ClCG01G020910 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G020910
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RWP-RK domain-containing family protein
Location	CG_Chr01 : 34913359 .. 34914208 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCTTACAGAGAGGGTTTTCGATTCAGTACAGAACTTAAAAAAGTTGCAGATCAAATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATTTCATCAACCAAAAAACTTGCCTCTACTTGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGGTTGGCTTCAACTTTCTCTCTCTAAAGGGAATGTATCAAACTTCTTTTTGAACATTTAGAACTAGGAGTTCATGTCTATATTATGAAAGTTGATTAACCAGGTGGGAAATTGCCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGTTATTCCTTTCTTCCTACTTTGCATCTAAGACTTCATTGCAACCTAGAAAGGCACGTAGTTTGTTTATGGAAAAGGGTGTTTGTAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTT

mRNA sequence

GTGCTTACAGAGAGGGTTTTCGATTCAGTACAGAACTTAAAAAAGTTGCAGATCAAATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATTTCATCAACCAAAAAACTTGCCTCTACTTGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGGTGGGAAATTGCCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTT

Coding sequence (CDS)

ATGAAGAATGCCCATCTATCTTGTTTTTCCAAGGGAGAGTTATGTGAACTAAAGAATGGCAAATTTCATCAACCAAAAAACTTGCCTCTACTTGACCAGGACCTTAACTTCCTTCCCTGTTGTTCAGTTGCTATATCTAAAGGGTCTGAGAATCAAATGAAAGAGTCCTGTGAACCAGGTGGGAAATTGCCAGTTATTGCAGAAAAGAAAAGGAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAAAACTTTGGTGTTCCAATCACAGAAGCTTCAAGAAATCTAAATGTTGGATTAACAGTACTGAAAAGAAAATGCAGAGAATTCGGCATTCATCGGTGGCCGCACAGGAAGATAAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGACCACAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGATTGAGACCAAGAGATTTAGGCAAGATGTTTTCAGGAGAAAGCATAAAGCTAGAGCTCTAGAAAGTCAGAGTCCATCAGTT

Protein sequence

MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPGGKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALESQSPSV

Homology

[Close]

BLAST of ClCG01G020910 vs. Swiss-Prot
Match: RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37
Identity = 91/195 (46.67%), Postives = 122/195 (62.56%), Query Frame = 1


Query: 19  NGKFHQPKNLPLLDQDLNFLPCCSVAISKGS---------ENQMKESCEPGGKLPVIAEK 78
           N    +P+ L +L QDLN LP       +           EN   E  E   K  ++ +K
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEIL-KK 232

Query: 79  KRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSID 138
           K+R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D
Sbjct: 233 KKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLD 292

Query: 139 GLIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRR 198
            LI DLQ EA K +E++  A MAV K+Q  L+ E+ +I + PF E+ IETK+FRQ+ F++
Sbjct: 293 CLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKK 352

Query: 199 KHKA-RALESQSPSV 203
           +H+A RA ++Q   V
Sbjct: 353 RHRASRAKKNQESLV 365

[Close]

BLAST of ClCG01G020910 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 1


Query: 69  KKRRATSEHIAGITLSD-LAKN-----FGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 128
           KKRR   E  +  ++S  L+K      F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 129 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRF 188
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE+ P  + E +TKR 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 189 RQDVFRRKHKARALESQSPSV 203
           RQ  F+  HK +     S  +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of ClCG01G020910 vs. Swiss-Prot
Match: RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1


Query: 65  VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 124
           +I++     TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK
Sbjct: 119 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

Query: 125 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 184
           + S++ LI +++E  K   E++   +       ML+ E+ +IE  P  E + +TKR RQ 
Sbjct: 179 LMSLNTLISNVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKTKRLRQA 238

Query: 185 VFRRKH---KARALESQSPSV 203
            F+  H   K R+L+S    V
Sbjct: 239 CFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of ClCG01G020910 vs. Swiss-Prot
Match: RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1


Query: 65  VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 124
           V  +KKR    +    + +S++ + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK
Sbjct: 132 VTVKKKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

Query: 125 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 184
           +KS++ LI++L+      E  +            L+  R  IE+ P  EL   TK+ RQ 
Sbjct: 192 LKSLNSLIKNLKNVGMEEEVKN------------LEEHRFLIEQEPDAELSDGTKKLRQA 248

