CsGy6G029900 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G029900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	senescence-associated family protein%2C putative (DUF581)
Location	Chr6 : 28333019 .. 28335547 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTAGCATTTAATTAAAAAGAAAAGGAAAATATGTAAGATAAGGTTTGGAAATGAATGAAAAATGAGAAATGGATAACGATAAATGGCACAAGATTTGCACCTGATTAATGTTAATAAGATTAACATAAGTAGTGTGTGATTAATTAAGCATGGGGGCTGTGAAAAGAAAATAGAGTATAACCCACTTTACATCCTTTTCCGTAAACGTCAAATAATTGAAATAACAATTTTAACTTTACAGTTATTGGAGAAAAAGAAAAACTAAAAAAGCGTGACGTGGGATCTCTTGGGCTACGTGGTGCCCGCAAGCAACGGCCAAGATTCCCTCTCACTCATCATCAAAATACTAATTAATCAATCTCAGTCTCTCTTTCTCTCTCTAACTCAAAAACACTCTTCCTATATATTTCTTTATTTGCCCAATTGGCGTAGTTTCTCACACTCCTCCAACTTCCCCCACTCTCTCTTCTTCCTCCCGCCTCCACCTTCATTTTTCCGCTTCTTCTTCTTTTAATATGCTGCTTGGCAAACGCCCTCGTCTTCCCATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGGTACAGTACCCTCCTCTCTCTCGATTTCTTTTTCTTTCCCAATATCTTAAGAAAATTAGAATTTGTAATTTAATTTGGGAGATGTGACGCGTATGTGCAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGATGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAATTAATTAAGTAACGATCGATTAGAGTGGAAATATAAAAGTAAAAAAAAAAAAAATATTATTGTGGGTAGAAGTAGAGCGGAGGGGTTTATATGTATTTTATAATTACATAATATATGAATGTAATTCCAGTACCGACTCCGATTCCGGCTGGGGCGGTGGTTGGTCACACGCCAGCTGGGTGGGGTGTTGGAGTATGAGGTTACTATATGATGATGGGTATATTTTGGTAACTTTGTACAAATGGAATATTTGGAAAATCTTGAAAAAAGTAAAAAGGGAAAATGAAAACAAAAAAACTAAAGGGAAAGGAAAAATGCTGTGGGGAGAGGGGGAGGGGAGGGGAAGTATTATTTATTTGATGTCGATTTTGTATTAGATATATTGTAATTTTATGATCTGGAACACTTCTAAGTTCTAACTACCTAGCTCTACAACACCCATTAGAAAATTATTGTTTTTCTTTTTTAATTATTTAAAACATGAATTAAATGTATTTGGTATCAAATTATGAGATGAGACATATGAATTTGGTATCAAATTATGATATATGTGAATTTCAAGGAATGGTCGTTCGAGAATTGAAAATAGATTCAGTACCTTTTAAATTCTAACTAGTAATAGTAGTTTTTAGATCAAAAATATCTTTCATATAAATATACTCTTTTCATATATTTTTAAATGTATCTTTTTATGAGTTTACATTTCTTAAACCTCTTTCAAACAAAGTTAATTAAAACTAATCATATAAAATTTTAAAGAAAAATATATTATGCTGAATATAAATCCACTGAAAATAATTAAAATTATAAGCTTAATTTAGCTTCATATAATTAAATAATATCGATTTAAAAAAATTACAAATTAAAATTTACCAAACGTCAATCTTACTTTTTTCCACCGCTAATTTTAATAAAACTTTAAAGTAACTAGTCTAGAAGATAAAAGTATCTCAAATTTAAGCTTTCCAAGTCTGCTAACCACGATTACTATCTCTACAAATGATACCCAATATAGATAGAGATACCATTTATTTAAGATGTAACTACAAATTCTTGAAAGCTGCCACTTCAAACATTAGCCCGAATAGGCCCATTATCCCACTTGGCTAGAGCTGGCTGATTTGTACTTACAAAACCCAACTATCGAAATTATTCCTTTTATTATGCTGAAACAATCGATGCAATCTGCTTGTAACTTTTATGAGGTGAATATTTATATATAGAACAGTGTTTATCAAGAGAGTGTCTCCATAGCCTATTGAGCTTGAATGTTATTTCAGTTTAATAACATTAGTTATTCCACATCACTTGCTTTTTGGAAATGTGTGTTTACACCGTAAAAATTGTGAGCGTAGTAACTTTAAAAGAAAAATCATTTGTAGCAAACTACAAGCCCATTTCAGTAATTTTAATTGATAAAAGTATTGGAAATTATC

mRNA sequence

ATTTTTAGCATTTAATTAAAAAGAAAAGGAAAATATGTAAGATAAGGTTTGGAAATGAATGAAAAATGAGAAATGGATAACGATAAATGGCACAAGATTTGCACCTGATTAATGTTAATAAGATTAACATAAGTAGTGTGTGATTAATTAAGCATGGGGGCTGTGAAAAGAAAATAGAGTATAACCCACTTTACATCCTTTTCCGTAAACGTCAAATAATTGAAATAACAATTTTAACTTTACAGTTATTGGAGAAAAAGAAAAACTAAAAAAGCGTGACGTGGGATCTCTTGGGCTACGTGGTGCCCGCAAGCAACGGCCAAGATTCCCTCTCACTCATCATCAAAATACTAATTAATCAATCTCAGTCTCTCTTTCTCTCTCTAACTCAAAAACACTCTTCCTATATATTTCTTTATTTGCCCAATTGGCGTAGTTTCTCACACTCCTCCAACTTCCCCCACTCTCTCTTCTTCCTCCCGCCTCCACCTTCATTTTTCCGCTTCTTCTTCTTTTAATATGCTGCTTGGCAAACGCCCTCGTCTTCCCATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGATGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAATTAATTAAGTAACGATCGATTAGAGTGGAAATATAAAAGTAAAAAAAAAAAAAATATTATTGTGGGTAGAAGTAGAGCGGAGGGGTTTATATGTATTTTATAATTACATAATATATGAATGTAATTCCAGTACCGACTCCGATTCCGGCTGGGGCGGTGGTTGGTCACACGCCAGCTGGGTGGGGTGTTGGAGTATGAGGTTACTATATGATGATGGGTATATTTTGGTAACTTTGTACAAATGGAATATTTGGAAAATCTTGAAAAAAGTAAAAAGGGAAAATGAAAACAAAAAAACTAAAGGGAAAGGAAAAATGCTGTGGGGAGAGGGGGAGGGGAGGGGAAGTATTATTTATTTGATGTCGATTTTGTATTAGATATATTGTAATTTTATGATCTGGAACACTTCTAAGTTCTAACTACCTAGCTCTACAACACCCATTAGAAAATTATTGTTTTTCTTTTTTAATTATTTAAAACATGAATTAAATGTATTTGGTATCAAATTATGAGATGAGACATATGAATTTGGTATCAAATTATGATATATGTGAATTTCAAGGAATGGTCGTTCGAGAATTGAAAATAGATTCAGTACCTTTTAAATTCTAACTAGTAATAGTAGTTTTTAGATCAAAAATATCTTTCATATAAATATACTCTTTTCATATATTTTTAAATGTATCTTTTTATGAGTTTACATTTCTTAAACCTCTTTCAAACAAAGTTAATTAAAACTAATCATATAAAATTTTAAAGAAAAATATATTATGCTGAATATAAATCCACTGAAAATAATTAAAATTATAAGCTTAATTTAGCTTCATATAATTAAATAATATCGATTTAAAAAAATTACAAATTAAAATTTACCAAACGTCAATCTTACTTTTTTCCACCGCTAATTTTAATAAAACTTTAAAGTAACTAGTCTAGAAGATAAAAGTATCTCAAATTTAAGCTTTCCAAGTCTGCTAACCACGATTACTATCTCTACAAATGATACCCAATATAGATAGAGATACCATTTATTTAAGATGTAACTACAAATTCTTGAAAGCTGCCACTTCAAACATTAGCCCGAATAGGCCCATTATCCCACTTGGCTAGAGCTGGCTGATTTGTACTTACAAAACCCAACTATCGAAATTATTCCTTTTATTATGCTGAAACAATCGATGCAATCTGCTTGTAACTTTTATGAGGTGAATATTTATATATAGAACAGTGTTTATCAAGAGAGTGTCTCCATAGCCTATTGAGCTTGAATGTTATTTCAGTTTAATAACATTAGTTATTCCACATCACTTGCTTTTTGGAAATGTGTGTTTACACCGTAAAAATTGTGAGCGTAGTAACTTTAAAAGAAAAATCATTTGTAGCAAACTACAAGCCCATTTCAGTAATTTTAATTGATAAAAGTATTGGAAATTATC

Coding sequence (CDS)

ATGCTGCTTGGCAAACGCCCTCGTCTTCCCATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGATGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAA

Protein sequence

MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHNTTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR

Homology

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BLAST of CsGy6G029900 vs. NCBI nr
Match: XP_004143480.1 (PREDICTED: uncharacterized protein LOC101212321 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_6G500590 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 4.2e-84
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN
Sbjct: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
           TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ
Sbjct: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120

Query: 121 IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR 158
           IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR
Sbjct: 121 IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR 157

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BLAST of CsGy6G029900 vs. NCBI nr
Match: XP_008440627.1 (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-60
Identity = 136/167 (81.44%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYD-LHHPIPPVSLPH 60
           MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQP SDQ  NN   GYD LHHP+ PVS+P 
Sbjct: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQP-SDQ--NNT--GYDLLHHPM-PVSVPR 60

Query: 61  NTTAINYSALVSPRNLRDQS-------PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120
           NTTAINYSALVSPRNLR+QS       PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC
Sbjct: 61  NTTAINYSALVSPRNLRNQSARDGLSQPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120

Query: 121 SSECREKQIKEDERKEYGGKKKEERQAAGM----GVRGSRKKEAEGG 156
           SSECREKQIKEDERKEYGGK    RQ   M    GVRGS KKEAEGG
Sbjct: 121 SSECREKQIKEDERKEYGGKXXXXRQGGAMASTVGVRGSGKKEAEGG 161

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BLAST of CsGy6G029900 vs. NCBI nr
Match: XP_023004031.1 (protein MARD1 [Cucurbita maxima])

HSP 1 Score: 164.1 bits (414), Expect = 3.9e-37
Identity = 92/151 (60.93%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLGKR R+PIKRTTSMTGIRG + D E  E  SSDQ           H P P V +PHN
Sbjct: 1   MLLGKRSRVPIKRTTSMTGIRGGLADEELGE--SSDQ---------GAHAPPPAVGVPHN 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
           TT +NYSALVSPRN   Q   NDHFL TCGLCKR +APGRDIYMYRGDTAFCSSECREKQ
Sbjct: 61  TTMLNYSALVSPRNFGVQLGSNDHFLHTCGLCKRTIAPGRDIYMYRGDTAFCSSECREKQ 120

Query: 121 IKEDERKEYGGKKKEERQAAGMGVRGSRKKE 152
           IK+D                  G RGSR K+
Sbjct: 121 IKDDXXXXXXXXXXXXXXXXXXGERGSRSKK 140

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BLAST of CsGy6G029900 vs. NCBI nr
Match: XP_022962947.1 (protein MARD1-like [Cucurbita moschata])

HSP 1 Score: 163.7 bits (413), Expect = 5.1e-37
Identity = 84/123 (68.29%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLGKR R+PIKRT SMTGIRG + D E EE  +SDQ           H P P V +PHN
Sbjct: 1   MLLGKRSRVPIKRTASMTGIRGGLADEELEE--TSDQ---------GAHAPPPAVGVPHN 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
           TT +NYS LVSPRNL  Q   NDHFL TCGLCKR +APGRDIYMYRGDTAFCSSECREKQ
Sbjct: 61  TTMLNYSVLVSPRNLGVQLGSNDHFLHTCGLCKRTIAPGRDIYMYRGDTAFCSSECREKQ 112

Query: 121 IKE 124
           IK+
Sbjct: 121 IKD 112

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BLAST of CsGy6G029900 vs. NCBI nr
Match: XP_023518831.1 (protein MARD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.8 bits (408), Expect = 1.9e-36
Identity = 84/122 (68.85%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLGKR R+PIKRT SMTGIRG + D E EE  SSDQ           H P P V +PHN
Sbjct: 1   MLLGKRSRVPIKRTASMTGIRGGLADEELEE--SSDQ---------GAHAPPPAVGVPHN 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
           TT +NYS LVSPRNL  Q   NDHFL TCGLCKR +APGRDIYMYRGDTAFCS ECREKQ
Sbjct: 61  TTMLNYSVLVSPRNLGLQLGSNDHFLHTCGLCKRTIAPGRDIYMYRGDTAFCSLECREKQ 111

