CsGy6G032110 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G032110
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein RKD5
Location	Chr6 : 29463073 .. 29463856 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATGGTCATCTATCTTGTTTTCCCAATGGAGAGTTATGTCAGCTAAAGAATGGCAAATCTCATCAACCAAGAAACTTGCCTCTACTTGATCAGGATCTTAACTTCCTTCCTTGTTCAGTTTCTGTATCTAAAGAATCTGGGAATCAAATGGAGGAGTCCTGTGCATCAGGTTTGGCTAAAACTCTCTTTATAAAGGGAATGTTATGAAGTTTTTTTTGAACAACTAGAAATAGTAGTTCATATGAAAGTTGACTAAACAGGTGGGGAATTGATAGGTATTGTAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTAGAATTACTTTATCCGATCTGGCTAAAAATTTTGGTGTTCCGATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTTGGCATTCACCGCTGGCCACACAGAAAGATAAAGTCTATTGATGGTCTAATTCGAGATCTTCAGGTTATCCCTTCTTTCCTATTTTGTATCTAGAACTTGATTGCAACTTAGAAAGGCACATAGTTTGTTTATGGAAAAGGGTGTTTGTAGGAAGAAGCAAAGCATAGGGAGGAAGATCACAAAGCTTTGATGGCAGTGACCAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGGATAGAGAGGACACCATTTAGGGAGCTGGAGAATGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTATAG

mRNA sequence

ATGAAGAATGGTCATCTATCTTGTTTTCCCAATGGAGAGTTATGTCAGCTAAAGAATGGCAAATCTCATCAACCAAGAAACTTGCCTCTACTTGATCAGGATCTTAACTTCCTTCCTTGTTCAGTTTCTGTATCTAAAGAATCTGGGAATCAAATGGAGGAGTCCTGTGCATCAGGTATTGTAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTAGAATTACTTTATCCGATCTGGCTAAAAATTTTGGTGTTCCGATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTTGGCATTCACCGCTGGCCACACAGAAAGATAAAGTCTATTGATGGTCTAATTCGAGATCTTCAGGAAGAAGCAAAGCATAGGGAGGAAGATCACAAAGCTTTGATGGCAGTGACCAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGGATAGAGAGGACACCATTTAGGGAGCTGGAGAATGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTATAG

Coding sequence (CDS)

ATGAAGAATGGTCATCTATCTTGTTTTCCCAATGGAGAGTTATGTCAGCTAAAGAATGGCAAATCTCATCAACCAAGAAACTTGCCTCTACTTGATCAGGATCTTAACTTCCTTCCTTGTTCAGTTTCTGTATCTAAAGAATCTGGGAATCAAATGGAGGAGTCCTGTGCATCAGGTATTGTAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTAGAATTACTTTATCCGATCTGGCTAAAAATTTTGGTGTTCCGATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTTGGCATTCACCGCTGGCCACACAGAAAGATAAAGTCTATTGATGGTCTAATTCGAGATCTTCAGGAAGAAGCAAAGCATAGGGAGGAAGATCACAAAGCTTTGATGGCAGTGACCAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGGATAGAGAGGACACCATTTAGGGAGCTGGAGAATGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTATAG

Protein sequence

MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALESQSPSV

Homology

[Close]

BLAST of CsGy6G032110 vs. NCBI nr
Match: XP_004134999.1 (PREDICTED: protein RKD5-like isoform X2 [Cucumis sativus] >KGN48995.1 hypothetical protein Csa_6G509650 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 9.3e-105
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI 60
           MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI 60

Query: 61  VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK 120
           VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK
Sbjct: 61  VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK 120

Query: 121 SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF 180
           SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF
Sbjct: 121 SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF 180

Query: 181 RRKHKARALESQSPSV 197
           RRKHKARALESQSPSV
Sbjct: 181 RRKHKARALESQSPSV 196

[Close]

BLAST of CsGy6G032110 vs. NCBI nr
Match: XP_011658076.1 (PREDICTED: protein RKD5-like isoform X1 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 6.6e-103
Identity = 196/201 (97.51%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCAS-- 60
           MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCAS  
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGG 60

Query: 61  ---GIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWP 120
              GIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWP
Sbjct: 61  ELIGIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWP 120

Query: 121 HRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRF 180
           HRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRF
Sbjct: 121 HRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRF 180

