CsGy6G028930 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAACTCTCTCACTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAAACTCCAAATTCAATTTCATCATATATAAAGTTTCATTTCAACTTTCTAAGTTTTTAGCCTCTTTTATTCATTCAAATTTATTCTCCACTGACTTTATTCTTTTGTTAATTGATTTATGCAGCTCATAGATCCTGATAAATTAAACCAAAGTTCATCAAATTTCCCCCATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGTAAAAGAAAACAGAACTTTTTTACTCTTTCCTTTTTTGCACAAATTAATTATGGGGAAAAAAATCTGATTTTTCTTGTTGGGTTTATGGTAATTTCAATTAGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGGTGACATTTATGTTCCTTATATCCTAATTAAATTTCTCTTCTTTATTATTATGCAAAAAAATTAAATTGTTTTCATGTATTCGTTTATTATTTTACAATCCACGGGTACACAAGTTGGCTACCTGCATCCGATCATTGCTCTTCCTTGAATTAGTAGTAACTGACGTTAAATCACACAAATCAACTTAAAAGCATATACTAGTATGGTTTAATTATCAATGTTTCAACAATTGGTTGTATATATCAAAAGTTAATGTTTCAAATTAGATCAAAGTTTACTATGAAAAATTTTACCTTGACGTTCAAATTCCACATTTTCCATTTGCTTTCAAGAAACATATAGAACCATTCAGCCTAAAATTAAAGTTTATGTGTGTGAAGATTTAAGTTTTTGTTCCTCTATTTCTTGCTATCCTTTTTTAGAAAAGAAAAAAAAATTAAGCTTTTTAATATATTCAAATTCTCAATAGTTGCAATGATTTTTTTTTGGTACTAGATGGATAAAGCTTCCATTCTTGGGGATGCAATAACATACATCAAAGATCTTCAAGAACGTTTGAAGGTTGCAAACGAACAAGCAGCCAAAGCAACAGTGGAATCCGTGGTGTTTGTGAACAAATCTGACGATGCCTCTACCATCATCGCCAGTGACGATTCCTCAGAGGAAAACAGCTCCTCGTCGTCAGACGGAGCGATTCCGGACGTAGAAGCAAGAGTGTCTGGAAAGGATGTCCTTTTGAGGATTCATGGCAAGAAATGCAAAGGCTGTCTTTCAAATATACTAAATCAAATAGAGAAACTTAATCTCACAGTTCTCAACTCTAGTGCTTTGCCATTTGGCAATTTCAGGCTTGATATAACAATTATTGCTCAGGTACTTAATACAAATTTTTTTTATTTTTCATTTTTTATAATTTTGTGGATATTGAGGTTTACGGGACTAATTTGATTTTATTAATTATATAATTTGCAGATGGATGACGATTTTTCCATGACAGTGAAGGAACTAGTGCAGAAACTAAGACAAGCTTCTCTTGAATTTATGTAAACTTACAAATGACGTAATTAATCCTTAATTTTAGAGATAATAAAGCCTTGTGGAATCCCTAATTAAGGTTTTTTTTTTCTCTTTTGCTTTCCTTTTAGAAATTTTTGCGTGGGGCAAATCTTTGACCACGTTAAGGAAATTTAGGAAAAGAAAAACAACCACATGTGCTGTAAATCAAGCTTTGTTTTTCCCCCTCTTTTAAGATTACTTTTGATTCCAATTTTTTGGGGGTGTCTTCTTTTGCACTTGGATCTAAAATCTTTATGTAAGATTTCGTTTATTGGATTAATTAACTTTTGTTGTAATAATTGTGAAGATCTTACAACTAATTCTATAGATCTGACAGCTCCAATACAACATATAAATTAAAACAAAAACTAATTAGAG TTCAACTCTCTCACTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAAACTCCAAATTCAATTTCATCATATATAAAGTTTCATTTCAACTTTCTAAGTTTTTAGCCTCTTTTATTCATTCAAATTTATTCTCCACTGACTTTATTCTTTTGTTAATTGATTTATGCAGCTCATAGATCCTGATAAATTAAACCAAAGTTCATCAAATTTCCCCCATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGGTGACATTTATGTTCCTTATATCCTAATTAAATTTCTCTTCTTTATTATTATGCAAAAAAATTAAATTGTTTTCATGTATTCGTTTATTATTTTACAATCCACGGGTACACAAGTTGGCTACCTGCATCCGATCATTGCTCTTCCTTGAATTAGTAGTAACTGACGTTAAATCACACAAATCAACTTAAAAGCATATACTAGTATGGTTTAATTATCAATGTTTCAACAATTGGTTGTATATATCAAAAGTTAATGTTTCAAATTAGATCAAAGTTTACTATGAAAAATTTTACCTTGACGTTCAAATTCCACATTTTCCATTTGCTTTCAAGAAACATATAGAACCATTCAGCCTAAAATTAAAGTTTATGTGTGTGAAGATTTAAGTTTTTGTTCCTCTATTTCTTGCTATCCTTTTTTAGAAAAGAAAAAAAAATTAAGCTTTTTAATATATTCAAATTCTCAATAGTTGCAATGATTTTTTTTTGGTACTAGATGGATAAAGCTTCCATTCTTGGGGATGCAATAACATACATCAAAGATCTTCAAGAACGTTTGAAGGTTGCAAACGAACAAGCAGCCAAAGCAACAGTGGAATCCGTGGTGTTTGTGAACAAATCTGACGATGCCTCTACCATCATCGCCAGTGACGATTCCTCAGAGGAAAACAGCTCCTCGTCGTCAGACGGAGCGATTCCGGACGTAGAAGCAAGAGTGTCTGGAAAGGATGTCCTTTTGAGGATTCATGGCAAGAAATGCAAAGGCTGTCTTTCAAATATACTAAATCAAATAGAGAAACTTAATCTCACAGTTCTCAACTCTAGTGCTTTGCCATTTGGCAATTTCAGGCTTGATATAACAATTATTGCTCAGATGGATGACGATTTTTCCATGACAGTGAAGGAACTAGTGCAGAAACTAAGACAAGCTTCTCTTGAATTTATGTAAACTTACAAATGACGTAATTAATCCTTAATTTTAGAGATAATAAAGCCTTGTGGAATCCCTAATTAAGGTTTTTTTTTTCTCTTTTGCTTTCCTTTTAGAAATTTTTGCGTGGGGCAAATCTTTGACCACGTTAAGGAAATTTAGGAAAAGAAAAACAACCACATGTGCTGTAAATCAAGCTTTGTTTTTCCCCCTCTTTTAAGATTACTTTTGATTCCAATTTTTTGGGGGTGTCTTCTTTTGCACTTGGATCTAAAATCTTTATGTAAGATTTCGTTTATTGGATTAATTAACTTTTGTTGTAATAATTGTGAAGATCTTACAACTAATTCTATAGATCTGACAGCTCCAATACAACATATAAATTAAAACAAAAACTAATTAGAG ATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGGTGACATTTATGTTCCTTATATCCTAA MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPAAPPPAKQARTSSGSSRRISSMATSSSSSQIISFGNIEMSPMVAQPSYDNNNNNNKTSNYYCSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKVTFMFLIS
BLAST of CsGy6G028930 vs. NCBI nr
Match: XP_004143425.1 (PREDICTED: transcription factor bHLH18-like [Cucumis sativus] >KGN48660.1 hypothetical protein Csa_6G497110 [Cucumis sativus]) HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsGy6G028930 vs. NCBI nr
Match: XP_008440467.1 (PREDICTED: transcription factor bHLH18-like [Cucumis melo] >XP_016899206.1 PREDICTED: transcription factor bHLH18-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50 Identity = 132/180 (73.33%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of CsGy6G028930 vs. NCBI nr
Match: XP_022132561.1 (transcription factor bHLH19-like isoform X2 [Momordica charantia]) HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32 Identity = 100/202 (49.50%), Postives = 112/202 (55.45%), Query Frame = 0
BLAST of CsGy6G028930 vs. NCBI nr
Match: XP_022132559.1 (transcription factor bHLH18-like isoform X1 [Momordica charantia]) HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32 Identity = 100/202 (49.50%), Postives = 112/202 (55.45%), Query Frame = 0
BLAST of CsGy6G028930 vs. NCBI nr
Match: XP_023004096.1 (transcription factor NAI1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 130.2 bits (326), Expect = 7.4e-27 Identity = 94/191 (49.21%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of CsGy6G028930 vs. TAIR10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 58.2 bits (139), Expect = 6.5e-09 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CsGy6G028930 vs. TAIR10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsGy6G028930 vs. TAIR10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 50/186 (26.88%), Postives = 75/186 (40.32%), Query Frame = 0
BLAST of CsGy6G028930 vs. TAIR10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of CsGy6G028930 vs. Swiss-Prot
Match: sp|Q1PF16|BH019_ARATH (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CsGy6G028930 vs. Swiss-Prot
Match: sp|Q1PF17|BH018_ARATH (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsGy6G028930 vs. Swiss-Prot
Match: sp|Q9T072|BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.8e-06 Identity = 50/186 (26.88%), Postives = 75/186 (40.32%), Query Frame = 0
BLAST of CsGy6G028930 vs. Swiss-Prot
Match: sp|Q8S3F1|BH020_ARATH (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of CsGy6G028930 vs. TrEMBL
Match: tr|A0A0A0KG27|A0A0A0KG27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497110 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 4.1e-58 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsGy6G028930 vs. TrEMBL
Match: tr|A0A1S4DT89|A0A1S4DT89_CUCME (transcription factor bHLH18-like OS=Cucumis melo OX=3656 GN=LOC103484896 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.8e-50 Identity = 132/180 (73.33%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of CsGy6G028930 vs. TrEMBL
Match: tr|A0A2P6RPH5|A0A2P6RPH5_ROSCH (Putative transcription factor bHLH family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0109611 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13 Identity = 74/207 (35.75%), Postives = 95/207 (45.89%), Query Frame = 0
BLAST of CsGy6G028930 vs. TrEMBL
Match: tr|A0A251NTJ5|A0A251NTJ5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G212000 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.2e-11 Identity = 95/217 (43.78%), Postives = 123/217 (56.68%), Query Frame = 0
BLAST of CsGy6G028930 vs. TrEMBL
Match: tr|A0A2P4HTX5|A0A2P4HTX5_QUESU (Transcription factor bhlh25 OS=Quercus suber OX=58331 GN=CFP56_61799 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.9e-11 Identity = 65/207 (31.40%), Postives = 90/207 (43.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |