CmaCh03G008680 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G008680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Basic helix loop helix (BHLH) DNA-binding family protein
Location	Cma_Chr03 : 6439677 .. 6441346 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCTTGGTTTTGTTGACCCTTTTCGCAATGGAAATCTCATCTGCAAAATGGTTATCTGATATGGTAAACACTTTTATGCCTTTTTTTTGCCTGTTTCAACTTCGTTTTCGCTTCTTTTTTTGCTTGATCTTATGTTTTTTGGGTTTTGGTTATAATTAGGATTTGGAATCTGCATTTATGGAAGATTTCGAAATGAACCCATTTGAGTGCACGCTAGACGAGCTCAGTTTCCAAACTTTCTCTGACGAAAGCCACACATCCCACCTAGATCTTGAGAACTCCGTACAAACTCCGCCGCCGCCGCCGGCCAAGCAGCCCCGGACCAGCGGCAGCTGGAACAACTCTTCCACTACCCGTCAAATTGCTTCCATGGCTGCTTCGTCTTCCTCATCACACATCATTTCATTCGGGAACTCCCATTCTTCTTCTCCACCTGCTTCTAACAAATTAGTTGGGAGCAATGGCAATTACAGCAACGTGAAGCCCAAATTCGAGATTGGGTGCGAAGGGAACATTGATTTGTCATCGGTGATCCCTCAAGGTTCCTATGAGAACAATCCAAATTGTTCCCCAAAATACGATGGTGTGGGAATGAAGAGAGGCGCTTCGGCTATGAATTATCGCAGCGCTTTGGTTGCTCAAGATCATGTCATAGCTGAGCGGAAGCGTAGAGAAAAGCTCAGCCAGCGATTCGTTGCTCTTTCAGCTCTTATTCCACACCTCAAGAAGGTGAGTACAACATCTAATTTTGACCTTAAAATTCAAGATTTTATTGACATTATTTAACGGATCAAATGGGTTTTTGGTAATAGATGGACAAAGCGTCTATTCTTGGGGATGCAATAGCATACATCAAGGATCTTCAAGAACGTTTGAAAGTTGCGGATGAAGAAGCAGCCAAATCAAGAGTGGAATCAGTGGTGGTTGTGAACAGATCCGAGGATGTCTCTGCCGTGGTGGAAGACGATTCCTCAGAGGAAAACAGCTCATCCGACAGAGCCATTCCAGAGATAGAAGCCAGAGTGTCTGGGAAGGATGTTCTGTTGAAGATTCATGGCAAGAAATGCAAAGGCTGCCTTTCAAATATGCTAAACCACATAGAGGAGCTTAATCTAACAGTCCTCAACAGCAGCGCCTTGCCATTTGGCAATTTCAGGATTGATATAACCATTATAGCAAAGGTACCGTGGATATTTTTCCATTTCAAAACTGCCATTTCTGGAGAATTAGCTTATTATGGGACTAAATTCATTTGCTTTATTATGTAATTGCAGATGGGTGATGGCTTTTCCATGACAGTGACGGAGCTAGTGCAGAAACTACGACAGGCTTGCCTACAATTCGTGTAAAATTACAATCTTCGTCACTCTCTGTCACAAAGGTTGCCTTTTGCCTACAATGCTCCAATAAACTGTTGATGATCTGCTTCCATTTTACTCCAGAATATGTTCAGCACGAGGGCGTTTTTTTTTAAAGAAAATTCTTCGCATTTTTTTGCGTGGGGCAGATCTTTGACCACGTTAAGGAAATTTAGGATAACAAAACACCCACATGTGCTGTAAATCCAAGACTTTTTTCCCCCAAGTTCCCGTTTTTTTGGGGAGTCTCCTTTGCATACGGATCTATAATTAATTATTGTAAGATGTTGATTATTATGGATTAATTAAG

mRNA sequence

AAACCTTGGTTTTGTTGACCCTTTTCGCAATGGAAATCTCATCTGCAAAATGGTTATCTGATATGGATTTGGAATCTGCATTTATGGAAGATTTCGAAATGAACCCATTTGAGTGCACGCTAGACGAGCTCAGTTTCCAAACTTTCTCTGACGAAAGCCACACATCCCACCTAGATCTTGAGAACTCCGTACAAACTCCGCCGCCGCCGCCGGCCAAGCAGCCCCGGACCAGCGGCAGCTGGAACAACTCTTCCACTACCCGTCAAATTGCTTCCATGGCTGCTTCGTCTTCCTCATCACACATCATTTCATTCGGGAACTCCCATTCTTCTTCTCCACCTGCTTCTAACAAATTAGTTGGGAGCAATGGCAATTACAGCAACGTGAAGCCCAAATTCGAGATTGGGTGCGAAGGGAACATTGATTTGTCATCGGTGATCCCTCAAGGTTCCTATGAGAACAATCCAAATTGTTCCCCAAAATACGATGGTGTGGGAATGAAGAGAGGCGCTTCGGCTATGAATTATCGCAGCGCTTTGGTTGCTCAAGATCATGTCATAGCTGAGCGGAAGCGTAGAGAAAAGCTCAGCCAGCGATTCGTTGCTCTTTCAGCTCTTATTCCACACCTCAAGAAGATGGACAAAGCGTCTATTCTTGGGGATGCAATAGCATACATCAAGGATCTTCAAGAACGTTTGAAAGTTGCGGATGAAGAAGCAGCCAAATCAAGAGTGGAATCAGTGGTGGTTGTGAACAGATCCGAGGATGTCTCTGCCGTGGTGGAAGACGATTCCTCAGAGGAAAACAGCTCATCCGACAGAGCCATTCCAGAGATAGAAGCCAGAGTGTCTGGGAAGGATGTTCTGTTGAAGATTCATGGCAAGAAATGCAAAGGCTGCCTTTCAAATATGCTAAACCACATAGAGGAGCTTAATCTAACAGTCCTCAACAGCAGCGCCTTGCCATTTGGCAATTTCAGGATTGATATAACCATTATAGCAAAGATGGGTGATGGCTTTTCCATGACAGTGACGGAGCTAGTGCAGAAACTACGACAGGCTTGCCTACAATTCGTGTAAAATTACAATCTTCGTCACTCTCTGTCACAAAGGTTGCCTTTTGCCTACAATGCTCCAATAAACTGTTGATGATCTGCTTCCATTTTACTCCAGAATATGTTCAGCACGAGGGCGTTTTTTTTTAAAGAAAATTCTTCGCATTTTTTTGCGTGGGGCAGATCTTTGACCACGTTAAGGAAATTTAGGATAACAAAACACCCACATGTGCTGTAAATCCAAGACTTTTTTCCCCCAAGTTCCCGTTTTTTTGGGGAGTCTCCTTTGCATACGGATCTATAATTAATTATTGTAAGATGTTGATTATTATGGATTAATTAAG

Coding sequence (CDS)

ATGGAAATCTCATCTGCAAAATGGTTATCTGATATGGATTTGGAATCTGCATTTATGGAAGATTTCGAAATGAACCCATTTGAGTGCACGCTAGACGAGCTCAGTTTCCAAACTTTCTCTGACGAAAGCCACACATCCCACCTAGATCTTGAGAACTCCGTACAAACTCCGCCGCCGCCGCCGGCCAAGCAGCCCCGGACCAGCGGCAGCTGGAACAACTCTTCCACTACCCGTCAAATTGCTTCCATGGCTGCTTCGTCTTCCTCATCACACATCATTTCATTCGGGAACTCCCATTCTTCTTCTCCACCTGCTTCTAACAAATTAGTTGGGAGCAATGGCAATTACAGCAACGTGAAGCCCAAATTCGAGATTGGGTGCGAAGGGAACATTGATTTGTCATCGGTGATCCCTCAAGGTTCCTATGAGAACAATCCAAATTGTTCCCCAAAATACGATGGTGTGGGAATGAAGAGAGGCGCTTCGGCTATGAATTATCGCAGCGCTTTGGTTGCTCAAGATCATGTCATAGCTGAGCGGAAGCGTAGAGAAAAGCTCAGCCAGCGATTCGTTGCTCTTTCAGCTCTTATTCCACACCTCAAGAAGATGGACAAAGCGTCTATTCTTGGGGATGCAATAGCATACATCAAGGATCTTCAAGAACGTTTGAAAGTTGCGGATGAAGAAGCAGCCAAATCAAGAGTGGAATCAGTGGTGGTTGTGAACAGATCCGAGGATGTCTCTGCCGTGGTGGAAGACGATTCCTCAGAGGAAAACAGCTCATCCGACAGAGCCATTCCAGAGATAGAAGCCAGAGTGTCTGGGAAGGATGTTCTGTTGAAGATTCATGGCAAGAAATGCAAAGGCTGCCTTTCAAATATGCTAAACCACATAGAGGAGCTTAATCTAACAGTCCTCAACAGCAGCGCCTTGCCATTTGGCAATTTCAGGATTGATATAACCATTATAGCAAAGATGGGTGATGGCTTTTCCATGACAGTGACGGAGCTAGTGCAGAAACTACGACAGGCTTGCCTACAATTCGTGTAA

Protein sequence

MEISSAKWLSDMDLESAFMEDFEMNPFECTLDELSFQTFSDESHTSHLDLENSVQTPPPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGNIDLSSVIPQGSYENNPNCSPKYDGVGMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSRVESVVVVNRSEDVSAVVEDDSSEENSSSDRAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV

Homology

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BLAST of CmaCh03G008680 vs. Swiss-Prot
Match: BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-37
Identity = 133/360 (36.94%), Postives = 202/360 (56.11%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLE-SAFMEDFEMNPFECTLDELSF---QTFSDESHTSHLDLENSVQT 60
           M I S +W S+ ++E ++ ++ F MN     + E  +    +F+  +  S+ DL   ++ 
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDL---IEM 60

Query: 61  PPPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNY 120
            PP   +    S S          + +  +S   HI    + HSSS   S +  GSN   
Sbjct: 61  KPPKILETTYISPS----------SHLPPNSKPHHI----HRHSSSRILSFEDYGSNDME 120

Query: 121 SNVKPKFEIGCEGNIDLSSVI-PQGSYENNPNC-SPKYDGVGMKRGASAMNYRSALVAQD 180
               P +         L+S+  P+   +  P+  S +++  G KR       +S   AQD
Sbjct: 121 HEYSPTY---------LNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSN--AQD 180

Query: 181 HVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSR 240
           H+IAERKRREKL+QRFVALSAL+P LKKMDKAS+LGDA+ +IK LQER+   +E+  + R
Sbjct: 181 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 240

Query: 241 VESVVVVNRSEDVSAVVEDD-----SSEENSSSDRAIPEIEARVSGKDVLLKIHGKKCKG 300
           +ES+V+V +S+    +++D+     SS E+  SD  +PEIE R S +DVL+KI  +K KG
Sbjct: 241 LESMVLVKKSK---LILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKG 300

Query: 301 CLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
            L+ ++  IE+L++ + NSS L FG   +DITIIAK    F MT+ ++V+ LR A   F+
Sbjct: 301 HLAKIMAEIEKLHILITNSSVLNFGP-TLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

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BLAST of CmaCh03G008680 vs. Swiss-Prot
Match: BH018_ARATH (Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-36
Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1


Query: 144 NNPNC--SPKYDGVGM-------------KRGASAMNYRSALVAQDHVIAERKRREKLSQ 203
           N+PN   SPK + +G+             KR  S    RS   AQDH++AERKRREKL+Q
Sbjct: 83  NSPNLIFSPKDEEIGLPEHKKAELIIRGTKRAQSLT--RSQSNAQDHILAERKRREKLTQ 142

Query: 204 RFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSRVESVVVVNRSEDVS 263
           RFVALSALIP LKKMDKAS+LGDAI +IK LQE +K  +E+  +  +ESVV+V +S  V 
Sbjct: 143 RFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVL 202

Query: 264 AVVEDDSSEENS-----SSDRAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNL 323
                 SS  +S     SS   +PEIE RVSGKDVL+KI  +K KG +  ++  IE+L L
Sbjct: 203 DENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGL 262

Query: 324 TVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKL 342
           ++ NS+ LPFG    DI+IIA+  + F M + ++V+ L
Sbjct: 263 SITNSNVLPFGP-TFDISIIAQKNNNFDMKIEDVVKNL 297

[Close]

BLAST of CmaCh03G008680 vs. Swiss-Prot
Match: BH019_ARATH (Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.2e-35
Identity = 91/201 (45.27%), Postives = 137/201 (68.16%), Query Frame = 1


Query: 151 KYDGVGMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILG 210
           K  G G KR   +   RS ++A++HV+AERKRREKLS++F+ALSAL+P LKK DK +IL 
Sbjct: 96  KLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILD 155

Query: 211 DAIAYIKDLQERLKVADEEAAKSR-VESVVVVNRSEDVSAVVEDDSSEENSSS-----DR 270
           DAI+ +K LQE+L+   EE   +R +ES+++V +S+      +++ +   S S     D+
Sbjct: 156 DAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSK---VFFDEEPNLSCSPSVHIEFDQ 215

Query: 271 AIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIA 330
           A+PEIEA++S  D+L++I  +K KGC+ N+LN IE   L + NS  LPFG+  +DIT++A
Sbjct: 216 ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLA 275

Query: 331 KMGDGFSMTV-TELVQKLRQA 345
           +M   FSM++  +LV+ LR A
Sbjct: 276 QMDKDFSMSILKDLVRNLRLA 293

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BLAST of CmaCh03G008680 vs. Swiss-Prot
Match: BH020_ARATH (Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.6e-32
Identity = 106/270 (39.26%), Postives = 160/270 (59.26%), Query Frame = 1


Query: 97  NSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGNIDLSS--VIPQGSYENNPNCSPKYDG 156
           NS SSSP +S+    S+G+ ++    F     G+ D  +  V    ++ N  +   K   
Sbjct: 63  NSTSSSPSSSS----SSGSRTSQVISF-----GSPDTKTNPVETSLNFSNQVSMDQK--- 122

Query: 157 VGMKRGASAMN--YRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDA 216
           VG KR     N   R   + ++HV+AERKRR+KL++R +ALSAL+P LKK DKA++L DA
Sbjct: 123 VGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDA 182

Query: 217 IAYIKDLQERLKVADEE--AAKSRVESVVVVNRSEDVSAVVEDDSSEENS---------- 276
           I ++K LQER+K  +EE    K   +S+++V RS+     ++DDSS  +S          
Sbjct: 183 IKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQ---VYLDDDSSSYSSTCSAASPLSS 242

Query: 277 SSD------RAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFG 336
           SSD      + +P IEARVS +D+L+++H +K KGC+  +L+ +E+  L V+NS  LPFG
Sbjct: 243 SSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFG 302

Query: 337 NFRIDITIIAKMGDGFSMTVTELVQKLRQA 345
           N  + ITI+ KM + FS  V E+V+ +R A
Sbjct: 303 NSTLVITILTKMDNKFSRPVEEVVKNIRVA 317

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BLAST of CmaCh03G008680 vs. Swiss-Prot
Match: MYC4_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=MYC4 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.1e-14
Identity = 70/235 (29.79%), Postives = 124/235 (52.77%), Query Frame = 1


Query: 97  NSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGN-IDLSSVIPQGSYENNPNCSPKYDGV 156
           +S+    P SN   G   ++++V P     C+ N  DL + + + +  N     P+    
Sbjct: 348 SSNKKRSPVSNNEEGML-SFTSVLP-----CDSNHSDLEASVAKEAESNRVVVEPEKKP- 407

Query: 157 GMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAY 216
             KRG    N R   +  +HV AER+RREKL+QRF +L A++P++ KMDKAS+LGDAI+Y
Sbjct: 408 -RKRGRKPANGREEPL--NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISY 467

Query: 217 IKDLQERLKVADEEAAKSRVESVVVVNRSEDVSAVVEDDSSEENSSSDRAIPEIEARVSG 276
           I +L+ +L+ A+ +  + + +  V+   + +  + V+D       SS     E++ ++ G
Sbjct: 468 ISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIG 527

Query: 277 KDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGF 331
            D +++I   K     +  +  ++EL+L V ++S     +  I    + KMG+ F
Sbjct: 528 WDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATV-KMGNQF 571

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BLAST of CmaCh03G008680 vs. TrEMBL
Match: A0A0A0KG27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497110 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-106
Identity = 243/359 (67.69%), Postives = 276/359 (76.88%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLESAFMEDFEMNPFECTLDELS-FQTFSDESHTSHLDLEN-SVQTP- 60
           MEISSAKWLS+M+LES+FM D EMNPFECTL+ELS FQTFSDES+TSH+DL+N SVQTP 
Sbjct: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPA 60

Query: 61  PPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYS 120
            PPPAKQ RTS     S ++R+I+SMA SSSSS IISFGN   S   A      +N N  
Sbjct: 61  APPPAKQARTS-----SGSSRRISSMATSSSSSQIISFGNIEMSPMVAQPSYDNNNNN-- 120

Query: 121 NVKPKFEIGCEGNIDLSSVIPQGSYENNPNCSP-KYDGVGMKRGASA---MNYRSALVAQ 180
                                  +  +N  CSP K  GVG+KR A+A    N RS LVAQ
Sbjct: 121 -----------------------NKTSNYYCSPNKNHGVGIKRSAAAAMNSNNRSPLVAQ 180

Query: 181 DHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKS 240
           DHV+AERKRREKLSQRFVALSALIP LKKMDKASILGDAI YIKDLQERLKVA+E+AAK+
Sbjct: 181 DHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKA 240

Query: 241 RVESVVVVNRSEDVSAVV-EDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGC 300
            VESVV VN+S+D S ++  DDSSEEN  SSSD AIP++EARVSGKDVLL+IHGKKCKGC
Sbjct: 241 TVESVVFVNKSDDASTIIASDDSSEENSSSSSDGAIPDVEARVSGKDVLLRIHGKKCKGC 300

Query: 301 LSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
           LSN+LN IE+LNLTVLNSSALPFGNFR+DITIIA+M D FSMTV ELVQKLRQA L+F+
Sbjct: 301 LSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 329

[Close]

BLAST of CmaCh03G008680 vs. TrEMBL
Match: M5WL55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017640mg PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 178/346 (51.45%), Postives = 243/346 (70.23%), Query Frame = 1


Query: 15  ESAFMEDFEMNPFECTLDELSFQTFSDESHTSHLDL---------ENSVQTPPPP----- 74
           +  F+  +EMN  + +LD+L+FQ+FS ES++S+ +            S++TP        
Sbjct: 3   DPTFIHQYEMNSLDYSLDDLNFQSFSSESYSSYPNFTPKATHNFSNASIETPQQAGTHER 62