Query: 181 RQDVFRRKHKARALESQSPSV 197
           RQDVFRRKHKARALESQSPSV
Sbjct: 181 RQDVFRRKHKARALESQSPSV 201

[Close]

BLAST of CsGy6G032110 vs. NCBI nr
Match: XP_016899254.1 (PREDICTED: protein RKD5 [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 3.4e-99
Identity = 190/197 (96.45%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESC-ASG 60
           MKN HLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSK SGNQMEESC  SG
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESG 60

Query: 61  IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120
           I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDV 180
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELE+ETKRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDV 180

Query: 181 FRRKHKARALESQSPSV 197
           FRRKHKARALESQSPSV
Sbjct: 181 FRRKHKARALESQSPSV 197

[Close]

BLAST of CsGy6G032110 vs. NCBI nr
Match: XP_022132648.1 (protein RKD5 [Momordica charantia])

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 152/185 (82.16%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASG-----IVEKKRRATSEH 76
           L NGK HQPRNLPLL+QDLNFLPCS + S+ S NQM+ES   G     I EKK+RATSEH
Sbjct: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 72

Query: 77  IARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136
           IA ITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 73  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 132

Query: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALES 196
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 133 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 192

[Close]

BLAST of CsGy6G032110 vs. NCBI nr
Match: XP_023544127.1 (protein RKD5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 144/197 (73.10%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESG---NQMEESCA 60
           M + +LSCFP     +L + K         L QDLNFLPCS S++   G   +QM+E C 
Sbjct: 17  MHDSYLSCFP-----KLNDDK--------FLHQDLNFLPCSSSMAVSKGPEIHQMKEFCE 76

Query: 61  SGIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHR 120
             + +KKRRATSEHIA I LSDLAK F VPITEASR+LNVGLTVLKRKCREFGIHRWPHR
Sbjct: 77  PVLAKKKRRATSEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHR 136

Query: 121 KIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQ 180
           KIKSIDGLIRDLQEEAKHREED KALMAVTKRQMMLQNERE IERTPFRELE+ETKRFRQ
Sbjct: 137 KIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQ 196

Query: 181 DVFRRKHKARALESQSP 195
           DVF+R+HKARAL S SP
Sbjct: 197 DVFKRRHKARALVSHSP 200

[Close]

BLAST of CsGy6G032110 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-36
Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 19  NGKSHQPRNLPLLDQDLNFLPCSVSVSKESGN--------------QMEESCASGIVEKK 78
           N    +PR L +L QDLN LP S + S+ES N                     + I++KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNXXXXXXXXXXXXXXXXXXXAKTEILKKK 232

Query: 79  RRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 138
           +R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 139 LIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRK 197
           LI DLQ EA K +E++  A MAV K+Q  L+ E+  I + PF E+  ETK+FRQ+ F+++
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

[Close]

BLAST of CsGy6G032110 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 39  PCSVSVSKESGNQMEESCASGIVEKKRRATSEHIARITLSDLAKN-FGVPITEASRNLNV 98
           P    +  E  N M+E  +   +  KRR   + +      ++ K  F +PIT+A++ LN+
Sbjct: 122 PNMEQILHEDVNTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNI 181

Query: 99  GLTVLKRKCREFGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQ 158
           G+T+LK++CRE GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+
Sbjct: 182 GVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALE----LLE 241

Query: 159 NERERIERTPFRELENETKRFRQDVFRRKHKARALESQS 194
            E++ IE  P  E  ++TKR RQ  F+ K+K R L S S
Sbjct: 242 MEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSS 276

[Close]

BLAST of CsGy6G032110 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 25  PRNLPLLDQDLNFLPCSVSVS----KESGNQMEESCASGIVEKKRRATSEHIARITLSDL 84
           P ++ LL Q+  F   S S S    +  G           V+KKR    +   ++ +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 85  AKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 144
            + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+      E  +
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEEVKN 213

Query: 145 KALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKAR 188
                       L+  R  IE+ P  EL + TK+ RQ  F+  +K R
Sbjct: 214 ------------LEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of CsGy6G032110 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 68  TSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIR 127
           TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK+ S++ LI 
Sbjct: 128 TSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLIS 187

Query: 128 DLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKH--- 187
           +++E  K   E++   +       ML+ E+  IE  P  E +++TKR RQ  F+  H   
Sbjct: 188 NVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRK 247

