CsGy6G028540 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G028540
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionVQ motif-containing protein, putative
LocationChr6 : 27384965 .. 27385471 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAATTTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAACCGGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGTCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

mRNA sequence

ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAATTTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAACCGGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGTCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Coding sequence (CDS)

ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAATTTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAACCGGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGTCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Protein sequence

MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREFSSYSNNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAVVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Homology
[Close]
BLAST of CsGy6G028540 vs. NCBI nr
Match: XP_011657908.1 (PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus] >KGN48627.1 hypothetical protein Csa_6G495810 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 5.4e-77
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREFSSYSNNNIHCVRKPMAKPWKKPAIA 60
           MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKRE SSYSNNNIHCVRKPM KPWKKPAIA
Sbjct: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAVVEDTV 120
           PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSA VEDTV
Sbjct: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120

Query: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]
BLAST of CsGy6G028540 vs. NCBI nr
Match: XP_008440419.1 (PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo])

HSP 1 Score: 254.2 bits (648), Expect = 3.1e-64
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0 

Query: 43  IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP 102
           IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP
Sbjct: 45  IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP 104

Query: 103 LDISRRQDSCSAVVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL 162
           LDISRRQD+CSA VEDTVFKAS LLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL
Sbjct: 105 LDISRRQDACSAAVEDTVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL 164

Query: 163 AILDAI 169
           AILDAI
Sbjct: 165 AILDAI 170

[Close]
BLAST of CsGy6G028540 vs. NCBI nr
Match: XP_022950153.1 (uncharacterized protein LOC111453330 [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 6.8e-56
Identity = 133/169 (78.70%), Postives = 145/169 (85.80%), Query Frame = 0 

Query: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREFSSYSNNNIHCVRKPMAKPWKKPAIA 60
           M+AFCAYT  XXXXXXXXXXXXXX  + + V+REFSSYSNNN+HCVRK MAKPWKKPAIA
Sbjct: 3   MEAFCAYT--XXXXXXXXXXXXXXRDQSEDVRREFSSYSNNNLHCVRKSMAKPWKKPAIA 62

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAVVEDTV 120
           PLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDI+R   S  AVVE + 
Sbjct: 63  PLPPTRPRVYKVDPLNFRNLVQKLTGLAELRSPRLQKMAPPPLDIARCPVSNVAVVEAST 122

Query: 121 FKASSLLKVE-NEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
            +    L V  +EAVDGG FLELNLSPFNKNWCSFPALSPE+LA+LDAI
Sbjct: 123 LQP---LPVRLDEAVDGGSFLELNLSPFNKNWCSFPALSPESLALLDAI 166

[Close]
BLAST of CsGy6G028540 vs. NCBI nr
Match: XP_022977273.1 (uncharacterized protein LOC111477640 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 3.0e-51
Identity = 109/134 (81.34%), Postives = 116/134 (86.57%), Query Frame = 0 

Query: 36  SSYSNNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRL 95
           SSYSNNN+H VRKPMAKPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRL
Sbjct: 28  SSYSNNNLHGVRKPMAKPWKKPAIAPLPPTRPRVYKVDPLNFRNLVQKLTGLAELRSPRL 87

Query: 96  QKMAPPPLDISRRQDSCSAVVEDTVFKASSLLKVE-NEAVDGGGFLELNLSPFNKNWCSF 155
           QKMAPPPLDI+R   S  AVVE +  +    L V  +EAVDGG FLELNLSPFNKNWCSF
Sbjct: 88  QKMAPPPLDIARCPVSNVAVVEASTLQP---LPVRLDEAVDGGSFLELNLSPFNKNWCSF 147

Query: 156 PALSPETLAILDAI 169
           PALSPE+LAILDAI
Sbjct: 148 PALSPESLAILDAI 158

[Close]
BLAST of CsGy6G028540 vs. NCBI nr
Match: XP_023518129.1 (uncharacterized protein LOC111781674 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46
Identity = 119/168 (70.83%), Postives = 134/168 (79.76%), Query Frame = 0 

