAGCTATTGCTTGTTGCATTTAATTTTTCTCCTTCAGCCCTTTTATTTTTTATTTTTCTAAAATATCTTTACCTTTATTCATTATTTAAAATGATTTTGTTAATATTTTTCACAATTTGAAATTCTATTTTTTTAAATCTATTATTTATTGATTTATTTAATGCACCTGCTTCATTTAGTTTATTCTTTTTGGTTGCCTCTTGACTTAAGTTTATCAGGAGACTTGAGATATCTCTCGTAGTTTGAATATAGTGCGACTTACTAATCTCGAATCGTTGCGTTGGATCTAAAAGATATTCTCTATCCCGTCCAACCCAACCTATGAATACCGCTTTCTATCACTATTTGTTGATTGGGGTTTGGAGAGACATCGAACCCAACCGGCATCTGTTTCATTCCCTTCCTGTTATGATAAGAATCTTGTGTGTATAGAATGTGCTGCTTGAACTATTAACCGACTCGCTTTCTTGCTGGTTCTTAAAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGATGAGGCCTTTGGTTGTTTTGGCTGGACTTGGTGGAAAAAGCTTTTGTCTGCTTTAGGATGTAATGAATTACATTTATAATCTAATCTAAATGATCCATATGCATTACACTATTGTATTGCCGTCCCTTTGTAAGTGCTTGGATGCAAGTTTCTTAGCTTTTAGTTGAATTTAAAATGGTCAATGTAACACCCGCGAGTAGATATTGTCTATTTTGGCCTGTTATATATCACCATCAGCCTCATGG

mRNA sequence

CTTTCCTTCTCCGTTTTGCCCTAATTGCTTTCAATTTCATTCAATCTGTAAATTTTGTGCTTTTTACGACAATGAAGAAGCGCACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGATGAGGCCTTTGGTTGTTTTGGCTGGACTTGGTGGAAAAAGCTTTTGTCTGCTTTAGGATGTAATGAATTACATTTATAATCTAATCTAAATGATCCATATGCATTACACTATTGTATTGCCGTCCCTTTGTAAGTGCTTGGATGCAAGTTTCTTAGCTTTTAGTTGAATTTAAAATGGTCAATGTAACACCCGCGAGTAGATATTGTCTATTTTGGCCTGTTATATATCACCATCAGCCTCATGG

Coding sequence (CDS)

ATGAAGAAGCGCACTGGGGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGAAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGA
Homology
[Close]
BLAST of CmoCh17G011020 vs. TrEMBL
Match: A0A0A0K7L3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.4e-76
Identity = 161/190 (84.74%), Postives = 168/190 (88.42%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E  NR KS FM N KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN  NERPSSSTV LVEGEN TK ENQTN R GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of CmoCh17G011020 vs. TrEMBL
Match: B9S3W1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0556030 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-41
Identity = 106/186 (56.99%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 3   KRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFY 62
           K  G++E  N  KS  MK KK KNM RLGG+GLSLE FAN KS++ +YNPA+IKKQREFY
Sbjct: 8   KDEGKNEKFNGTKSMDMKKKKKKNMMRLGGQGLSLEVFANAKSSSSHYNPAVIKKQREFY 67

Query: 63  KNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQE 122
           KNAK+VSK+KK +K Q    +  SS+   L E ++    E++   ++ K++  G  SL+E
Sbjct: 68  KNAKYVSKFKKKIKQQQSQPDNLSSAVKSL-EDKDDESGEDRNMVKKNKKKKNGSHSLRE 127

Query: 123 LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEHLL 182
           LYE++H+EKEKAR E+EAII AKKEE+E+A+A R   REKM K+T+ GQPVMKYRIEHLL
Sbjct: 128 LYEKQHQEKEKARTEREAIIKAKKEEREKAEAHRKAEREKMFKKTRHGQPVMKYRIEHLL 187

Query: 183 KTIGAS 189
           +TI  S
Sbjct: 188 QTIQGS 192

[Close]
BLAST of CmoCh17G011020 vs. TrEMBL
Match: A0A0B2R2H4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038858 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+KKLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR   REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

[Close]
BLAST of CmoCh17G011020 vs. TrEMBL
Match: I1JQH0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G209500 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+KKLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR   REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

[Close]
BLAST of CmoCh17G011020 vs. TrEMBL
Match: A0A0B2SGZ8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002132 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-38
Identity = 107/188 (56.91%), Postives = 137/188 (72.87%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK    D+V++  +   M  KK  N+ RLGG GLSL+AFAN KS  + YNPA+IKKQRE
Sbjct: 1   MKKN---DKVRSDKQKQIMTKKK--NISRLGGSGLSLDAFANAKSKNNLYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+KKLVK QN  N+   S    L E  N T+ EN+    R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQND--PSLAQRLKENVNETE-ENKDKSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK RMEKEA++  KKE++E+A+A+R   REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKERMEKEAVLRVKKEDREQAEAQRKAMREKMLKKTRKGQPVMKYRIEH 179