Query: 185 VFRRKHKAR 194
            F+  +K R
Sbjct: 252 CFKANYKRR 248

[Close]

BLAST of ClCG01G020910 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.6e-17
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 1


Query: 70  KRRATSEHIAGITLSDLAKN-FGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSI 129
           KRR   + +      ++ K  F +PIT+A++ LN+G+T+LK++CRE GI RWPHRK+ S+
Sbjct: 147 KRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSL 206

Query: 130 DGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 189
           + LI   +DL    K R    K   A+     +L+ E++ IE  P  E   +TKR RQ  
Sbjct: 207 NALIANLKDLLGNTKGRTPKSKLRNALE----LLEMEKKMIEEVPDLEFGDKTKRLRQAC 266

Query: 190 FRRKHKARALESQS 200
           F+ K+K R L S S
Sbjct: 267 FKAKYKRRRLFSSS 276

[Close]

BLAST of ClCG01G020910 vs. TrEMBL
Match: A0A0A0KGY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509650 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-93
Identity = 179/202 (88.61%), Postives = 184/202 (91.09%), Query Frame = 1


Query: 1   MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPG 60
           MKN HLSCF  GELC+LKNGK HQP+NLPLLDQDLNFLPC SV++SK S NQM+ESC  G
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPC-SVSVSKESGNQMEESCASG 60

Query: 61  GKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120
                I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  -----IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 180
           PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKR 180

Query: 181 FRQDVFRRKHKARALESQSPSV 203
           FRQDVFRRKHKARALESQSPSV
Sbjct: 181 FRQDVFRRKHKARALESQSPSV 196

[Close]

BLAST of ClCG01G020910 vs. TrEMBL
Match: M5W3E6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011563mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.2e-53
Identity = 119/192 (61.98%), Postives = 144/192 (75.00%), Query Frame = 1


Query: 13  ELCELKNGKFHQP-KNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPGGKLPVIAEK-K 72
           E C+  N   HQ  ++ P+LD DLN LPC  V +S+ SE+Q     E G  LP I EK K
Sbjct: 17  ETCQGSNDNNHQLIRSSPILDLDLNSLPC-PVPMSESSEDQ-----EIGRSLPGIMEKKK 76

Query: 73  RRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 132
           +RA SEH+A I LSDLAK F +PI EASRNLNVGLTVLK+KCREFGI RWPHRKIKS+DG
Sbjct: 77  KRAPSEHVANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSLDG 136

Query: 133 LIRDLQEEAK-HREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRK 192
           LIRDLQEE +  ++E+  A +AV KRQ ML+NE+ESIER PF E++ ETK+FRQDVF+R+
Sbjct: 137 LIRDLQEETEIQQQENQAAALAVAKRQRMLENEKESIERKPFLEMKTETKKFRQDVFKRR 196

Query: 193 HKARALESQSPS 202
           H+AR L SQ  S
Sbjct: 197 HRARLLRSQGLS 202

[Close]

BLAST of ClCG01G020910 vs. TrEMBL
Match: A0A067LHU7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22391 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 114/195 (58.46%), Postives = 141/195 (72.31%), Query Frame = 1


Query: 6   LSCFSKGELCELKNGKFHQPK-NLPLLDQDLNFLPCCSVAISKGSENQMKESCEPGGKLP 65
           L   SKG+ CE   G   Q K +LP+LDQDLN LP  S+A  + S +Q  E   P     
Sbjct: 136 LQFLSKGK-CERARGDCCQSKKSLPVLDQDLNCLPY-SIATPELSNDQQTEPSAPEESCS 195

Query: 66  VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 125
            +A+KK+RA +E IA I L DL K FG+PI EASRNL VGLTVLK+KCREFGI RWPHRK
Sbjct: 196 SVAKKKKRAATEDIARIALEDLVKYFGLPIAEASRNLKVGLTVLKKKCREFGIPRWPHRK 255

Query: 126 IKSIDGLIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQ 185
           IKS+D LI +LQEEA + ++E+  A MAV KRQ ML+ E+E+IER PF E++ ETKRFRQ
Sbjct: 256 IKSLDSLIHNLQEEAERQKQENENAAMAVAKRQKMLEKEKETIERKPFIEIQSETKRFRQ 315