Query: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREFSSYSNNNIHCVRKPMAKPWKKPAIA 60
           M+AFCAY XXXXXXXXXXX       EH  V+RE SSYS N++ CVRKP++KPWKKPAIA
Sbjct: 1   MEAFCAYAXXXXXXXXXXXPKKKGQSEH--VRREVSSYS-NDLLCVRKPISKPWKKPAIA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAVVEDTV 120
           PLPPTRPRVYKVD + F+ LVQKLTGL EL SPRLQKMAPPPL I+ RQ S +A VE T 
Sbjct: 61  PLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPLHIAPRQGSGTA-VEATP 120

Query: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           F   S +K++ EA+DGG FLELNLSPFNKNW SFPALSP +LAI DAI
Sbjct: 121 FLHPSPVKLD-EALDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI 163

[Close]
BLAST of CsGy6G028540 vs. TAIR10
Match: AT2G22880.1 (VQ motif-containing protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.6e-09
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0 

Query: 40  NNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMA 99
           N+++H  RK  AKPWKKP         P+VY+V+P+NF+ LVQ+LTG  ++     Q  A
Sbjct: 12  NSSLHSTRKQPAKPWKKPVTGLPQRMHPKVYRVEPVNFKELVQRLTGAEDVEQEVHQVEA 71

Query: 100 PP 102
            P
Sbjct: 72  KP 73

[Close]
BLAST of CsGy6G028540 vs. TAIR10
Match: AT4G37710.1 (VQ motif-containing protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-08
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 42 NIHCVRKPMAKPWKKPAI-APLPPTRPRVYKVDPINFRGLVQKLTGLAE 90
          ++H  RK  +KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E
Sbjct: 30 SLHSTRKQPSKPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTGAPE 78

[Close]
BLAST of CsGy6G028540 vs. Swiss-Prot
Match: sp|Q9SZG3|VQ29_ARATH (VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 42 NIHCVRKPMAKPWKKPAI-APLPPTRPRVYKVDPINFRGLVQKLTGLAE 90
          ++H  RK  +KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E
Sbjct: 30 SLHSTRKQPSKPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTGAPE 78

[Close]
BLAST of CsGy6G028540 vs. TrEMBL
Match: tr|A0A0A0KJR2|A0A0A0KJR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.6e-77
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREFSSYSNNNIHCVRKPMAKPWKKPAIA 60
           MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKRE SSYSNNNIHCVRKPM KPWKKPAIA
Sbjct: 1   MDAFCAYTXXXXXXXXXXXXXXXXXXEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAVVEDTV 120
           PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSA VEDTV
Sbjct: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120

Query: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]
BLAST of CsGy6G028540 vs. TrEMBL
Match: tr|A0A1S3B142|A0A1S3B142_CUCME (uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.0e-64
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0 

Query: 43  IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP 102
           IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP
Sbjct: 45  IHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPP 104

Query: 103 LDISRRQDSCSAVVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL 162
           LDISRRQD+CSA VEDTVFKAS LLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL
Sbjct: 105 LDISRRQDACSAAVEDTVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL 164

Query: 163 AILDAI 169
           AILDAI
Sbjct: 165 AILDAI 170

[Close]
BLAST of CsGy6G028540 vs. TrEMBL
Match: tr|A0A2I4E2D8|A0A2I4E2D8_9ROSI (uncharacterized protein LOC108985643 OS=Juglans regia OX=51240 GN=LOC108985643 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-25
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 0 

Query: 38  YSNNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAEL-RSPRLQ 97
           + ++++H VRK MAKPWKKP +APLPPT PR+YKVDPINFRGLVQKLTG AEL RS  LQ
Sbjct: 29  FHSSSLHTVRKSMAKPWKKP-VAPLPPTPPRIYKVDPINFRGLVQKLTGAAELDRSRLLQ 88