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 179

[Close]
BLAST of CmoCh17G011020 vs. TAIR10
Match: AT4G03180.1 (AT4G03180.1 rRNA processing (InterPro:IPR013730))

HSP 1 Score: 138.3 bits (347), Expect = 5.0e-33
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 1 

Query: 15  KSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFYKNAKHVSKYKKL 74
           KS   + KK KNM+RLGG GLSL+ FAN+KS  + YNP+LIKKQ+EFYKNAK+VSK++K 
Sbjct: 14  KSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKS 73

Query: 75  VKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQELYERKHEEKEKA 134
           +K QN  ++  +  T  + + ++  K + ++N R G         +++LY++  EE E+ 
Sbjct: 74  LKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIG---------VEDLYKQTREEMERV 133

Query: 135 RMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEHLLKTIGAS 189
           R E+EA+  AKKE +E A++RR   + KML++T+ GQPVMKYRIEHLL++I  S
Sbjct: 134 RKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKKS 178

[Close]
BLAST of CmoCh17G011020 vs. NCBI nr
Match: gi|659101125|ref|XP_008451439.1| (PREDICTED: rRNA-processing protein fyv7 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 161/190 (84.74%), Postives = 169/190 (88.95%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E +NR KS FM   KH N+KRLGGK LSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN  NERPSSSTVGLVEGEN TK ENQTNGR GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of CmoCh17G011020 vs. NCBI nr
Match: gi|778727886|ref|XP_004136058.2| (PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 7.7e-76
Identity = 161/190 (84.74%), Postives = 168/190 (88.42%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E  NR KS FM N KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN  NERPSSSTV LVEGEN TK ENQTN R GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 191
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]
BLAST of CmoCh17G011020 vs. NCBI nr
Match: gi|255559320|ref|XP_002520680.1| (PREDICTED: rRNA-processing protein FYV7 [Ricinus communis])

HSP 1 Score: 175.6 bits (444), Expect = 8.1e-41
Identity = 106/186 (56.99%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 3   KRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFY 62
           K  G++E  N  KS  MK KK KNM RLGG+GLSLE FAN KS++ +YNPA+IKKQREFY
Sbjct: 8   KDEGKNEKFNGTKSMDMKKKKKKNMMRLGGQGLSLEVFANAKSSSSHYNPAVIKKQREFY 67

Query: 63  KNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQE 122
           KNAK+VSK+KK +K Q    +  SS+   L E ++    E++   ++ K++  G  SL+E
Sbjct: 68  KNAKYVSKFKKKIKQQQSQPDNLSSAVKSL-EDKDDESGEDRNMVKKNKKKKNGSHSLRE 127

Query: 123 LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEHLL 182
           LYE++H+EKEKAR E+EAII AKKEE+E+A+A R   REKM K+T+ GQPVMKYRIEHLL
Sbjct: 128 LYEKQHQEKEKARTEREAIIKAKKEEREKAEAHRKAEREKMFKKTRHGQPVMKYRIEHLL 187

Query: 183 KTIGAS 189
           +TI  S
Sbjct: 188 QTIQGS 192

[Close]
BLAST of CmoCh17G011020 vs. NCBI nr
Match: gi|802688469|ref|XP_012082667.1| (PREDICTED: stress response protein nst1-like [Jatropha curcas])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 112/192 (58.33%), Postives = 139/192 (72.40%), Query Frame = 1 

Query: 1   MKKRT-GEDEVQNRPK---SAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIK 60
           MK R+ G+DE +N+ K   SA +  KK KNM RLGG  LSLEAFAN KST + YNPALIK
Sbjct: 1   MKNRSLGKDE-ENKTKINSSASISMKKKKNMMRLGGPALSLEAFANAKSTRNKYNPALIK 60

Query: 61  KQREFYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKG 120
           KQREFYKNAK+VSK+KK ++ QN   E  +SS V  +E  N T  E+    ++   + KG
Sbjct: 61  KQREFYKNAKYVSKFKKKLRQQNQQTE--TSSVVTNLEDNNETG-ESSEIIKKNNNKKKG 120

Query: 121 IPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKY 180
             SL++LYE++HEEKEKAR E+EA I AK EE+E+A+ARR   REKM K+T+ GQPVMKY
Sbjct: 121 SYSLKKLYEKQHEEKEKARTEREAFIKAKNEEREKAEARRKAEREKMFKKTRHGQPVMKY 180

