CsaV3_6G044250 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G044250
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	VQ motif-containing protein, putative
Location	chr6 : 26136598 .. 26138896 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATAGGAATAGGCAAATCTAAACATGATATTTTTAGAATTTATCATCTGTTTTCGAAATTGTTCTCGTAAATATTTTGCAGTTTTTGTTCTACTTTTTTAAAAGATCCATTTCACTCGTTTCTTGTTTTTGCATTTTTTTTATGGATGATATTTAATTAAGTTAGTTTTGATTATGGTTGAATTGGATTTAATTTTTCCTTTATCAAGTCCATTCTCCAAACATATGATAGAAACACAATTATTTACTCATTATCATTTTCTAAAACTCTTAATACGTGGTTTAACATGTTTTTTTTACATAAAAGTATAAAAGTACGAAATTTTGTAATATTTGTCAGGTACGAAAGAAAGACGACTTAGCTCCCTAAGTTTATACTCTCAACTCCAATCCTACTTAGATCTATACTAATTTTGTGTGTGTTATCCAAGTATTATACAAAGTGTGTTACCAACTAAACGAGTTAATTAGAGGGTTGTCATTCAAATCTTCCTACTGTTATTGTATTAATAAAAAAAAACAATAGTTTGGATCATATATAATCTTTTAATGATATTCTTCTTATTCATTACTTCTACCATTGAAAAACCGTCACTTTCAACATTTGCTTTGCTTTACCCTTCTTTTTCTGTCCACACTCATGGATGGATTTTGTTTGGTCTTGAAAAAATGTATCTGTCTCATACCAACTAGTTCAACTTATTTGACTAAAAATAAAATTGTATAAAGTATTGCTTTTACTTGGGAAATTTATCAGCTTAATGAATAGTGTAATCTCAATACACCAAGAATAAAATACACATCTTTGATGATTAATCAGCCCACTTTTTTTAACAAAATACAATTCATCCTAATCTAAAGCTAAATATTTAACAGTTAATTAACCTAACATCCTAAATTAAAAAACTACATCCTTACAGAACATTCCAAATATCTGGGAGTTGAGTAAATTATATAAGAAAAAAAAAAATTCTCAACTTGCACCATTCTTCTGAATATGATAATAATAACAATAATTTTTAAGAGTAAAATATTTAATTAGAGGTGAGAAAGAAAGTGAAAGTCCAAATTCAATGTCCACTATTAAAGATAAGTTATTTATAAGTAAAATTGCATCACATAATCTTGAGGAGATCGTTGTTCATAATCTCAACCAAAAGTTTTGCAATCAATGATAGTCAAACCTCCAATCCCAGTTCTATTTTAATTATTAAACCCATATTTTTTATAATAATTAAGAAAGTTATGGATGTTATTATAATTTATATGGAAGAAAATAACAAAATAGAGGCGGCTGAGCTGCTAGCCTGCTCCCCTTGTTTTGTTAATAAACCCTTCTCCAGCTACACCCTTCCCTCCCATACACTAATCTCAAGTTATCCTAATTTTATGAAAAATGATTACCAATCTCTAGTACATTTTTATTATATTTTGTAAACCTTTTGATTTATTATGTGGTATATAAAAAGGGTCCTAATTTTATTTTATTTTATTTCAATTTTGCTTAAACCCACTTCATTAGTACATTATGAGAGGGTCCACAACTCCCAATTGTTGAATAATTTGAAGTCAAATTATTGGCTTTGACTATTTTTAAATACTTTTTTTTTCTTAGTGCCCATTTCCCCGCCTACGTTAGATGACAAATTGACAAAAAGGCAGATATTTGAATGTTTGACTTCATGTTTTTGGGCAGTTTCAAATTCTTTATATAAATGCTACTTTTTTTTTTGTTTTTTTGGGTTATAATTTCACTTGGATTTGAGTTTGTTTTAAAAGAAAGGAGGATATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAGATTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

mRNA sequence

ATGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Coding sequence (CDS)

ATGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Protein sequence

MPMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI

Homology

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BLAST of CsaV3_6G044250 vs. NCBI nr
Match: XP_011657908.1 (PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus] >KGN48627.1 hypothetical protein Csa_6G495810 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 61
           PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR
Sbjct: 49  PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 108

Query: 62  QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 121
           QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 109 QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]

BLAST of CsaV3_6G044250 vs. NCBI nr
Match: XP_008440419.1 (PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 4.3e-60
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 61
           PM KPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR
Sbjct: 51  PMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 110