Query: 98  KMAPPPLDI-SRRQDSCSAVVEDTVFKASSL-----LKVENEAVDGGGFLELNLSPFNKN 157
            +APPPL++ S  + +  AV     F   +L      KV  E  +    L +N+SP ++N
Sbjct: 89  SVAPPPLEVGSTEKPTFCAVEYQRDFTPGALETKQGQKVSTENKEATFSLGMNMSPSSQN 148

Query: 158 WCSFPALSPETLAILD 167
           W SFP  SP +L+ L+
Sbjct: 149 WFSFPLFSPGSLSTLE 163

[Close]
BLAST of CsGy6G028540 vs. TrEMBL
Match: tr|A0A2P6RPB8|A0A2P6RPB8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0108511 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24
Identity = 70/156 (44.87%), Postives = 90/156 (57.69%), Query Frame = 0 

Query: 38  YSNNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAE-----LRS 97
           Y ++++H V+K  AKPW+KPA+APLPPT PRVYKVDPINFRGLVQKLT   E      RS
Sbjct: 20  YHHSSLHSVKKNSAKPWRKPAVAPLPPTPPRVYKVDPINFRGLVQKLTSAPEYLNEPTRS 79

Query: 98  PRLQKMAPPPLDISRRQDSCSAVVEDTVFKASSLLKV-----------------ENEAVD 157
             LQ +APPP++I R      + V   V  ++S   V                 + +AVD
Sbjct: 80  TNLQSVAPPPIEIQRGPPHVPSPVSAKVTGSTSPFSVMYKDLAETLGLSSTPHHQKKAVD 139

Query: 158 -----GGGFLELNLSPFNKNWCSFPALSPETLAILD 167
                   +L LNLSP +++W SFP LSP TL  L+
Sbjct: 140 QNITGDSSYLRLNLSPASQHWLSFPMLSPGTLTSLE 175

[Close]
BLAST of CsGy6G028540 vs. TrEMBL
Match: tr|A0A061DH87|A0A061DH87_THECC (VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000826 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.0e-24
Identity = 70/146 (47.95%), Postives = 86/146 (58.90%), Query Frame = 0 

Query: 42  NIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRS--------- 101
           ++H VRKP+AKPWKKP IAPLPPT PRVYKVDPINFR LVQKLTG  E  S         
Sbjct: 29  SLHEVRKPLAKPWKKP-IAPLPPTPPRVYKVDPINFRDLVQKLTGAPEFMSQSQSSSQLQ 88

Query: 102 ----PRLQKMAPPPLDISRRQDSCSAVVE--------DTVFKASSLLKVENEAVDGGGFL 161
                RLQ++APPPL ++    S + V          D   K  +   ++N  +     L
Sbjct: 89  LPHHQRLQRVAPPPLSVASSPLSRAEVSAQLHLLSGFDHSAKTQNQKFLDNAKITSNSSL 148

Query: 162 ELNLSPFNKNWCSFPALSPETLAILD 167
            LNLSP + NWC+FP LSP TL+ L+
Sbjct: 149 GLNLSPSSYNWCAFPILSPGTLSSLE 173

The following BLAST results are available for this feature:
BLAST of CsGy6G028540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657908.15.4e-7798.21PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus] >KGN48627.1 hy... [more]
XP_008440419.13.1e-6497.62PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo][more]
XP_022950153.16.8e-5678.70uncharacterized protein LOC111453330 [Cucurbita moschata][more]
XP_022977273.13.0e-5181.34uncharacterized protein LOC111477640 [Cucurbita maxima][more]
XP_023518129.12.2e-4670.83uncharacterized protein LOC111781674 [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy6G028540 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22880.17.6e-0943.55VQ motif-containing protein[more]
AT4G37710.12.9e-0853.06VQ motif-containing protein[more]
BLAST of CsGy6G028540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZG3|VQ29_ARATH5.2e-0753.06VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=2 SV=1[more]
BLAST of CsGy6G028540 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJR2|A0A0A0KJR2_CUCSA3.6e-7798.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1[more]
tr|A0A1S3B142|A0A1S3B142_CUCME2.0e-6497.62uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=... [more]
tr|A0A2I4E2D8|A0A2I4E2D8_9ROSI2.4e-2551.47uncharacterized protein LOC108985643 OS=Juglans regia OX=51240 GN=LOC108985643 P... [more]
tr|A0A2P6RPB8|A0A2P6RPB8_ROSCH1.6e-2444.87Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0108511 PE=4... [more]
tr|A0A061DH87|A0A061DH87_THECC6.0e-2447.95VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000826 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G028540.1CsGy6G028540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 67..87
e-value: 3.6E-7
score: 29.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR34794FAMILY NOT NAMEDcoord: 8..165
NoneNo IPR availablePANTHERPTHR34794:SF1VQ MOTIF-CONTAINING PROTEIN 29coord: 8..165