Query: 188 KARALESQSPSV 197
           K R+L+S    V
Sbjct: 248 KKRSLKSDQSQV 257

[Close]

BLAST of CsGy6G032110 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 63  KKRRATSEHIARITLS------DLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 122
           KKRR   E  +  ++S       ++  F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 123 RKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFR 182
           RK+ S+  LI +++E  K   E+++    +                 P  + E++TKR R
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENED--KLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLR 229

Query: 183 QDVFRRKHKAR 188
           Q  F+  HK +
Sbjct: 230 QACFKANHKRK 238

[Close]

BLAST of CsGy6G032110 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-35
Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 19  NGKSHQPRNLPLLDQDLNFLPCSVSVSKESGN--------------QMEESCASGIVEKK 78
           N    +PR L +L QDLN LP S + S+ES N                     + I++KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNXXXXXXXXXXXXXXXXXXXAKTEILKKK 232

Query: 79  RRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 138
           +R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 139 LIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRK 197
           LI DLQ EA K +E++  A MAV K+Q  L+ E+  I + PF E+  ETK+FRQ+ F+++
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

[Close]

BLAST of CsGy6G032110 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 39  PCSVSVSKESGNQMEESCASGIVEKKRRATSEHIARITLSDLAKN-FGVPITEASRNLNV 98
           P    +  E  N M+E  +   +  KRR   + +      ++ K  F +PIT+A++ LN+
Sbjct: 122 PNMEQILHEDVNTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNI 181

Query: 99  GLTVLKRKCREFGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQ 158
           G+T+LK++CRE GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+
Sbjct: 182 GVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALE----LLE 241

Query: 159 NERERIERTPFRELENETKRFRQDVFRRKHKARALESQS 194
            E++ IE  P  E  ++TKR RQ  F+ K+K R L S S
Sbjct: 242 MEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSS 276

[Close]

BLAST of CsGy6G032110 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16
Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 25  PRNLPLLDQDLNFLPCSVSVS----KESGNQMEESCASGIVEKKRRATSEHIARITLSDL 84
           P ++ LL Q+  F   S S S    +  G           V+KKR    +   ++ +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 85  AKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 144
            + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+      E  +
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEEVKN 213

Query: 145 KALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKAR 188
                       L+  R  IE+ P  EL + TK+ RQ  F+  +K R
Sbjct: 214 ------------LEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of CsGy6G032110 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.4e-16
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 68  TSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIR 127
           TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK+ S++ LI 
Sbjct: 128 TSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLIS 187

Query: 128 DLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKH--- 187
           +++E  K   E++   +       ML+ E+  IE  P  E +++TKR RQ  F+  H   
Sbjct: 188 NVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRK 247

Query: 188 KARALESQSPSV 197
           K R+L+S    V
Sbjct: 248 KKRSLKSDQSQV 257

[Close]

BLAST of CsGy6G032110 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.8e-12
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 63  KKRRATSEHIARITLS------DLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 122
           KKRR   E  +  ++S       ++  F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 123 RKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFR 182
           RK+ S+  LI +++E  K   E+++    +                 P  + E++TKR R
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENED--KLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLR 229

Query: 183 QDVFRRKHKAR 188
           Q  F+  HK +
Sbjct: 230 QACFKANHKRK 238

[Close]

BLAST of CsGy6G032110 vs. TrEMBL
Match: tr|A0A0A0KGY8|A0A0A0KGY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.1e-105
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI 60
           MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGI 60

Query: 61  VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK 120
           VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK
Sbjct: 61  VEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIK 120

Query: 121 SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF 180
           SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF
Sbjct: 121 SIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVF 180

Query: 181 RRKHKARALESQSPSV 197
           RRKHKARALESQSPSV
Sbjct: 181 RRKHKARALESQSPSV 196

[Close]

BLAST of CsGy6G032110 vs. TrEMBL
Match: tr|A0A1S4DTD9|A0A1S4DTD9_CUCME (protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.3e-99
Identity = 190/197 (96.45%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESC-ASG 60
           MKN HLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSK SGNQMEESC  SG
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESG 60

Query: 61  IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120
           I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDV 180
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELE+ETKRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDV 180

Query: 181 FRRKHKARALESQSPSV 197
           FRRKHKARALESQSPSV
Sbjct: 181 FRRKHKARALESQSPSV 197

[Close]