Query: 62  QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 121
           QD+CSAAVEDTVFKAS LLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 111 QDACSAAVEDTVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 170

[Close]

BLAST of CsaV3_6G044250 vs. NCBI nr
Match: XP_022977273.1 (uncharacterized protein LOC111477640 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 96/121 (79.34%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 61
           PM KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDI+R 
Sbjct: 41  PMAKPWKKPAIAPLPPTRPRVYKVDPLNFRNLVQKLTGLAELRSPRLQKMAPPPLDIARC 100

Query: 62  QDSCSAAVEDTVFKASSLLKVE-NEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDA 121
             S  A VE +  +    L V  +EAVDGG FLELNLSPFNKNWCSFPALSPE+LAILDA
Sbjct: 101 PVSNVAVVEASTLQP---LPVRLDEAVDGGSFLELNLSPFNKNWCSFPALSPESLAILDA 158

[Close]

BLAST of CsaV3_6G044250 vs. NCBI nr
Match: XP_022950153.1 (uncharacterized protein LOC111453330 [Cucurbita moschata])

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 94/120 (78.33%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 3   MVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQ 62
           M KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDI+R  
Sbjct: 50  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRNLVQKLTGLAELRSPRLQKMAPPPLDIARCP 109

Query: 63  DSCSAAVEDTVFKASSLLKVE-NEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 122
            S  A VE +  +    L V  +EAVDGG FLELNLSPFNKNWCSFPALSPE+LA+LDAI
Sbjct: 110 VSNVAVVEASTLQP---LPVRLDEAVDGGSFLELNLSPFNKNWCSFPALSPESLALLDAI 166

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BLAST of CsaV3_6G044250 vs. NCBI nr
Match: XP_023543043.1 (uncharacterized protein LOC111803028 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-42
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 3   MVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQ 62
           M KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELR PRLQKMAPPPLDI+R  
Sbjct: 1   MAKPWKKPAIAPLPPTRPRVYKVDPLNFRNLVQKLTGLAELRPPRLQKMAPPPLDIARCP 60

Query: 63  DSCSAAVEDTVFKASSLLKVE-NEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 122
            S  A VE +  +    L V  +EAVDGG FLELNLSPFNKNWCSFPALSPE+LAILDAI
Sbjct: 61  VSNVAVVEASTLQP---LPVRLDEAVDGGSFLELNLSPFNKNWCSFPALSPESLAILDAI 117

[Close]

BLAST of CsaV3_6G044250 vs. TAIR10
Match: AT4G37710.1 (VQ motif-containing protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 5   KPWKKPAI-APLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQD 64
           KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E  + + + +     D + +Q 
Sbjct: 40  KPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTGAPEHETVQAKPLKTS--DDAAKQS 99

Query: 65  SCSAAVE 71
           S S A +
Sbjct: 100 SSSFAFD 104

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BLAST of CsaV3_6G044250 vs. TAIR10
Match: AT2G22880.1 (VQ motif-containing protein)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 5  KPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPP 55
          KPWKKP         P+VY+V+P+NF+ LVQ+LTG  ++     Q  A P
Sbjct: 24 KPWKKPVTGLPQRMHPKVYRVEPVNFKELVQRLTGAEDVEQEVHQVEAKP 73

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BLAST of CsaV3_6G044250 vs. Swiss-Prot
Match: sp|Q9SZG3|VQ29_ARATH (VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-04
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 5   KPWKKPAI-APLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQD 64
           KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E  + + + +     D + +Q 
Sbjct: 40  KPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTGAPEHETVQAKPLKTS--DDAAKQS 99

Query: 65  SCSAAVE 71
           S S A +
Sbjct: 100 SSSFAFD 104

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BLAST of CsaV3_6G044250 vs. TrEMBL
Match: tr|A0A0A0KJR2|A0A0A0KJR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 61
           PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR
Sbjct: 49  PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 108

Query: 62  QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 121
           QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 109 QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]

BLAST of CsaV3_6G044250 vs. TrEMBL
Match: tr|A0A1S3B142|A0A1S3B142_CUCME (uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-60
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 61
           PM KPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR
Sbjct: 51  PMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRR 110

Query: 62  QDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 121
           QD+CSAAVEDTVFKAS LLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 111 QDACSAAVEDTVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 170

[Close]