Query: 186 DVFRRKHKARALESQ 199
           DVF+R+H+ARAL +Q
Sbjct: 316 DVFKRRHRARALRNQ 328

[Close]

BLAST of ClCG01G020910 vs. TrEMBL
Match: A0A061DF33_THECC (Rab escort protein OS=Theobroma cacao GN=TCM_000070 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 119/203 (58.62%), Postives = 148/203 (72.91%), Query Frame = 1


Query: 2   KNAHLSCFSKGE-LCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPG 61
           K++  +C   G+  C+LK       ++L +LDQDLN LP  S+A S+  ++Q  E    G
Sbjct: 742 KSSKETCTRDGDNYCQLK-------RSLLVLDQDLNCLPN-SIATSELLKSQHTEQSATG 801

Query: 62  GKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 121
               V  +KK+RA S+ IA I L DLAK F +PI EASRNLNVGLTVLKRKCREFGI RW
Sbjct: 802 ----VAVKKKKRADSKDIARIALEDLAKYFDLPIVEASRNLNVGLTVLKRKCREFGIPRW 861

Query: 122 PHRKIKSIDGLIRDLQEEAKHR-EEDHKALMAVTKRQMMLQNERESIERTPFRELEIETK 181
           PHRKIKS+DGLIRDLQEEA+ R +ED  A  AV KR+MML+ E+ESIER PF EL+ ETK
Sbjct: 862 PHRKIKSLDGLIRDLQEEAEQRQQEDEAAAFAVAKRRMMLETEKESIEREPFIELKSETK 921

Query: 182 RFRQDVFRRKHKARALESQSPSV 203
           RFRQD+F+R+HKA+AL++Q  SV
Sbjct: 922 RFRQDIFKRRHKAKALKNQCLSV 932

[Close]

BLAST of ClCG01G020910 vs. TrEMBL
Match: B9H668_POPTR (RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0005s10400g PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-50
Identity = 113/198 (57.07%), Postives = 144/198 (72.73%), Query Frame = 1


Query: 3   NAHLSCFSKGELCELKNGKFHQPK-NLPLLDQDLNFLPCCSVAISKGSENQMKESCEPGG 62
           N   S FS  E+CE+     HQ K +LP+LDQDLN LP  SV+ S+ S+++  E C  G 
Sbjct: 158 NEEPSRFSSKEICEVDRDNCHQSKKSLPVLDQDLNCLPN-SVSPSELSKSEQIELCAAG- 217

Query: 63  KLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWP 122
              V+ +KK+RA SE IA I L D+ K FG+PI EASRNL VGLTVLKRKCRE GI RWP
Sbjct: 218 ---VMEKKKKRAASEDIARIALEDVVKCFGLPIVEASRNLKVGLTVLKRKCRELGIPRWP 277

Query: 123 HRKIKSIDGLIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 182
           HRKIKS+D LI  LQEEA +H++++    MAV KR+ ML+ E+E+IE+ PF E++ ETKR
Sbjct: 278 HRKIKSLDSLICSLQEEAERHKQDNEDTTMAVAKRRRMLEREKETIEKKPFMEIQSETKR 337

Query: 183 FRQDVFRRKHKARALESQ 199
           FRQDVF+R+H+ARAL +Q
Sbjct: 338 FRQDVFKRRHRARALGNQ 350

[Close]

BLAST of ClCG01G020910 vs. TAIR10
Match: AT4G35590.1 (AT4G35590.1 RWP-RK domain-containing protein)

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-39
Identity = 91/195 (46.67%), Postives = 122/195 (62.56%), Query Frame = 1


Query: 19  NGKFHQPKNLPLLDQDLNFLPCCSVAISKGS---------ENQMKESCEPGGKLPVIAEK 78
           N    +P+ L +L QDLN LP       +           EN   E  E   K  ++ +K
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEIL-KK 232

Query: 79  KRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSID 138
           K+R  S H+A ++L +L+K F + I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D
Sbjct: 233 KKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLD 292

Query: 139 GLIRDLQEEA-KHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRR 198
            LI DLQ EA K +E++  A MAV K+Q  L+ E+ +I + PF E+ IETK+FRQ+ F++
Sbjct: 293 CLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKK 352

Query: 199 KHKA-RALESQSPSV 203
           +H+A RA ++Q   V
Sbjct: 353 RHRASRAKKNQESLV 365

[Close]

BLAST of ClCG01G020910 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 94.7 bits (234), Expect = 6.8e-20
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 1


Query: 69  KKRRATSEHIAGITLSD-LAKN-----FGVPITEASRNLNVGLTVLKRKCREFGIHRWPH 128
           KKRR   E  +  ++S  L+K      F +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 129 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRF 188
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE+ P  + E +TKR 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 189 RQDVFRRKHKARALESQSPSV 203
           RQ  F+  HK +     S  +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of ClCG01G020910 vs. TAIR10
Match: AT1G74480.1 (AT1G74480.1 RWP-RK domain-containing protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-19
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1


Query: 65  VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 124
           +I++     TS     ++   +++ F +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK
Sbjct: 119 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

Query: 125 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 184
           + S++ LI +++E  K   E++   +       ML+ E+ +IE  P  E + +TKR RQ 
Sbjct: 179 LMSLNTLISNVKELQKMEGEENAEKLQDALE--MLEKEKRTIEDLPDLEFKDKTKRLRQA 238

Query: 185 VFRRKH---KARALESQSPSV 203
            F+  H   K R+L+S    V
Sbjct: 239 CFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of ClCG01G020910 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1


Query: 65  VIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 124
           V  +KKR    +    + +S++ + F  PI +A++ LNVGLTVLK++CRE GI+RWPHRK
Sbjct: 132 VTVKKKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

Query: 125 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQD 184
           +KS++ LI++L+      E  +            L+  R  IE+ P  EL   TK+ RQ 
Sbjct: 192 LKSLNSLIKNLKNVGMEEEVKN------------LEEHRFLIEQEPDAELSDGTKKLRQA 248

Query: 185 VFRRKHKAR 194
            F+  +K R
Sbjct: 252 CFKANYKRR 248

[Close]

BLAST of ClCG01G020910 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 89.0 bits (219), Expect = 3.7e-18
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 1


Query: 70  KRRATSEHIAGITLSDLAKN-FGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSI 129
           KRR   + +      ++ K  F +PIT+A++ LN+G+T+LK++CRE GI RWPHRK+ S+
Sbjct: 147 KRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSL 206

Query: 130 DGLI---RDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDV 189
           + LI   +DL    K R    K   A+     +L+ E++ IE  P  E   +TKR RQ  
Sbjct: 207 NALIANLKDLLGNTKGRTPKSKLRNALE----LLEMEKKMIEEVPDLEFGDKTKRLRQAC 266

Query: 190 FRRKHKARALESQS 200
           F+ K+K R L S S
Sbjct: 267 FKAKYKRRRLFSSS 276

[Close]

BLAST of ClCG01G020910 vs. NCBI nr
Match: gi|659080660|ref|XP_008440912.1| (PREDICTED: protein RKD5 isoform X1 [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.3e-97
Identity = 185/203 (91.13%), Postives = 191/203 (94.09%), Query Frame = 1


Query: 1   MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESC-EP 60
           MKN HLSCF  GELC+LKNGK HQP+NLPLLDQDLNFLP CSV++SKGS NQM+ESC E 
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLP-CSVSVSKGSGNQMEESCDES 60

Query: 61  GGKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHR 120
           GG+L  IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHR
Sbjct: 61  GGELIGIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHR 120

Query: 121 WPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETK 180
           WPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETK
Sbjct: 121 WPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETK 180

Query: 181 RFRQDVFRRKHKARALESQSPSV 203
           RFRQDVFRRKHKARALESQSPSV
Sbjct: 181 RFRQDVFRRKHKARALESQSPSV 202

[Close]

BLAST of ClCG01G020910 vs. NCBI nr
Match: gi|659080664|ref|XP_008440914.1| (PREDICTED: protein RKD5 isoform X2 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.4e-96
Identity = 182/202 (90.10%), Postives = 188/202 (93.07%), Query Frame = 1


Query: 1   MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPG 60
           MKN HLSCF  GELC+LKNGK HQP+NLPLLDQDLNFLPC SV++SKGS NQM+ESC+  
Sbjct: 1   MKNPHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPC-SVSVSKGSGNQMEESCDES 60

Query: 61  GKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120
           G    IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  G----IAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 180
           PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKR 180