Query: 75  PAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYSNVK 134
           PAKQP+   +WN  +T   I + AASSSSSH+ISF NS+SS P +S +  G+  N   +K
Sbjct: 63  PAKQPKNHTTWNPCTTDHTIMAKAASSSSSHLISFDNSNSSPPTSSQQFYGTLDN--TMK 122

Query: 135 PKFEIG-CEGNIDLSSVIPQGSYENNPNCSPKYDGVGMKRGASAMNYRSALVAQDHVIAE 194
           PK E+    G ++L+++I QGSY+    CSPK+ G G+KR A+    RS L AQDHV+AE
Sbjct: 123 PKNEVEYSNGKLNLTTLISQGSYDPQ-TCSPKH-GQGIKRAATVT--RSPLHAQDHVLAE 182

Query: 195 RKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSRVESVV 254
           RKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER K+ +E+A K  VE+VV
Sbjct: 183 RKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKHLQERTKMLEEKAVKKTVEAVV 242

Query: 255 VVNRSEDVSAVVEDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNH 314
            V R++  SA  +  SS+EN  SSSD+ +PEIEARVS K+VL+++H +K KGCL+ +L+ 
Sbjct: 243 FVKRTQ-YSADDDISSSDENFESSSDQPLPEIEARVSDKEVLIRVHCEKTKGCLAKILSE 302

Query: 315 IEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQ 344
           IE L+LT++NSS LPFGN  +DIT+IA+M   FSMTV +LV+ LRQ
Sbjct: 303 IESLDLTIVNSSVLPFGNSTLDITVIAQMDAEFSMTVKDLVKNLRQ 341

[Close]

BLAST of CmaCh03G008680 vs. TrEMBL
Match: W9RQB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016091 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-62
Identity = 171/380 (45.00%), Postives = 237/380 (62.37%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLESAFMEDFE-MNPFE--CTLDELSFQTFSDESHTSH------LDLE 60
           MEI SAKWLS+++++  F   ++ +N  +   + D+++FQ+FS ES++SH       + +
Sbjct: 1   MEIPSAKWLSELEMDYNFFHQYDQVNSLDHHYSFDDINFQSFSSESYSSHNTNFAPANSQ 60

Query: 61  NSVQTPPPP--------------PAKQPRTSGSWNNSSTT--------RQIASMAASSSS 120
           N      P               PAKQ + + SWNN+++          + ++ AASSSS
Sbjct: 61  NLGGAATPVDQAPHHQITDFESRPAKQLKINNSWNNNNSCTTNDNYHYHKTSAKAASSSS 120

Query: 121 SHIISFGNSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGNIDLSSVIPQGSYENNPNCS 180
           S IISF    SS+     K   +       +PK E    G+ D   +     ++ N N S
Sbjct: 121 SQIISFEKYASSAATTPEKYYDNLDQSPVKQPKDEPA--GSTDKYMIFQSSYHDRNENFS 180

Query: 181 PKYDGVGMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASIL 240
           PK   V  ++  +A   RS L AQDHVIAER+RREKL+QR++ALSA++P LKKMDKAS+L
Sbjct: 181 PKLGQVIREKRPAAAMSRSPLHAQDHVIAERRRREKLNQRYIALSAVVPGLKKMDKASVL 240

Query: 241 GDAIAYIKDLQERLKVADEEAAKSRVESVVVVNRSEDVSAVVEDDSSEEN--SSSDRAIP 300
           GDAI YIK LQER+ + +E+AAK  VESVV V RS  +SA  E  SS+EN  SSSD+ +P
Sbjct: 241 GDAITYIKTLQERVSILEEQAAKKTVESVVFVKRSH-LSADDEISSSDENFDSSSDQPLP 300

Query: 301 EIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMG 348
           EIEARVSGKDVL++IH +K KGCLSN+L  IE+L+LT++NSS LPFG     ITI+A+M 
Sbjct: 301 EIEARVSGKDVLIRIHCEKQKGCLSNILCEIEKLHLTIVNSSVLPFGGSTTHITIVAQMD 360

[Close]

BLAST of CmaCh03G008680 vs. TrEMBL
Match: A0A061DHY3_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_000895 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.9e-60
Identity = 178/372 (47.85%), Postives = 238/372 (63.98%), Query Frame = 1


Query: 1   MEISSAKWLSDMDL-ESAFMEDFEMNPFE--CTLDELSF--------QTFSDESHTSHLD 60
           M+ SSAKWLS++ + E   +    MN      T ++++         Q+FS ES++S+ +
Sbjct: 1   MDSSSAKWLSELGMDEYNIIHQCHMNSLAELTTAEDIATALTAGNFKQSFSSESYSSYPN 60

Query: 61  LE---------NSVQTPPPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHS 120
                      +S++T   P  KQ +TS SWN+S+TT  I     SS +S I+SF    S
Sbjct: 61  FNTKNATTFSGSSIETCERP-TKQIKTSTSWNSSTTTEHIPQKP-SSPTSQILSF--EKS 120

Query: 121 SSPPASNKLVGSNGNYSNVKPKFEIGCEGNIDLSSVIPQGSYENNPNCSPKYDGVGMKRG 180
           +S PA+++    N ++  +KPK E    GN++ S VI  G Y  N N +PK    G+KR 
Sbjct: 121 TSLPANSQQF-YNIDHHAMKPKDETVSSGNMNFSPVITNGPY-GNTNYAPK-PNPGIKRT 180

Query: 181 ASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQ 240
            S    RS   AQDH++AERKRREKLSQRF+ALSA++P LKKMDKAS+LGDAI Y+K LQ
Sbjct: 181 YSMT--RSPSHAQDHIMAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKQLQ 240

Query: 241 ERLKVADEEAAKSRVESVVVVNRSEDVSAVVEDDSSEENS---SSDRAIPEIEARVSGKD 300
           ERLKV +E+  K  VESVV V +S+ +SA  E  S EENS   SSD A+PEIEARVS  D
Sbjct: 241 ERLKVLEEQTKKRTVESVVFVKKSQ-LSADDETSSCEENSDSQSSDAALPEIEARVSDND 300