BLAST of CsGy6G032110 vs. TrEMBL
Match: tr|A0A2P5BMN4|A0A2P5BMN4_PARAD (RWP-RK domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_226510 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.0e-52
Identity = 118/182 (64.84%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 15  CQLKNGKSHQ-PRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGIVE-KKRRATSEHI 74
           CQ  N   HQ  RN+P+LDQDLN LP  V+ S+ S +Q  E  +SG +E KK+RATS+ I
Sbjct: 145 CQRNNQNHHQLRRNVPVLDQDLNCLPYPVTPSELSDDQQIEQSSSGTMEKKKKRATSKDI 204

Query: 75  ARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEE 134
           ARI LSDLAK F +PI EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D LIRDLQEE
Sbjct: 205 ARIALSDLAKYFDLPIVEASRNLEVGLTVLKKKCREFGIPRWPHRKIKSLDSLIRDLQEE 264

Query: 135 AKHREEDHK-ALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALES 194
            + +++D+K A +AV KRQ ML+NERE IE+ PF E++ ETKRFRQDVF+RKH+AR L +
Sbjct: 265 REWQQQDNKAAAIAVAKRQSMLENERESIEKKPFLEMKTETKRFRQDVFKRKHRARVLGT 324

[Close]

BLAST of CsGy6G032110 vs. TrEMBL
Match: tr|A0A2P4HU42|A0A2P4HU42_QUESU (Protein rkd5 OS=Quercus suber OX=58331 GN=CFP56_19182 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 7.9e-52
Identity = 118/198 (59.60%), Postives = 146/198 (73.74%), Query Frame = 0


Query: 1   MKNGHLSCFPNGELCQLKNGKSHQP-RNLPLLDQDLNFLPCSVSVSKESGNQMEESCASG 60
           M++   S FP GE CQ  +    Q  R+ P L  DLN LP  V+  + S +Q +E C+ G
Sbjct: 117 MEDKEQSRFPKGETCQQNDDCYRQSRRSSPTLHLDLNRLPYPVTEFESSEDQEKEHCSPG 176

Query: 61  IV-EKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 120
           IV  KK+RA SEH+ARI LSDLAK F +PI EASRNL VGLTVLKRKCREFGI RWPHRK
Sbjct: 177 IVHNKKKRAASEHVARIALSDLAKYFDLPIVEASRNLKVGLTVLKRKCREFGIPRWPHRK 236

Query: 121 IKSIDGLIRDLQEEAKHREEDHK-ALMAVTKRQMMLQNERERIERTPFRELENETKRFRQ 180
           IKS+D LI DLQEE + +++ +K A MAV KRQ ML++E+E IER PF EL+ ETK+FRQ
Sbjct: 237 IKSLDSLIHDLQEETERQQQKNKVAAMAVAKRQKMLESEKENIERKPFMELQCETKKFRQ 296

Query: 181 DVFRRKHKARALESQSPS 196
           DVF+R+H+ARA+ +Q PS
Sbjct: 297 DVFKRRHRARAIGNQDPS 314

[Close]

BLAST of CsGy6G032110 vs. TrEMBL
Match: tr|M5W3E6|M5W3E6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G181600 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 116/186 (62.37%), Postives = 141/186 (75.81%), Query Frame = 0


Query: 13  ELCQLKNGKSHQ-PRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGIVE-KKRRATSE 72
           E CQ  N  +HQ  R+ P+LD DLN LPC V +S+ S +Q       GI+E KK+RA SE
Sbjct: 17  ETCQGSNDNNHQLIRSSPILDLDLNSLPCPVPMSESSEDQEIGRSLPGIMEKKKKRAPSE 76

Query: 73  HIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQ 132
           H+A I LSDLAK F +PI EASRNLNVGLTVLK+KCREFGI RWPHRKIKS+DGLIRDLQ
Sbjct: 77  HVANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSLDGLIRDLQ 136

Query: 133 EEAK-HREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARAL 192
           EE +  ++E+  A +AV KRQ ML+NE+E IER PF E++ ETK+FRQDVF+R+H+AR L
Sbjct: 137 EETEIQQQENQAAALAVAKRQRMLENEKESIERKPFLEMKTETKKFRQDVFKRRHRARLL 196

Query: 193 ESQSPS 196
            SQ  S
Sbjct: 197 RSQGLS 202

The following BLAST results are available for this feature:

BLAST of CsGy6G032110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134999.1	9.3e-105	100.00	PREDICTED: protein RKD5-like isoform X2 [Cucumis sativus] >KGN48995.1 hypothetic...	[more]
XP_011658076.1	6.6e-103	97.51	PREDICTED: protein RKD5-like isoform X1 [Cucumis sativus]	[more]
XP_016899254.1	3.4e-99	96.45	PREDICTED: protein RKD5 [Cucumis melo]	[more]
XP_022132648.1	1.7e-74	82.16	protein RKD5 [Momordica charantia]	[more]
XP_023544127.1	1.7e-66	73.10	protein RKD5-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G032110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35590.1	2.2e-36	47.42	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.0e-17	36.48	RWP-RK domain-containing protein	[more]
AT5G53040.1	2.3e-17	34.73	RWP-RK domain-containing protein	[more]
AT1G74480.1	5.2e-17	39.39	RWP-RK domain-containing protein	[more]
AT1G18790.1	2.7e-13	35.11	RWP-RK domain-containing protein	[more]

BLAST of CsGy6G032110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81791\|RKD5_ARATH	4.0e-35	47.42	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]
sp\|Q9FGD1\|RKD3_ARATH	1.9e-16	36.48	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
sp\|Q9LVU8\|RKD4_ARATH	4.2e-16	34.73	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
sp\|Q9CA66\|RKD2_ARATH	9.4e-16	39.39	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
sp\|Q9M9U9\|RKD1_ARATH	4.8e-12	35.11	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]

BLAST of CsGy6G032110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGY8\|A0A0A0KGY8_CUCSA	6.1e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4 SV=1	[more]
tr\|A0A1S4DTD9\|A0A1S4DTD9_CUCME	2.3e-99	96.45	protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1	[more]
tr\|A0A2P5BMN4\|A0A2P5BMN4_PARAD	6.0e-52	64.84	RWP-RK domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_...	[more]
tr\|A0A2P4HU42\|A0A2P4HU42_QUESU	7.9e-52	59.60	Protein rkd5 OS=Quercus suber OX=58331 GN=CFP56_19182 PE=4 SV=1	[more]
tr\|M5W3E6\|M5W3E6_PRUPE	1.8e-51	62.37	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G181600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G032110.1	CsGy6G032110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 48..192
None	No IPR available	PANTHER	PTHR32002:SF24	PROTEIN RKD5	coord: 48..192
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 75..122 e-value: 1.7E-21 score: 75.8
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 57..142 score: 18.201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G032110	Cla014353	Watermelon (97103) v1	cgybwmB468
CsGy6G032110	Csa6G509650	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G032110	ClCG01G020910	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G032110	CSPI06G32480	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G032110	CmaCh03G006240	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G032110	Lsi01G005290	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G032110	CsaV3_6G047870	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G032110	Cla97C01G020460	Watermelon (97103) v2	cgybwmbB394
CsGy6G032110	Carg00539	Silver-seed gourd	carcgybB0418

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G032110	Watermelon (97103) v1	cgybwmB422
CsGy6G032110	Wild cucumber (PI 183967)	cgybcpiB272
CsGy6G032110	Silver-seed gourd	carcgybB0360
CsGy6G032110	Silver-seed gourd	carcgybB0640
CsGy6G032110	Cucumber (Chinese Long) v3	cgybcucB277
CsGy6G032110	Watermelon (97103) v2	cgybwmbB400
CsGy6G032110	Wax gourd	cgybwgoB598
CsGy6G032110	Cucumber (Gy14) v2	cgybcgybB107
CsGy6G032110	Cucurbita maxima (Rimu)	cgybcmaB807
CsGy6G032110	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G032110	Cucurbita moschata (Rifu)	cgybcmoB787
CsGy6G032110	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G032110	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G032110	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G032110	Cucurbita pepo (Zucchini)	cgybcpeB763
CsGy6G032110	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G032110	Melon (DHL92) v3.5.1	cgybmeB436
CsGy6G032110	Melon (DHL92) v3.5.1	cgybmeB444
CsGy6G032110	Melon (DHL92) v3.6.1	cgybmedB433
CsGy6G032110	Melon (DHL92) v3.6.1	cgybmedB440
CsGy6G032110	Watermelon (Charleston Gray)	cgybwcgB394