Query: 121 IK 123
           IK
Sbjct: 121 IK 111

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BLAST of CsGy6G029900 vs. TAIR10
Match: AT1G78020.1 (Protein of unknown function (DUF581))

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-22
Identity = 65/148 (43.92%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQ--IINNPGGGYDLHHPIPPVSLP 60
           MLLGKR R PI RTTS++ I+ D+ ++  E +PS+ Q   + +P   Y  +      ++ 
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDL-NLPSESEPSNQQKPTVASP---YGSNGQAVTAAVD 60

Query: 61  HNTTAINYS--ALVSPR-NLRDQS---PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120
            N   ++    ++V+PR NLR  S       HFLR+C LC+R L PGRDIYMYRGD AFC
Sbjct: 61  QNRGFLDQRLLSMVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFC 120

Query: 121 SSECREKQIKEDERKEYGGKKKEERQAA 141
           SSECR++Q+ +DERKE G      ++ A
Sbjct: 121 SSECRQEQMAQDERKEKGKSAAPAKEPA 144

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BLAST of CsGy6G029900 vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581))

HSP 1 Score: 100.5 bits (249), Expect = 9.6e-22
Identity = 68/138 (49.28%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQI--INNPGGGYDLHHPIPPVSLP 60
           MLLGKR R PIKRTTS++ I+ D+ +   E++PS  QI  +N      D H  +    L 
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDL-NQPSEQEPSDHQIQLVN-----VDEHRQVHQRLLD 60

Query: 61  HNTTAINYSALVSPRNL--RDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSEC 120
                    A+VSPR    R  S  ++ FLR+C LCKR L  GRDIYMYRGD AFCS EC
Sbjct: 61  QRLL-----AMVSPRGTQRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLEC 120

Query: 121 REKQIKEDERKEYGGKKK 135
           R++QI  DERKE   KKK
Sbjct: 121 RQQQITVDERKE---KKK 124

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BLAST of CsGy6G029900 vs. TAIR10
Match: AT4G39795.1 (Protein of unknown function (DUF581))

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLG RPR  ++RT S+T I  ++   +   Q S   +    GG       + PV+  H 
Sbjct: 1   MLLGNRPRPQMQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQRFLSPVN--HQ 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
                Y    SP +          FL  CG CKR LAPGRDIYMY+GD AFCS ECRE+Q
Sbjct: 61  RNERKYGGRSSPSS----------FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQ 115

Query: 121 IKEDERK 128
           ++ DE K
Sbjct: 121 MEHDEGK 115

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BLAST of CsGy6G029900 vs. TAIR10
Match: AT5G65040.1 (Protein of unknown function (DUF581))

HSP 1 Score: 84.3 bits (207), Expect = 7.1e-17
Identity = 57/131 (43.51%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           M+LGKR    IKRTTSM  I  D P +    QPS     +         HP  P+ +   
Sbjct: 1   MVLGKRHGSLIKRTTSMKMITLDTPTIYDASQPSDHLTFH--------QHPHNPMVV--- 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
             A NY                D FL+TC LC R L   RDIYMYRG+ AFCS ECREKQ
Sbjct: 61  -MASNY----------------DDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQ 103

Query: 121 IKEDERKEYGG 132
           IK DE+K   G
Sbjct: 121 IKLDEKKAKTG 103

[Close]

BLAST of CsGy6G029900 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581))

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 84  HFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEYGGKKKEERQAAGMG 143
           HFL +C LCK+RL   RDI+MYRGDT FCS ECRE+QI+ DE        KE++Q+    
Sbjct: 75  HFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDE-------AKEKKQSLSTS 134

Query: 144 VRGSRKKE 152
           V+  R+ E
Sbjct: 135 VKAMRRNE 135

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BLAST of CsGy6G029900 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 6.0e-05
Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 78  QSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDE 126
           ++   + FL  C  CK+ L   +DIY+YRG+  FCSSECR +++  D+
Sbjct: 213 ETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

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BLAST of CsGy6G029900 vs. TrEMBL
Match: tr|A0A0A0KK56|A0A0A0KK56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500590 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN
Sbjct: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60

Query: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120
           TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ
Sbjct: 61  TTAINYSALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQ 120

Query: 121 IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR 158
           IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR
Sbjct: 121 IKEDERKEYGGKKKEERQAAGMGVRGSRKKEAEGGGR 157

[Close]

BLAST of CsGy6G029900 vs. TrEMBL
Match: tr|A0A1S3B1J1|A0A1S3B1J1_CUCME (uncharacterized protein LOC103484988 OS=Cucumis melo OX=3656 GN=LOC103484988 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-60
Identity = 136/167 (81.44%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYD-LHHPIPPVSLPH 60
           MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQP SDQ  NN   GYD LHHP+ PVS+P 
Sbjct: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQP-SDQ--NNT--GYDLLHHPM-PVSVPR 60

Query: 61  NTTAINYSALVSPRNLRDQS-------PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120
           NTTAINYSALVSPRNLR+QS       PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC
Sbjct: 61  NTTAINYSALVSPRNLRNQSARDGLSQPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120

Query: 121 SSECREKQIKEDERKEYGGKKKEERQAAGM----GVRGSRKKEAEGG 156
           SSECREKQIKEDERKEYGGK    RQ   M    GVRGS KKEAEGG
Sbjct: 121 SSECREKQIKEDERKEYGGKXXXXRQGGAMASTVGVRGSGKKEAEGG 161

[Close]

BLAST of CsGy6G029900 vs. TrEMBL
Match: tr|A0A0B0MD97|A0A0B0MD97_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_13795 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.8e-26
Identity = 77/156 (49.36%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           M+LGKR R PIKRTTSMTGI  D+ D E       D II++P        P P +   H 
Sbjct: 1   MMLGKRSRQPIKRTTSMTGITVDVSDAEDVVDHHQDPIISHP--------PPPQIHPLHE 60

Query: 61  TTAIN------YSALVSPRN--------LRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYR 120
           +  +N      + A+VSPRN        +   +     FLR C LC RRLAPGRDIYMYR
Sbjct: 61  SPDVNSRYDQRFLAMVSPRNPASFTSHVIGSSTTAAAPFLRACWLCNRRLAPGRDIYMYR 120

Query: 121 GDTAFCSSECREKQIKEDERKE---YGGKKKEERQA 140
           GDTAFCS ECREKQ+K+DERKE       KKE+R A
Sbjct: 121 GDTAFCSQECREKQMKQDERKEKLNINASKKEDRHA 148

[Close]

BLAST of CsGy6G029900 vs. TrEMBL
Match: tr|A0A1R3KAP6|A0A1R3KAP6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09921 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.0e-25
Identity = 83/162 (51.23%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEE----QPSSDQIINNPGGGYD--LHHPIPP 60
           MLLGKR R PI+RTTSMTGI  D+ +VE EE    Q     II++P         H  P 
Sbjct: 1   MLLGKRSRHPIRRTTSMTGITVDVSNVEDEEAVVVQAPQPLIISDPYNNIQNPSFHEFPN 60

Query: 61  VSLPHNTTAINYS--ALVSPRNLRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFC 120
            +  HN T  + S  A+VSPRN          FLR+C LCKRRLAPGRDIYMYRGD AFC
Sbjct: 61  PN--HNFTGYDQSFLAMVSPRNHHHHVVDTAPFLRSCCLCKRRLAPGRDIYMYRGDAAFC 120

Query: 121 SSECREKQIKEDERKE---YGGKKKEERQAAGMGVRGSRKKE 152
           S ECREKQ+K+DERKE       KKE+R         S K E
Sbjct: 121 SLECREKQMKQDERKEKLNVLASKKEDRTGHSSSKPNSSKTE 160

[Close]

BLAST of CsGy6G029900 vs. TrEMBL
Match: tr|A0A2P5Y011|A0A2P5Y011_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11724 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.0e-25
Identity = 71/141 (50.35%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 1   MLLGKRPRLPIKRTTSMTGIRGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHN 60
           M+LGKR R PIKRTTSMTGI  D+ D E       D II++P        P P +   H 
Sbjct: 1   MMLGKRSRQPIKRTTSMTGITVDVSDAEDVVDHHQDPIISHP--------PPPQIHPLHE 60