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G028540Cla014043Watermelon (97103) v1cgybwmB468
CsGy6G028540Csa6G495810Cucumber (Chinese Long) v2cgybcuB281
CsGy6G028540MELO3C007650Melon (DHL92) v3.5.1cgybmeB444
CsGy6G028540ClCG01G017720Watermelon (Charleston Gray)cgybwcgB399
CsGy6G028540CSPI06G29060Wild cucumber (PI 183967)cgybcpiB287
CsGy6G028540CmaCh03G009010Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G028540CmoCh03G009450Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G028540Lsi01G008780Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G028540Cp4.1LG10g01930Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G028540Cp4.1LG19g10580Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G028540MELO3C007650.2Melon (DHL92) v3.6.1cgybmedB440
CsGy6G028540CsaV3_6G044250Cucumber (Chinese Long) v3cgybcucB298
CsGy6G028540Cla97C01G016890Watermelon (97103) v2cgybwmbB394
CsGy6G028540Bhi03G000807Wax gourdcgybwgoB591
CsGy6G028540Carg00778Silver-seed gourdcarcgybB0418
CsGy6G028540Carg18536Silver-seed gourdcarcgybB0003
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G028540Cucumber (Gy14) v2cgybcgybB064
CsGy6G028540Cucumber (Gy14) v2cgybcgybB129
CsGy6G028540Cucurbita maxima (Rimu)cgybcmaB699
CsGy6G028540Cucurbita maxima (Rimu)cgybcmaB715
CsGy6G028540Cucurbita maxima (Rimu)cgybcmaB843
CsGy6G028540Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G028540Cucurbita moschata (Rifu)cgybcmoB682
CsGy6G028540Cucurbita moschata (Rifu)cgybcmoB699
CsGy6G028540Cucurbita moschata (Rifu)cgybcmoB822
CsGy6G028540Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G028540Cucurbita pepo (Zucchini)cgybcpeB805
CsGy6G028540Cucurbita pepo (Zucchini)cgybcpeB870
CsGy6G028540Cucurbita pepo (Zucchini)cgybcpeB876
CsGy6G028540Cucumber (Chinese Long) v2cgybcuB249
CsGy6G028540Cucumber (Chinese Long) v2cgybcuB269
CsGy6G028540Bottle gourd (USVL1VR-Ls)cgyblsiB425
CsGy6G028540Bottle gourd (USVL1VR-Ls)cgyblsiB441
CsGy6G028540Melon (DHL92) v3.5.1cgybmeB412
CsGy6G028540Melon (DHL92) v3.5.1cgybmeB443
CsGy6G028540Melon (DHL92) v3.6.1cgybmedB410
CsGy6G028540Melon (DHL92) v3.6.1cgybmedB439
CsGy6G028540Watermelon (Charleston Gray)cgybwcgB461
CsGy6G028540Watermelon (97103) v1cgybwmB432
CsGy6G028540Wild cucumber (PI 183967)cgybcpiB257
CsGy6G028540Wild cucumber (PI 183967)cgybcpiB276
CsGy6G028540Silver-seed gourdcarcgybB0388
CsGy6G028540Cucumber (Chinese Long) v3cgybcucB262
CsGy6G028540Cucumber (Chinese Long) v3cgybcucB284
CsGy6G028540Watermelon (97103) v2cgybwmbB470
CsGy6G028540Wax gourdcgybwgoB548