Query: 301 VLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTEL 350
           VL++IH +K KG +  +L+ IE L+LTV+NSS LPFGN  +DITIIA+    FSMTV +L
Sbjct: 301 VLIRIHCEKQKGFVVKILSEIENLHLTVVNSSVLPFGNSTLDITIIAQKDAEFSMTVKDL 360

[Close]

BLAST of CmaCh03G008680 vs. TrEMBL
Match: A0A0D2QXV7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G228900 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57
Identity = 170/380 (44.74%), Postives = 233/380 (61.32%), Query Frame = 1


Query: 1   MEISSAKWLSDMDL-ESAFMEDFEMNPFE--CTLDELSF---------QTFSDESHTSHL 60
           M+ SSAKWLS++ + E   +    MN      T D+L+          Q+FS ES++S+ 
Sbjct: 1   MDSSSAKWLSELGMDEYNIIHQCHMNTLAELTTTDDLATALVGGGNLKQSFSSESYSSYP 60

Query: 61  DL-----------ENSVQTPPPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGN 120
           +L            +S++TP   PAK  +T        T         SS +S I+SFGN
Sbjct: 61  NLYTKNTTTTISGSSSIETPDYRPAKHLKT--------THHHHVPPKPSSPTSQILSFGN 120

Query: 121 SHSSSPPASNKLVGSNGNYSNV----KPKFEIGCEGNIDLSSVIPQGSYENNPNCSPKYD 180
           S+S   PA+     S+ +Y NV     PK E    GN++    +  G YE+  N +PK +
Sbjct: 121 SNSL--PAT-----SHHHYYNVDNTVNPKDETLSSGNMNFLPPVTNGPYEST-NYAPKIN 180

Query: 181 GVGMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAI 240
             G+KR  S    R+  VAQDH+IAERKRREKLSQRF+ALSA++P LKKMDKAS+LGDAI
Sbjct: 181 NHGVKRTYSMT--RTPSVAQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAI 240

Query: 241 AYIKDLQERLKVADEEAAKSRVESVVVVNRS----EDVSAVVEDDSSEENSSSDRAIPEI 300
            Y+K LQER+KV +E+  K  VESVV V +S    +D S+  ED++SE   SSD A+PEI
Sbjct: 241 KYVKQLQERVKVLEEQTKKRTVESVVFVRKSQLSADDESSSCEDNNSELGPSSDAALPEI 300

Query: 301 EARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDG 350
           EARVS  DVL++IH +  KG +  +L+ IE L+L+V+NS+ALPFGN  +DITIIAK    
Sbjct: 301 EARVSDHDVLVRIHCENHKGFVPKILSEIENLHLSVVNSTALPFGNSTLDITIIAKKDSE 360

[Close]

BLAST of CmaCh03G008680 vs. TAIR10
Match: AT4G37850.1 (AT4G37850.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-38
Identity = 133/360 (36.94%), Postives = 202/360 (56.11%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLE-SAFMEDFEMNPFECTLDELSF---QTFSDESHTSHLDLENSVQT 60
           M I S +W S+ ++E ++ ++ F MN     + E  +    +F+  +  S+ DL   ++ 
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDL---IEM 60

Query: 61  PPPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNY 120
            PP   +    S S          + +  +S   HI    + HSSS   S +  GSN   
Sbjct: 61  KPPKILETTYISPS----------SHLPPNSKPHHI----HRHSSSRILSFEDYGSNDME 120

Query: 121 SNVKPKFEIGCEGNIDLSSVI-PQGSYENNPNC-SPKYDGVGMKRGASAMNYRSALVAQD 180
               P +         L+S+  P+   +  P+  S +++  G KR       +S   AQD
Sbjct: 121 HEYSPTY---------LNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSN--AQD 180

Query: 181 HVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSR 240
           H+IAERKRREKL+QRFVALSAL+P LKKMDKAS+LGDA+ +IK LQER+   +E+  + R
Sbjct: 181 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 240

Query: 241 VESVVVVNRSEDVSAVVEDD-----SSEENSSSDRAIPEIEARVSGKDVLLKIHGKKCKG 300
           +ES+V+V +S+    +++D+     SS E+  SD  +PEIE R S +DVL+KI  +K KG
Sbjct: 241 LESMVLVKKSK---LILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKG 300

Query: 301 CLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
            L+ ++  IE+L++ + NSS L FG   +DITIIAK    F MT+ ++V+ LR A   F+
Sbjct: 301 HLAKIMAEIEKLHILITNSSVLNFGP-TLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

[Close]

BLAST of CmaCh03G008680 vs. TAIR10
Match: AT2G22750.2 (AT2G22750.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-37
Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1


Query: 144 NNPNC--SPKYDGVGM-------------KRGASAMNYRSALVAQDHVIAERKRREKLSQ 203
           N+PN   SPK + +G+             KR  S    RS   AQDH++AERKRREKL+Q
Sbjct: 83  NSPNLIFSPKDEEIGLPEHKKAELIIRGTKRAQSLT--RSQSNAQDHILAERKRREKLTQ 142

Query: 204 RFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSRVESVVVVNRSEDVS 263
           RFVALSALIP LKKMDKAS+LGDAI +IK LQE +K  +E+  +  +ESVV+V +S  V 
Sbjct: 143 RFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVL 202

Query: 264 AVVEDDSSEENS-----SSDRAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNL 323
                 SS  +S     SS   +PEIE RVSGKDVL+KI  +K KG +  ++  IE+L L
Sbjct: 203 DENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGL 262

Query: 324 TVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKL 342
           ++ NS+ LPFG    DI+IIA+  + F M + ++V+ L
Sbjct: 263 SITNSNVLPFGP-TFDISIIAQKNNNFDMKIEDVVKNL 297

[Close]

BLAST of CmaCh03G008680 vs. TAIR10
Match: AT2G22760.1 (AT2G22760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-36
Identity = 91/201 (45.27%), Postives = 137/201 (68.16%), Query Frame = 1


Query: 151 KYDGVGMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILG 210
           K  G G KR   +   RS ++A++HV+AERKRREKLS++F+ALSAL+P LKK DK +IL 
Sbjct: 96  KLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILD 155

Query: 211 DAIAYIKDLQERLKVADEEAAKSR-VESVVVVNRSEDVSAVVEDDSSEENSSS-----DR 270
           DAI+ +K LQE+L+   EE   +R +ES+++V +S+      +++ +   S S     D+
Sbjct: 156 DAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSK---VFFDEEPNLSCSPSVHIEFDQ 215

Query: 271 AIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIA 330
           A+PEIEA++S  D+L++I  +K KGC+ N+LN IE   L + NS  LPFG+  +DIT++A
Sbjct: 216 ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLA 275

Query: 331 KMGDGFSMTV-TELVQKLRQA 345
           +M   FSM++  +LV+ LR A
Sbjct: 276 QMDKDFSMSILKDLVRNLRLA 293

[Close]

BLAST of CmaCh03G008680 vs. TAIR10
Match: AT2G22770.1 (AT2G22770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-33
Identity = 106/270 (39.26%), Postives = 160/270 (59.26%), Query Frame = 1


Query: 97  NSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGNIDLSS--VIPQGSYENNPNCSPKYDG 156
           NS SSSP +S+    S+G+ ++    F     G+ D  +  V    ++ N  +   K   
Sbjct: 63  NSTSSSPSSSS----SSGSRTSQVISF-----GSPDTKTNPVETSLNFSNQVSMDQK--- 122

Query: 157 VGMKRGASAMN--YRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDA 216
           VG KR     N   R   + ++HV+AERKRR+KL++R +ALSAL+P LKK DKA++L DA
Sbjct: 123 VGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDA 182

Query: 217 IAYIKDLQERLKVADEE--AAKSRVESVVVVNRSEDVSAVVEDDSSEENS---------- 276
           I ++K LQER+K  +EE    K   +S+++V RS+     ++DDSS  +S          
Sbjct: 183 IKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQ---VYLDDDSSSYSSTCSAASPLSS 242

Query: 277 SSD------RAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFG 336
           SSD      + +P IEARVS +D+L+++H +K KGC+  +L+ +E+  L V+NS  LPFG
Sbjct: 243 SSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFG 302

Query: 337 NFRIDITIIAKMGDGFSMTVTELVQKLRQA 345
           N  + ITI+ KM + FS  V E+V+ +R A
Sbjct: 303 NSTLVITILTKMDNKFSRPVEEVVKNIRVA 317

[Close]

BLAST of CmaCh03G008680 vs. TAIR10
Match: AT4G17880.1 (AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-15
Identity = 70/235 (29.79%), Postives = 124/235 (52.77%), Query Frame = 1


Query: 97  NSHSSSPPASNKLVGSNGNYSNVKPKFEIGCEGN-IDLSSVIPQGSYENNPNCSPKYDGV 156
           +S+    P SN   G   ++++V P     C+ N  DL + + + +  N     P+    
Sbjct: 348 SSNKKRSPVSNNEEGML-SFTSVLP-----CDSNHSDLEASVAKEAESNRVVVEPEKKP- 407

Query: 157 GMKRGASAMNYRSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAY 216
             KRG    N R   +  +HV AER+RREKL+QRF +L A++P++ KMDKAS+LGDAI+Y
Sbjct: 408 -RKRGRKPANGREEPL--NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISY 467

Query: 217 IKDLQERLKVADEEAAKSRVESVVVVNRSEDVSAVVEDDSSEENSSSDRAIPEIEARVSG 276
           I +L+ +L+ A+ +  + + +  V+   + +  + V+D       SS     E++ ++ G
Sbjct: 468 ISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIG 527

Query: 277 KDVLLKIHGKKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGF 331
            D +++I   K     +  +  ++EL+L V ++S     +  I    + KMG+ F
Sbjct: 528 WDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATV-KMGNQF 571

[Close]

BLAST of CmaCh03G008680 vs. NCBI nr
Match: gi|449451351|ref|XP_004143425.1| (PREDICTED: transcription factor bHLH18-like [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 2.6e-106
Identity = 243/359 (67.69%), Postives = 276/359 (76.88%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLESAFMEDFEMNPFECTLDELS-FQTFSDESHTSHLDLEN-SVQTP- 60
           MEISSAKWLS+M+LES+FM D EMNPFECTL+ELS FQTFSDES+TSH+DL+N SVQTP 
Sbjct: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPA 60

Query: 61  PPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYS 120
            PPPAKQ RTS     S ++R+I+SMA SSSSS IISFGN   S   A      +N N  
Sbjct: 61  APPPAKQARTS-----SGSSRRISSMATSSSSSQIISFGNIEMSPMVAQPSYDNNNNN-- 120

Query: 121 NVKPKFEIGCEGNIDLSSVIPQGSYENNPNCSP-KYDGVGMKRGASA---MNYRSALVAQ 180
                                  +  +N  CSP K  GVG+KR A+A    N RS LVAQ
Sbjct: 121 -----------------------NKTSNYYCSPNKNHGVGIKRSAAAAMNSNNRSPLVAQ 180

Query: 181 DHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKS 240
           DHV+AERKRREKLSQRFVALSALIP LKKMDKASILGDAI YIKDLQERLKVA+E+AAK+
Sbjct: 181 DHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKA 240

Query: 241 RVESVVVVNRSEDVSAVV-EDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGC 300
            VESVV VN+S+D S ++  DDSSEEN  SSSD AIP++EARVSGKDVLL+IHGKKCKGC
Sbjct: 241 TVESVVFVNKSDDASTIIASDDSSEENSSSSSDGAIPDVEARVSGKDVLLRIHGKKCKGC 300

Query: 301 LSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
           LSN+LN IE+LNLTVLNSSALPFGNFR+DITIIA+M D FSMTV ELVQKLRQA L+F+
Sbjct: 301 LSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 329

[Close]

BLAST of CmaCh03G008680 vs. NCBI nr
Match: gi|659079831|ref|XP_008440467.1| (PREDICTED: transcription factor bHLH18-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 3.8e-105
Identity = 245/358 (68.44%), Postives = 272/358 (75.98%), Query Frame = 1


Query: 1   MEISSAKWLSDMDLESAFMEDFEMNPFECTLDELS-FQTFSDESHTSHLDLE-NSVQTP- 60
           MEISSA WLS+M+LES+FM D EMNPFECTL+ELS FQTFSDES+TSH+DL+ NSVQTP 
Sbjct: 1   MEISSANWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNNSVQTPT 60

Query: 61  PPPPAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYS 120
            PPPAKQ RTSGS      +R+IASMA SSSSS IISFGN   SS  A       N N +
Sbjct: 61  APPPAKQARTSGS------SRRIASMATSSSSSQIISFGNVELSSMVAQPSYDNKNNNKT 120

Query: 121 NVKPKFEIGCEGNIDLSSVIPQGSYENNPNCSP-KYDGVGMKRGASAM--NYRSALVAQD 180
                                      N  CSP K  GVG+KR  +AM  N RS LVAQ+
Sbjct: 121 --------------------------PNYYCSPNKNHGVGIKRSVAAMNSNNRSPLVAQE 180

Query: 181 HVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSR 240
           HV+AERKRREKLSQRFVALSALIP LKKMDKASILGDAI YIKDLQERLKVA+E+AAK+ 
Sbjct: 181 HVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKAT 240

Query: 241 VESVVVVNRSEDVSA-VVEDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGCL 300
           VESVV VN+SED S  VV DDSSEEN  SSSD AIP++EARVSGKDVLLKIH KKC GCL
Sbjct: 241 VESVVFVNKSEDASTIVVSDDSSEENSSSSSDGAIPDVEARVSGKDVLLKIHCKKCTGCL 300

Query: 301 SNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
           SN+LN IE+LNLTVLNSSALPFGNFR+DITIIA+M D FS+TV ELVQKLRQA L+F+
Sbjct: 301 SNILNQIEKLNLTVLNSSALPFGNFRVDITIIAQMDDDFSITVKELVQKLRQASLKFM 326

[Close]

BLAST of CmaCh03G008680 vs. NCBI nr
Match: gi|645219682|ref|XP_008236887.1| (PREDICTED: transcription factor bHLH25-like [Prunus mume])

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 184/365 (50.41%), Postives = 256/365 (70.14%), Query Frame = 1


Query: 3   ISSAKWLSDMDLES-AFMEDFEMNPFECTLDELSFQTFSDESHTSH-------------L 62
           ISSAKW+SD+++E   F+  +EMN  + +LD+L+FQ+FS ES++S+              
Sbjct: 4   ISSAKWVSDLEMEDPTFIHQYEMNSLDYSLDDLNFQSFSSESYSSYPNFTPKATHNFNNA 63

Query: 63  DLENSVQTPPPP-PAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASN 122
            +E S Q      PAKQP+   +WN  ++     + AASSSSSH+ISF NS+SS P +S 
Sbjct: 64  SIETSHQAGTHERPAKQPKNHTTWNPCTSDHTFMAKAASSSSSHLISFDNSNSSPPTSSQ 123

Query: 123 KLVGSNGNYSNVKPKFEIG-CEGNIDLSSVIPQGSYENNPNCSPKYDGVGMKRGASAMNY 182
           +  G+  N   +KPK E+    G ++L+++I QGSY+    CSP+++  G+KR A+    
Sbjct: 124 QFYGNLDN--TMKPKNEVEYSNGKLNLTTLISQGSYDPQ-TCSPRHE-QGIKRAATVT-- 183

Query: 183 RSALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVA 242
           RS L AQDHV+AERKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER ++ 
Sbjct: 184 RSPLHAQDHVLAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKHLQERTRML 243

Query: 243 DEEAAKSRVESVVVVNRSEDVSAVVEDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHG 302
           +E+A K  VE+VV V R++  SA  +  SS+EN  S SD+ +PEIEARVS K+VL+++H 
Sbjct: 244 EEQAVKKTVEAVVFVKRTQ-YSADDDISSSDENFESCSDQPLPEIEARVSDKEVLIRVHC 303

Query: 303 KKCKGCLSNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQA 350
           +K KGCL+ +L+ IE L+LT++NSS LPFGN  +DIT+IA+M   FSMTV +LV+ LRQ+
Sbjct: 304 EKTKGCLAKILSEIESLDLTIVNSSVLPFGNSTLDITVIAQMDAEFSMTVKDLVKNLRQS 361

[Close]

BLAST of CmaCh03G008680 vs. NCBI nr
Match: gi|595831834|ref|XP_007206351.1| (hypothetical protein PRUPE_ppa017640mg [Prunus persica])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 178/346 (51.45%), Postives = 243/346 (70.23%), Query Frame = 1


Query: 15  ESAFMEDFEMNPFECTLDELSFQTFSDESHTSHLDL---------ENSVQTPPPP----- 74
           +  F+  +EMN  + +LD+L+FQ+FS ES++S+ +            S++TP        
Sbjct: 3   DPTFIHQYEMNSLDYSLDDLNFQSFSSESYSSYPNFTPKATHNFSNASIETPQQAGTHER 62

Query: 75  PAKQPRTSGSWNNSSTTRQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNYSNVK 134
           PAKQP+   +WN  +T   I + AASSSSSH+ISF NS+SS P +S +  G+  N   +K
Sbjct: 63  PAKQPKNHTTWNPCTTDHTIMAKAASSSSSHLISFDNSNSSPPTSSQQFYGTLDN--TMK 122

Query: 135 PKFEIG-CEGNIDLSSVIPQGSYENNPNCSPKYDGVGMKRGASAMNYRSALVAQDHVIAE 194
           PK E+    G ++L+++I QGSY+    CSPK+ G G+KR A+    RS L AQDHV+AE
Sbjct: 123 PKNEVEYSNGKLNLTTLISQGSYDPQ-TCSPKH-GQGIKRAATVT--RSPLHAQDHVLAE 182

Query: 195 RKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKSRVESVV 254
           RKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER K+ +E+A K  VE+VV
Sbjct: 183 RKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKHLQERTKMLEEKAVKKTVEAVV 242

Query: 255 VVNRSEDVSAVVEDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGCLSNMLNH 314
            V R++  SA  +  SS+EN  SSSD+ +PEIEARVS K+VL+++H +K KGCL+ +L+ 
Sbjct: 243 FVKRTQ-YSADDDISSSDENFESSSDQPLPEIEARVSDKEVLIRVHCEKTKGCLAKILSE 302

Query: 315 IEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQ 344
           IE L+LT++NSS LPFGN  +DIT+IA+M   FSMTV +LV+ LRQ
Sbjct: 303 IESLDLTIVNSSVLPFGNSTLDITVIAQMDAEFSMTVKDLVKNLRQ 341

[Close]

