CSPI06G30400 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCAAAAACACTCTTCCTATATATTTCTTTATTTGCCCAATTGGCGTAGTTTCTCACACTCCTCCAACTTCCCCCACTCTCTCTTCTTCCTCCCGCCTCCACCTTCATTTTTCCGCTTCTTCTTCTTTTAATATGCTGCTTGGCAAACGCCCTCGTCTTCCAATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGGTACAGTACCCTCCTCTCTCTCGATTTCTTTTTCTTTCCCAATATCTTAAGAAAATTAGAATTTGTAATTTAATTTGGGAGATGTGACGCGTATGTGCAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAATTAATTAAGTAACGATCGATTAGAGTGGAAATATAAAAGTAAAAAAAAAAAAATTATTATTGTGGGTAGAAGTAGAGAGGAGGGGTTTATATGTATTTTATAATTACATAATATATGAATGTAATTCCAGTACCGACTCCGATTCCGGCTGGGGCGGTGGTTGGTCACACGCCAGCTGGGTGGGGTGTTGGAGTATGAGGTTACTATATGATGATGGGTATATTTTGGTAACTTTGTACAAATGGAATATTTGGAAAATCTTGAAAAAAGTAAAAAGGGAAAATGAAAACAAAAGAACTAAAGGCAAAGGAAAAATGCTGTGGGGAGAGGGGGAGGGGAAGTATTATTTATTTGATGTAGATTTTGTATTAGATATATTGTAATTTTATGATCTGGAACACTTCTAAGTTCTAACTACCTAGCTCTACAACACCCATTAGAAAATTATTGTTTTTCTTTTTTAATTATTTAAAACATGAATTAAATGTATTTGGTATCAAATTATGAGATGAGACATATGAATTTGGTATCAAATTATGATATAT ATGCTGCTTGGCAAACGCCCTCGTCTTCCAATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAA ATGCTGCTTGGCAAACGCCCTCGTCTTCCAATCAAGAGAACTACCAGTATGACCGGAATCAGAGGGGATATCCCCGACGTCGAATTTGAAGAACAACCCTCATCCGATCAGATCATCAACAACCCCGGCGGCGGCTACGATCTTCACCACCCCATCCCCCCGGTTTCACTTCCTCATAATACCACCGCCATTAATTACTCCGCCTTGGTTTCTCCTCGAAATTTAAGAGATCAGTCCCCACCTAACGATCACTTCCTCCGCACGTGCGGTCTCTGCAAACGCCGCCTCGCTCCGGGCCGTGATATCTACATGTACAGAGGGGACACCGCGTTTTGCAGTTCGGAGTGTAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGTACGGAGGGAAGAAGAAAGAGGAGCGGCAAGCGGCGGGGATGGGGGTAAGGGGGTCGAGGAAGAAGGAAGCAGAGGGTGGAGGGAGGTAA
BLAST of CSPI06G30400 vs. TrEMBL
Match: A0A0A0KK56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500590 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 9.0e-85 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of CSPI06G30400 vs. TrEMBL
Match: A0A067E7Z4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030226mg PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.9e-26 Identity = 79/176 (44.89%), Postives = 96/176 (54.55%), Query Frame = 1
BLAST of CSPI06G30400 vs. TrEMBL
Match: A0A061DI88_THECC (Thioesterase superfamily protein OS=Theobroma cacao GN=TCM_046683 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.2e-26 Identity = 85/168 (50.60%), Postives = 102/168 (60.71%), Query Frame = 1
BLAST of CSPI06G30400 vs. TrEMBL
Match: A0A0B0MD97_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_13795 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-26 Identity = 79/166 (47.59%), Postives = 93/166 (56.02%), Query Frame = 1
BLAST of CSPI06G30400 vs. TrEMBL
Match: G8A369_MEDTR (DUF581 family protein OS=Medicago truncatula GN=MTR_3g073960 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.7e-25 Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 1
BLAST of CSPI06G30400 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581)) HSP 1 Score: 101.3 bits (251), Expect = 5.6e-22 Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 1
BLAST of CSPI06G30400 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581)) HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21 Identity = 68/138 (49.28%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of CSPI06G30400 vs. TAIR10
Match: AT4G39795.1 (AT4G39795.1 Protein of unknown function (DUF581)) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of CSPI06G30400 vs. TAIR10
Match: AT5G65040.1 (AT5G65040.1 Protein of unknown function (DUF581)) HSP 1 Score: 81.6 bits (200), Expect = 4.6e-16 Identity = 58/132 (43.94%), Postives = 65/132 (49.24%), Query Frame = 1
BLAST of CSPI06G30400 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581)) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
BLAST of CSPI06G30400 vs. NCBI nr
Match: gi|449451461|ref|XP_004143480.1| (PREDICTED: uncharacterized protein LOC101212321 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 1.3e-84 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of CSPI06G30400 vs. NCBI nr
Match: gi|659080132|ref|XP_008440627.1| (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo]) HSP 1 Score: 250.4 bits (638), Expect = 2.1e-63 Identity = 138/167 (82.63%), Postives = 141/167 (84.43%), Query Frame = 1
BLAST of CSPI06G30400 vs. NCBI nr
Match: gi|641827868|gb|KDO47041.1| (hypothetical protein CISIN_1g030226mg [Citrus sinensis]) HSP 1 Score: 127.1 bits (318), Expect = 2.7e-26 Identity = 79/176 (44.89%), Postives = 96/176 (54.55%), Query Frame = 1
BLAST of CSPI06G30400 vs. NCBI nr
Match: gi|590707468|ref|XP_007048013.1| (Thioesterase superfamily protein [Theobroma cacao]) HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26 Identity = 85/168 (50.60%), Postives = 102/168 (60.71%), Query Frame = 1
BLAST of CSPI06G30400 vs. NCBI nr
Match: gi|728807162|gb|KHF97368.1| (hypothetical protein F383_13795 [Gossypium arboreum]) HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26 Identity = 79/166 (47.59%), Postives = 93/166 (56.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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