Query: 61  TTAIN------YSALVSPRN--------LRDQSPPNDHFLRTCGLCKRRLAPGRDIYMYR 120
           +  +N      + A+VSPRN        +   +     FLR C LC RRLAPGRDIYMYR
Sbjct: 61  SPDVNSRYDQRFLAMVSPRNPASFTSHVIGSSTTAAAPFLRACWLCNRRLAPGRDIYMYR 120

Query: 121 GDTAFCSSECREKQIKEDERK 128
           GDTAFCS ECREKQ+K+DERK
Sbjct: 121 GDTAFCSQECREKQMKQDERK 133

The following BLAST results are available for this feature:

BLAST of CsGy6G029900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143480.1	4.2e-84	100.00	PREDICTED: uncharacterized protein LOC101212321 [Cucumis sativus] >KGN48767.1 hy...	[more]
XP_008440627.1	4.3e-60	81.44	PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo]	[more]
XP_023004031.1	3.9e-37	60.93	protein MARD1 [Cucurbita maxima]	[more]
XP_022962947.1	5.1e-37	68.29	protein MARD1-like [Cucurbita moschata]	[more]
XP_023518831.1	1.9e-36	68.85	protein MARD1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G029900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78020.1	7.3e-22	43.92	Protein of unknown function (DUF581)	[more]
AT1G22160.1	9.6e-22	49.28	Protein of unknown function (DUF581)	[more]
AT4G39795.1	1.1e-17	41.73	Protein of unknown function (DUF581)	[more]
AT5G65040.1	7.1e-17	43.51	Protein of unknown function (DUF581)	[more]
AT4G17670.1	2.4e-12	51.47	Protein of unknown function (DUF581)	[more]

BLAST of CsGy6G029900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGS1\|MARD1_ARATH	6.0e-05	41.67	Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2	[more]

BLAST of CsGy6G029900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK56\|A0A0A0KK56_CUCSA	2.8e-84	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500590 PE=4 SV=1	[more]
tr\|A0A1S3B1J1\|A0A1S3B1J1_CUCME	2.8e-60	81.44	uncharacterized protein LOC103484988 OS=Cucumis melo OX=3656 GN=LOC103484988 PE=...	[more]
tr\|A0A0B0MD97\|A0A0B0MD97_GOSAR	7.8e-26	49.36	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_13795 PE=4 SV=1	[more]
tr\|A0A1R3KAP6\|A0A1R3KAP6_9ROSI	5.0e-25	51.23	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09921 PE=4 SV=1	[more]
tr\|A0A2P5Y011\|A0A2P5Y011_GOSBA	5.0e-25	50.35	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11724 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G029900.1	CsGy6G029900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 79..127 e-value: 3.7E-26 score: 90.3
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 84..128 score: 26.281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..157
None	No IPR available	PANTHER	PTHR33059:SF4	F28K19.24-RELATED	coord: 1..138
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 1..138

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G029900	Cla014160	Watermelon (97103) v1	cgybwmB468
CsGy6G029900	Csa6G500590	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G029900	MELO3C007773	Melon (DHL92) v3.5.1	cgybmeB444
CsGy6G029900	ClCG01G018940	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G029900	CSPI06G30400	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G029900	CmaCh07G005300	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G029900	CmoCh07G005310	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G029900	CmoCh04G008590	Cucurbita moschata (Rifu)	cgybcmoB824
CsGy6G029900	Lsi01G007480	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G029900	Cp4.1LG19g09740	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G029900	Cp4.1LG01g09390	Cucurbita pepo (Zucchini)	cgybcpeB808
CsGy6G029900	MELO3C007773.2	Melon (DHL92) v3.6.1	cgybmedB440
CsGy6G029900	CsaV3_6G045620	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G029900	Cla97C01G018410	Watermelon (97103) v2	cgybwmbB394
CsGy6G029900	Bhi03G000933	Wax gourd	cgybwgoB592
CsGy6G029900	Carg16007	Silver-seed gourd	carcgybB0753
CsGy6G029900	Carg14199	Silver-seed gourd	carcgybB0932

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G029900	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G029900	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G029900	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G029900	Silver-seed gourd	carcgybB0418