BLAST of CsaV3_6G044250 vs. TrEMBL
Match: tr|A0A2I4E2D8|A0A2I4E2D8_9ROSI (uncharacterized protein LOC108985643 OS=Juglans regia OX=51240 GN=LOC108985643 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-22
Identity = 63/124 (50.81%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 3   MVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAEL-RSPRLQKMAPPPLDISRR 62
           M KPWKKP +APLPPT PR+YKVDPINFRGLVQKLTG AEL RS  LQ +APPPL++   
Sbjct: 41  MAKPWKKP-VAPLPPTPPRIYKVDPINFRGLVQKLTGAAELDRSRLLQSVAPPPLEVGST 100

Query: 63  QDSCSAAVE------DTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETL 120
           +     AVE          +     KV  E  +    L +N+SP ++NW SFP  SP +L
Sbjct: 101 EKPTFCAVEYQRDFTPGALETKQGQKVSTENKEATFSLGMNMSPSSQNWFSFPLFSPGSL 160

[Close]

BLAST of CsaV3_6G044250 vs. TrEMBL
Match: tr|A0A2P6RPB8|A0A2P6RPB8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0108511 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-21
Identity = 65/142 (45.77%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 5   KPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAE-----LRSPRLQKMAPPPLDIS 64
           KPW+KPA+APLPPT PRVYKVDPINFRGLVQKLT   E      RS  LQ +APPP++I 
Sbjct: 34  KPWRKPAVAPLPPTPPRVYKVDPINFRGLVQKLTSAPEYLNEPTRSTNLQSVAPPPIEIQ 93

Query: 65  RRQDSCSAAVEDTVFKASSLLKV-----------------ENEAVD-----GGGFLELNL 120
           R      + V   V  ++S   V                 + +AVD        +L LNL
Sbjct: 94  RGPPHVPSPVSAKVTGSTSPFSVMYKDLAETLGLSSTPHHQKKAVDQNITGDSSYLRLNL 153

[Close]

BLAST of CsaV3_6G044250 vs. TrEMBL
Match: tr|A0A061DH87|A0A061DH87_THECC (VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000826 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 66/139 (47.48%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 2   PMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRS-------------PRL 61
           P+ KPWKKP IAPLPPT PRVYKVDPINFR LVQKLTG  E  S              RL
Sbjct: 36  PLAKPWKKP-IAPLPPTPPRVYKVDPINFRDLVQKLTGAPEFMSQSQSSSQLQLPHHQRL 95

Query: 62  QKMAPPPLDI-----SRRQDSCSAAV---EDTVFKASSLLKVENEAVDGGGFLELNLSPF 120
           Q++APPPL +     SR + S    +    D   K  +   ++N  +     L LNLSP 
Sbjct: 96  QRVAPPPLSVASSPLSRAEVSAQLHLLSGFDHSAKTQNQKFLDNAKITSNSSLGLNLSPS 155

The following BLAST results are available for this feature:

BLAST of CsaV3_6G044250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657908.1	1.8e-61	100.00	PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus] >KGN48627.1 hy...	[more]
XP_008440419.1	4.3e-60	97.50	PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo]	[more]
XP_022977273.1	1.7e-43	79.34	uncharacterized protein LOC111477640 [Cucurbita maxima]	[more]
XP_022950153.1	1.1e-42	78.33	uncharacterized protein LOC111453330 [Cucurbita moschata]	[more]
XP_023543043.1	2.4e-42	78.33	uncharacterized protein LOC111803028 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G044250 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37710.1	5.7e-06	41.79	VQ motif-containing protein	[more]
AT2G22880.1	1.3e-05	44.00	VQ motif-containing protein	[more]

BLAST of CsaV3_6G044250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZG3\|VQ29_ARATH	1.0e-04	41.79	VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=2 SV=1	[more]

BLAST of CsaV3_6G044250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KJR2\|A0A0A0KJR2_CUCSA	1.2e-61	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1	[more]
tr\|A0A1S3B142\|A0A1S3B142_CUCME	2.9e-60	97.50	uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=...	[more]
tr\|A0A2I4E2D8\|A0A2I4E2D8_9ROSI	4.0e-22	50.81	uncharacterized protein LOC108985643 OS=Juglans regia OX=51240 GN=LOC108985643 P...	[more]
tr\|A0A2P6RPB8\|A0A2P6RPB8_ROSCH	2.6e-21	45.77	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0108511 PE=4...	[more]
tr\|A0A061DH87\|A0A061DH87_THECC	1.0e-20	47.48	VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000826 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G044250.1	CsaV3_6G044250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 20..40 e-value: 2.2E-7 score: 30.1
None	No IPR available	PANTHER	PTHR34794	FAMILY NOT NAMED	coord: 4..118
None	No IPR available	PANTHER	PTHR34794:SF1	VQ MOTIF-CONTAINING PROTEIN 29	coord: 4..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G044250	CSPI06G29060	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G044250	Cucsa.103330	Cucumber (Gy14) v1	cgycucB126
CsaV3_6G044250	CmaCh03G009010	Cucurbita maxima (Rimu)	cmacucB0809
CsaV3_6G044250	CmoCh03G009450	Cucurbita moschata (Rifu)	cmocucB0793
CsaV3_6G044250	Cp4.1LG19g10580	Cucurbita pepo (Zucchini)	cpecucB0618
CsaV3_6G044250	Cp4.1LG10g01930	Cucurbita pepo (Zucchini)	cpecucB0092
CsaV3_6G044250	CsGy6G028540	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G044250	Carg18536	Silver-seed gourd	carcucB0003
CsaV3_6G044250	Carg00778	Silver-seed gourd	carcucB0442
CsaV3_6G044250	Cla014043	Watermelon (97103) v1	cucwmB526
CsaV3_6G044250	MELO3C007650	Melon (DHL92) v3.5.1	cucmeB517
CsaV3_6G044250	ClCG01G017720	Watermelon (Charleston Gray)	cucwcgB455
CsaV3_6G044250	Lsi01G008780	Bottle gourd (USVL1VR-Ls)	cuclsiB462
CsaV3_6G044250	MELO3C007650.2	Melon (DHL92) v3.6.1	cucmedB505
CsaV3_6G044250	Cla97C01G016890	Watermelon (97103) v2	cucwmbB430
CsaV3_6G044250	Bhi03G000807	Wax gourd	cucwgoB642

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G044250	Cucumber (Chinese Long) v3	cuccucB090
CsaV3_6G044250	Cucumber (Chinese Long) v3	cuccucB178
CsaV3_6G044250	Silver-seed gourd	carcucB0353
CsaV3_6G044250	Silver-seed gourd	carcucB0489
CsaV3_6G044250	Silver-seed gourd	carcucB0812
CsaV3_6G044250	Cucumber (Gy14) v2	cgybcucB087
CsaV3_6G044250	Cucumber (Gy14) v2	cgybcucB193
CsaV3_6G044250	Cucumber (Gy14) v2	cgybcucB188
CsaV3_6G044250	Cucumber (Gy14) v1	cgycucB539
CsaV3_6G044250	Cucumber (Gy14) v1	cgycucB600
CsaV3_6G044250	Cucurbita maxima (Rimu)	cmacucB0041
CsaV3_6G044250	Cucurbita maxima (Rimu)	cmacucB0221
CsaV3_6G044250	Cucurbita maxima (Rimu)	cmacucB0914
CsaV3_6G044250	Cucurbita maxima (Rimu)	cmacucB1035
CsaV3_6G044250	Cucurbita moschata (Rifu)	cmocucB0026
CsaV3_6G044250	Cucurbita moschata (Rifu)	cmocucB0211
CsaV3_6G044250	Cucurbita moschata (Rifu)	cmocucB0573
CsaV3_6G044250	Cucurbita moschata (Rifu)	cmocucB0905
CsaV3_6G044250	Cucurbita moschata (Rifu)	cmocucB1019
CsaV3_6G044250	Cucurbita pepo (Zucchini)	cpecucB0576
CsaV3_6G044250	Cucurbita pepo (Zucchini)	cpecucB0983
CsaV3_6G044250	Cucurbita pepo (Zucchini)	cpecucB1033
CsaV3_6G044250	Wild cucumber (PI 183967)	cpicucB111
CsaV3_6G044250	Wild cucumber (PI 183967)	cpicucB239
CsaV3_6G044250	Bottle gourd (USVL1VR-Ls)	cuclsiB486
CsaV3_6G044250	Bottle gourd (USVL1VR-Ls)	cuclsiB504
CsaV3_6G044250	Melon (DHL92) v3.5.1	cucmeB481
CsaV3_6G044250	Melon (DHL92) v3.5.1	cucmeB516
CsaV3_6G044250	Melon (DHL92) v3.6.1	cucmedB470
CsaV3_6G044250	Melon (DHL92) v3.6.1	cucmedB503
CsaV3_6G044250	Melon (DHL92) v3.6.1	cucmedB504
CsaV3_6G044250	Watermelon (Charleston Gray)	cucwcgB450
CsaV3_6G044250	Watermelon (Charleston Gray)	cucwcgB521
CsaV3_6G044250	Watermelon (97103) v1	cucwmB486
CsaV3_6G044250	Watermelon (97103) v2	cucwmbB512
CsaV3_6G044250	Wax gourd	cucwgoB596