Query: 181 RIEHLLKTIGAS 189
           RIEHLL+TI  S
Sbjct: 181 RIEHLLQTIQGS 188

[Close]
BLAST of CmoCh17G011020 vs. NCBI nr
Match: gi|356505508|ref|XP_003521532.1| (PREDICTED: stress response protein NST1-like [Glycine max])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKK     + Q+  K   M  KK  N+ RLGG GLSL AFAN K   ++YNPA+IKKQRE
Sbjct: 1   MKKNEERSDNQSMKKKQIMMKKK--NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAK+V+K+KKLVK QN  NE   S     +E  N T+ EN+ +  R K +N  + SL
Sbjct: 61  FYKNAKNVNKFKKLVKQQNQQNE--PSLAQRHIENVNETE-ENKDDSERRKRKNSAL-SL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           +ELY+++HEEKEK  ME+EA++  KKEE+E+A+ARR   REKMLK+T+KGQPVMKYRIEH
Sbjct: 121 EELYKKQHEEKEKEIMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 189
           LL+TI  S
Sbjct: 181 LLETIQGS 182

The following BLAST results are available for this feature:
BLAST of CmoCh17G011020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh17G011020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L3_CUCSA5.4e-7684.74Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393990 PE=4 SV=1[more]
B9S3W1_RICCO5.6e-4156.99Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0556030 PE=4 SV=1[more]
A0A0B2R2H4_GLYSO2.0e-3856.38Uncharacterized protein OS=Glycine soja GN=glysoja_038858 PE=4 SV=1[more]
I1JQH0_SOYBN2.0e-3856.38Uncharacterized protein OS=Glycine max GN=GLYMA_03G209500 PE=4 SV=1[more]
A0A0B2SGZ8_GLYSO2.6e-3856.91Uncharacterized protein OS=Glycine soja GN=glysoja_002132 PE=4 SV=1[more]
BLAST of CmoCh17G011020 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03180.15.0e-3347.70 rRNA processing (InterPro:IPR013730)[more]
BLAST of CmoCh17G011020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101125|ref|XP_008451439.1|1.6e-7684.74PREDICTED: rRNA-processing protein fyv7 [Cucumis melo][more]
gi|778727886|ref|XP_004136058.2|7.7e-7684.74PREDICTED: uncharacterized protein LOC101216293 [Cucumis sativus][more]
gi|255559320|ref|XP_002520680.1|8.1e-4156.99PREDICTED: rRNA-processing protein FYV7 [Ricinus communis][more]
gi|802688469|ref|XP_012082667.1|2.9e-3858.33PREDICTED: stress response protein nst1-like [Jatropha curcas][more]
gi|356505508|ref|XP_003521532.1|2.9e-3856.38PREDICTED: stress response protein NST1-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013730Fyv7/TAP26
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G011020.1CmoCh17G011020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013730Fyv7/TAP26PANTHERPTHR15657UNCHARACTERIZEDcoord: 1..191
score: 9.4
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 55..185
score: 8.9
NoneNo IPR availableunknownCoilCoilcoord: 120..162
scor
NoneNo IPR availablePANTHERPTHR15657:SF1THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26coord: 1..191
score: 9.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G011020Cucsa.025180Cucumber (Gy14) v1cgycmoB1028
CmoCh17G011020CmaCh17G011280Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G011020CmaCh08G003900Cucurbita maxima (Rimu)cmacmoB896
CmoCh17G011020Cla014700Watermelon (97103) v1cmowmB322
CmoCh17G011020Csa7G393990Cucumber (Chinese Long) v2cmocuB378
CmoCh17G011020MELO3C015900Melon (DHL92) v3.5.1cmomeB319
CmoCh17G011020ClCG09G006430Watermelon (Charleston Gray)cmowcgB299
CmoCh17G011020CSPI07G16960Wild cucumber (PI 183967)cmocpiB381
CmoCh17G011020Lsi02G023530Bottle gourd (USVL1VR-Ls)cmolsiB337
CmoCh17G011020Cp4.1LG12g05360Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G011020Cp4.1LG17g06950Cucurbita pepo (Zucchini)cmocpeB339
CmoCh17G011020MELO3C015900.2Melon (DHL92) v3.6.1cmomedB366
CmoCh17G011020CsaV3_7G028720Cucumber (Chinese Long) v3cmocucB0455
CmoCh17G011020Cla97C09G168960Watermelon (97103) v2cmowmbB369
CmoCh17G011020BhiUN245G6Wax gourdcmowgoB0471
CmoCh17G011020CsGy7G015420Cucumber (Gy14) v2cgybcmoB909
CmoCh17G011020Carg22164Silver-seed gourdcarcmoB1160
CmoCh17G011020Carg07206Silver-seed gourdcarcmoB0152
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh17G011020CmoCh08G003840Cucurbita moschata (Rifu)cmocmoB319
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G011020Melon (DHL92) v3.6.1cmomedB357
CmoCh17G011020Watermelon (97103) v2cmowmbB359
CmoCh17G011020Cucurbita moschata (Rifu)cmocmoB199
CmoCh17G011020Cucurbita moschata (Rifu)cmocmoB329
CmoCh17G011020Cucurbita maxima (Rimu)cmacmoB254
CmoCh17G011020Cucurbita pepo (Zucchini)cmocpeB336
CmoCh17G011020Bottle gourd (USVL1VR-Ls)cmolsiB328