BLAST of CmaCh03G008680 vs. NCBI nr
Match: gi|764517173|ref|XP_011466489.1| (PREDICTED: transcription factor bHLH18-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 184/358 (51.40%), Postives = 253/358 (70.67%), Query Frame = 1


Query: 3   ISSAKWLSDMDLES-AFMEDFEMN-PFECTLDELSFQTFSDESHTSHLDLENSVQTPPPP 62
           ISSAKW+S++++E   F+  +EMN   + +L++L+F++ S ES++S+ D           
Sbjct: 4   ISSAKWVSELEMEDPTFLNQYEMNFHLDYSLEDLNFRSLSAESYSSYPDFTPPQNDVDER 63

Query: 63  PAKQPRTSGS-WNNSSTT---RQIASMAASSSSSHIISFGNSHSSSPPASNKLVGSNGNY 122
           PAKQP+ + S WN+ +TT   +     A+SS+SSH+ISF NS+SS+        GS    
Sbjct: 64  PAKQPKNNHSNWNSCTTTHDHKTTVPRASSSASSHLISFDNSNSSA-------YGSLDCT 123

Query: 123 SNVKPKFEI-GCEGNID-LSSVIPQGSYENNPNCSP-KYDGVGMKRGASAMNYRSALVAQ 182
           + VKPK E+ G  GN++ + ++I QG+  +   CSP +  G G+KR A+    RS L AQ
Sbjct: 124 TTVKPKNEVQGSGGNLNSIPTLISQGNSYDPQTCSPNRAYGQGIKRAATVT--RSPLHAQ 183

Query: 183 DHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAIAYIKDLQERLKVADEEAAKS 242
           DHV+AERKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER+K+ +E+AAK 
Sbjct: 184 DHVLAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKQLQERMKILEEQAAKK 243

Query: 243 RVESVVVVNRSEDVSAVVEDDSSEEN--SSSDRAIPEIEARVSGKDVLLKIHGKKCKGCL 302
            VESVV V R++  SA  +  SS+EN  S SD+ +PEIEARVS K+VL++IH +K KGCL
Sbjct: 244 TVESVVFVKRTQ-YSADDDISSSDENFDSCSDQPLPEIEARVSDKEVLIRIHCEKKKGCL 303

Query: 303 SNMLNHIEELNLTVLNSSALPFGNFRIDITIIAKMGDGFSMTVTELVQKLRQACLQFV 350
           +N+L+ IE LNLT+LNSS LPFGN  +DIT++++M   +SMTV ELV KLRQA L+ V
Sbjct: 304 ANILHEIERLNLTILNSSFLPFGNSTLDITVVSQMDVEYSMTVKELVSKLRQALLKLV 351

The following BLAST results are available for this feature:

BLAST of CmaCh03G008680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH025_ARATH	7.6e-37	36.94	Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2	[more]
BH018_ARATH	6.4e-36	47.71	Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1	[more]
BH019_ARATH	3.2e-35	45.27	Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1	[more]
BH020_ARATH	9.6e-32	39.26	Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1	[more]
MYC4_ARATH	3.1e-14	29.79	Transcription factor MYC4 OS=Arabidopsis thaliana GN=MYC4 PE=1 SV=1	[more]

BLAST of CmaCh03G008680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG27_CUCSA	1.8e-106	67.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497110 PE=4 SV=1	[more]
M5WL55_PRUPE	1.6e-73	51.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017640mg PE=4 SV=1	[more]
W9RQB0_9ROSA	2.1e-62	45.00	Uncharacterized protein OS=Morus notabilis GN=L484_016091 PE=4 SV=1	[more]
A0A061DHY3_THECC	9.9e-60	47.85	Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca...	[more]
A0A0D2QXV7_GOSRA	1.6e-57	44.74	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G228900 PE=4 SV=1	[more]

BLAST of CmaCh03G008680 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37850.1	4.3e-38	36.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	3.6e-37	47.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22760.1	1.8e-36	45.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	5.4e-33	39.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G17880.1	1.7e-15	29.79	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

BLAST of CmaCh03G008680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451351\|ref\|XP_004143425.1\|	2.6e-106	67.69	PREDICTED: transcription factor bHLH18-like [Cucumis sativus]	[more]
gi\|659079831\|ref\|XP_008440467.1\|	3.8e-105	68.44	PREDICTED: transcription factor bHLH18-like [Cucumis melo]	[more]
gi\|645219682\|ref\|XP_008236887.1\|	2.8e-76	50.41	PREDICTED: transcription factor bHLH25-like [Prunus mume]	[more]
gi\|595831834\|ref\|XP_007206351.1\|	2.3e-73	51.45	hypothetical protein PRUPE_ppa017640mg [Prunus persica]	[more]
gi\|764517173\|ref\|XP_011466489.1\|	1.5e-72	51.40	PREDICTED: transcription factor bHLH18-like [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008680.1	CmaCh03G008680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 174..232 score: 1.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 174..220 score: 5.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 176..225 score: 2.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 170..219 score: 15
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 175..234 score: 7.98
None	No IPR available	unknown	Coil	Coil	coord: 216..236 scor
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 159..344 score: 1.1E-87coord: 1..53 score: 1.1E-87coord: 97..121 score: 1.1
None	No IPR available	PANTHER	PTHR23042:SF61	TRANSCRIPTION FACTOR BHLH18-RELATED	coord: 97..121 score: 1.1E-87coord: 1..53 score: 1.1E-87coord: 159..344 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G008680	Cucsa.103620	Cucumber (Gy14) v1	cgycmaB0231
CmaCh03G008680	CsGy6G028930	Cucumber (Gy14) v2	cgybcmaB831

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G008680	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh03G008680	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G008680	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G008680	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G008680	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G008680	Melon (DHL92) v3.5.1	cmameB617
CmaCh03G008680	Watermelon (Charleston Gray)	cmawcgB579
CmaCh03G008680	Watermelon (97103) v1	cmawmB632
CmaCh03G008680	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G008680	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G008680	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G008680	Melon (DHL92) v3.6.1	cmamedB703
CmaCh03G008680	Silver-seed gourd	carcmaB0003
CmaCh03G008680	Silver-seed gourd	carcmaB0567
CmaCh03G008680	Cucumber (Chinese Long) v3	cmacucB0809
CmaCh03G008680	Wax gourd	cmawgoB0798
CmaCh03G008680	Watermelon (97103) v2	cmawmbB670