Query: 181 FRQDVFRRKHKARALESQSPSV 203
           FRQDVFRRKHKARALESQSPSV
Sbjct: 181 FRQDVFRRKHKARALESQSPSV 197

[Close]

BLAST of ClCG01G020910 vs. NCBI nr
Match: gi|778719919|ref|XP_011658076.1| (PREDICTED: protein RKD5-like isoform X1 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 5.4e-96
Identity = 181/202 (89.60%), Postives = 187/202 (92.57%), Query Frame = 1


Query: 1   MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPG 60
           MKN HLSCF  GELC+LKNGK HQP+NLPLLDQDLNFLPC SV++SK S NQM+ESC  G
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPC-SVSVSKESGNQMEESCASG 60

Query: 61  GKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120
           G+L  I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  GELIGIVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 180
           PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKR 180

Query: 181 FRQDVFRRKHKARALESQSPSV 203
           FRQDVFRRKHKARALESQSPSV
Sbjct: 181 FRQDVFRRKHKARALESQSPSV 201

[Close]

BLAST of ClCG01G020910 vs. NCBI nr
Match: gi|449434430|ref|XP_004134999.1| (PREDICTED: protein RKD5-like isoform X2 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93
Identity = 179/202 (88.61%), Postives = 184/202 (91.09%), Query Frame = 1


Query: 1   MKNAHLSCFSKGELCELKNGKFHQPKNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPG 60
           MKN HLSCF  GELC+LKNGK HQP+NLPLLDQDLNFLPC SV++SK S NQM+ESC  G
Sbjct: 1   MKNGHLSCFPNGELCQLKNGKSHQPRNLPLLDQDLNFLPC-SVSVSKESGNQMEESCASG 60

Query: 61  GKLPVIAEKKRRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120
                I EKKRRATSEHIA ITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW
Sbjct: 61  -----IVEKKRRATSEHIARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRW 120

Query: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKR 180
           PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERE IERTPFRELE ETKR
Sbjct: 121 PHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKR 180

Query: 181 FRQDVFRRKHKARALESQSPSV 203
           FRQDVFRRKHKARALESQSPSV
Sbjct: 181 FRQDVFRRKHKARALESQSPSV 196

[Close]

BLAST of ClCG01G020910 vs. NCBI nr
Match: gi|595807273|ref|XP_007202579.1| (hypothetical protein PRUPE_ppa011563mg [Prunus persica])

HSP 1 Score: 215.7 bits (548), Expect = 7.4e-53
Identity = 119/192 (61.98%), Postives = 144/192 (75.00%), Query Frame = 1


Query: 13  ELCELKNGKFHQP-KNLPLLDQDLNFLPCCSVAISKGSENQMKESCEPGGKLPVIAEK-K 72
           E C+  N   HQ  ++ P+LD DLN LPC  V +S+ SE+Q     E G  LP I EK K
Sbjct: 17  ETCQGSNDNNHQLIRSSPILDLDLNSLPC-PVPMSESSEDQ-----EIGRSLPGIMEKKK 76

Query: 73  RRATSEHIAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 132
           +RA SEH+A I LSDLAK F +PI EASRNLNVGLTVLK+KCREFGI RWPHRKIKS+DG
Sbjct: 77  KRAPSEHVANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSLDG 136

Query: 133 LIRDLQEEAK-HREEDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRK 192
           LIRDLQEE +  ++E+  A +AV KRQ ML+NE+ESIER PF E++ ETK+FRQDVF+R+
Sbjct: 137 LIRDLQEETEIQQQENQAAALAVAKRQRMLENEKESIERKPFLEMKTETKKFRQDVFKRR 196

Query: 193 HKARALESQSPS 202
           H+AR L SQ  S
Sbjct: 197 HRARLLRSQGLS 202

The following BLAST results are available for this feature:

BLAST of ClCG01G020910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RKD5_ARATH	1.2e-37	46.67	Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1	[more]
RKD1_ARATH	1.2e-18	39.01	Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1	[more]
RKD2_ARATH	1.0e-17	37.59	Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1	[more]
RKD4_ARATH	2.3e-17	37.98	Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1	[more]
RKD3_ARATH	6.6e-17	39.55	Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1	[more]

BLAST of ClCG01G020910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGY8_CUCSA	1.0e-93	88.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509650 PE=4 SV=1	[more]
M5W3E6_PRUPE	5.2e-53	61.98	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011563mg PE=4 SV=1	[more]
A0A067LHU7_JATCU	1.8e-50	58.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22391 PE=4 SV=1	[more]
A0A061DF33_THECC	1.8e-50	58.62	Rab escort protein OS=Theobroma cacao GN=TCM_000070 PE=4 SV=1	[more]
B9H668_POPTR	3.1e-50	57.07	RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0005s104...	[more]

BLAST of ClCG01G020910 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35590.1	6.5e-39	46.67	RWP-RK domain-containing protein	[more]
AT1G18790.1	6.8e-20	39.01	RWP-RK domain-containing protein	[more]
AT1G74480.1	5.7e-19	37.59	RWP-RK domain-containing protein	[more]
AT5G53040.1	1.3e-18	37.98	RWP-RK domain-containing protein	[more]
AT5G66990.1	3.7e-18	39.55	RWP-RK domain-containing protein	[more]

BLAST of ClCG01G020910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080660\|ref\|XP_008440912.1\|	1.3e-97	91.13	PREDICTED: protein RKD5 isoform X1 [Cucumis melo]	[more]
gi\|659080664\|ref\|XP_008440914.1\|	2.4e-96	90.10	PREDICTED: protein RKD5 isoform X2 [Cucumis melo]	[more]
gi\|778719919\|ref\|XP_011658076.1\|	5.4e-96	89.60	PREDICTED: protein RKD5-like isoform X1 [Cucumis sativus]	[more]
gi\|449434430\|ref\|XP_004134999.1\|	1.5e-93	88.61	PREDICTED: protein RKD5-like isoform X2 [Cucumis sativus]	[more]
gi\|595807273\|ref\|XP_007202579.1\|	7.4e-53	61.98	hypothetical protein PRUPE_ppa011563mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G020910.1	ClCG01G020910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 81..128 score: 1.9
IPR003035	RWP-RK domain	PROFILE	PS51519	RWP_RK	coord: 63..148 score: 17
None	No IPR available	unknown	Coil	Coil	coord: 132..152 scor
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 62..196 score: 1.2
None	No IPR available	PANTHER	PTHR32002:SF13	PROTEIN RKD5	coord: 62..196 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G020910	Csa6G509650	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G020910	MELO3C007974	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G020910	Cla014353	Watermelon (97103) v1	wcgwmB141
ClCG01G020910	Cla97C01G020460	Watermelon (97103) v2	wcgwmbB089
ClCG01G020910	Bhi03G000567	Wax gourd	wcgwgoB227
ClCG01G020910	CSPI06G32480	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G020910	Cucsa.044270	Cucumber (Gy14) v1	cgywcgB022
ClCG01G020910	Lsi01G005290	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G020910	CsGy6G032110	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G020910	MELO3C007974.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G020910	CsaV3_6G047870	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G020910	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G020910	Cucurbita pepo (Zucchini)	cpewcgB201
ClCG01G020910	Cucurbita pepo (Zucchini)	cpewcgB252
ClCG01G020910	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G020910	Bottle gourd (USVL1VR-Ls)	lsiwcgB395
ClCG01G020910	Cucumber (Gy14) v2	cgybwcgB193
ClCG01G020910	Melon (DHL92) v3.6.1	medwcgB410
ClCG01G020910	Silver-seed gourd	carwcgB0335
ClCG01G020910	Silver-seed gourd	carwcgB0397
ClCG01G020910	Silver-seed gourd	carwcgB0623
ClCG01G020910	Cucumber (Chinese Long) v3	cucwcgB213
ClCG01G020910	Watermelon (97103) v2	wcgwmbB095
ClCG01G020910	Watermelon (Charleston Gray)	wcgwcgB042
ClCG01G020910	Cucumber (Gy14) v1	cgywcgB558
ClCG01G020910	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G020910	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G020910	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G020910	Cucurbita moschata (Rifu)	cmowcgB286
ClCG01G020910	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G020910	Wild cucumber (PI 183967)	cpiwcgB212
ClCG01G020910	Cucumber (Chinese Long) v2	cuwcgB209
ClCG01G020910	Melon (DHL92) v3.5.1	mewcgB419
ClCG01G020910	Watermelon (97103) v1	wcgwmB118