Csa6G495810 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G495810
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	VQ motif-containing protein; contains IPR008889 (VQ)
Location	Chr6 : 24113317 .. 24113823 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAGATTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

mRNA sequence

ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAGATTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Coding sequence (CDS)

ATGGATGCGTTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTTTTGGCTAAAAAAAACGACCAATCTGAGCATCAAAGTGTGAAGAGGGAGATTTCGAGTTATTCTAATAACAATATTCATTGTGTTCGGAAGCCGATGGTGAAGCCGTGGAAGAAACCAGCGATTGCGCCACTGCCACCTACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGTTTGGCTGAACTCCGATCTCCACGGCTTCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGACGCCAAGACTCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGTCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGGGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCATTGAGTCCTGAGACTTTGGCCATTTTGGATGCAATTTAG

Protein sequence

MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI*

Homology

[Close]

BLAST of Csa6G495810 vs. Swiss-Prot
Match: VQ29_ARATH (VQ motif-containing protein 29 OS=Arabidopsis thaliana GN=VQ29 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 42  NIHCVRKPMVKPWKKPAIA-PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAP 101
           ++H  RK   KP K+PAI+ PL P  P VY+V+P+NF+ LVQ+LTG     +P  + +  
Sbjct: 30  SLHSTRKQPSKPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTG-----APEHETVQA 89

Query: 102 PPL---DISRRQDSCSAAVE 118
            PL   D + +Q S S A +
Sbjct: 90  KPLKTSDDAAKQSSSSFAFD 104

[Close]

BLAST of Csa6G495810 vs. TrEMBL
Match: A0A0A0KJR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495810 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.6e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60
           MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA
Sbjct: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120
           PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV
Sbjct: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120

Query: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]

BLAST of Csa6G495810 vs. TrEMBL
Match: B9HFZ4_POPTR (VQ motif-containing family protein OS=Populus trichocarpa GN=POPTR_0007s14810g PE=4 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-25
Identity = 78/189 (41.27%), Postives = 107/189 (56.61%), Query Frame = 1


Query: 6   AYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIAPLPPT 65
           AY SS+S ++SS +  K    E + +K   S + +  +H +RKP +KP KKP IAPLPPT
Sbjct: 3   AYNSSTSLTTSSSMYSKQYSEETKGLKMPQSYHLS--LHSIRKPQMKPCKKP-IAPLPPT 62

Query: 66  RPRVYKVDPINFRGLVQKLTGLAE-------LRSPRLQKMAPPPLDISR----------- 125
            PRVYKVDPINFR LVQKLTG  E          PRLQ +APPPLD+++           
Sbjct: 63  PPRVYKVDPINFRDLVQKLTGAPEPEPVPEPQHQPRLQSVAPPPLDLAKPTLYGRDFSAV 122

Query: 126 --------RQDSCSAAVEDTVFKASSL--LKVENEAVDGGGFLELNLSPFNKNWCSFPAL 167
                    +   SA  ++ + ++  +   K+ +  +     LELNLSP ++ WCSFP L
Sbjct: 123 PLQLLPSPAKTPLSALYQELMSESLDVKPKKISDSLMAVSSSLELNLSPSSRAWCSFPLL 182

[Close]

BLAST of Csa6G495810 vs. TrEMBL
Match: A0A067K775_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12557 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.5e-25
Identity = 78/181 (43.09%), Postives = 110/181 (60.77%), Query Frame = 1


Query: 7   YTSSSSSSSSSFLAKKNDQSEHQSVKR--EISSYSNNNIHCVRKPMVKPWKKPAIAPLPP 66
           Y+S+SSSSSSS  +   + S++Q  ++  +IS   ++++   RKP +KPWKKP IAPLPP
Sbjct: 4   YSSNSSSSSSSSSSAPMNLSKYQQEQKGVKISQSFHSSLRSTRKPPMKPWKKP-IAPLPP 63

Query: 67  TRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISR---------RQDSCSAA 126
           T P+VYKVDP+NFR LVQKLTG  E  S RLQ++APPPL++ +         R+ + +AA
Sbjct: 64  TPPKVYKVDPMNFRDLVQKLTGAPEQSSQRLQRVAPPPLELEKEKPAAALFSREIAAAAA 123

Query: 127 VEDTVFKA------SSLLKVENEAVDGGGFL---ELN-LSPFNKNWCSFPALSPETLAIL 167
           V  +  K         L++    + D    L   E + LSP    WCS+P LSP TL+ L
Sbjct: 124 VSCSPVKTPFSGLYQDLMRDTPASADSKMALCSIEFDLLSPSTHAWCSYPLLSPGTLSSL 183

[Close]

BLAST of Csa6G495810 vs. TrEMBL
Match: A0A061DH87_THECC (VQ motif-containing protein, putative OS=Theobroma cacao GN=TCM_000826 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.5e-25
Identity = 81/187 (43.32%), Postives = 102/187 (54.55%), Query Frame = 1


Query: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60
           M+A+ +Y+SSSS+   +    K  Q  H S            +H VRKP+ KPWKKP IA
Sbjct: 1   MEAYSSYSSSSSTLQEA-RGLKVAQPFHAS------------LHEVRKPLAKPWKKP-IA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRS-------------PRLQKMAPPPLDI-- 120
           PLPPT PRVYKVDPINFR LVQKLTG  E  S              RLQ++APPPL +  
Sbjct: 61  PLPPTPPRVYKVDPINFRDLVQKLTGAPEFMSQSQSSSQLQLPHHQRLQRVAPPPLSVAS 120

Query: 121 ---SRRQDSCSAAV---EDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSP 167
              SR + S    +    D   K  +   ++N  +     L LNLSP + NWC+FP LSP
Sbjct: 121 SPLSRAEVSAQLHLLSGFDHSAKTQNQKFLDNAKITSNSSLGLNLSPSSYNWCAFPILSP 173

[Close]

BLAST of Csa6G495810 vs. TrEMBL
Match: B9IBL6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s00870g PE=4 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.5e-24
Identity = 80/189 (42.33%), Postives = 106/189 (56.08%), Query Frame = 1


Query: 8   TSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIAPLPPTRP 67
           +SSSSS +SS +  K    E + +K   S +S+  +H +R+  +KPWKKP IAPLPPT P
Sbjct: 6   SSSSSSLTSSSMYSKQFSEETKGLKMPQSYHSS--LHSIRRTQMKPWKKP-IAPLPPTPP 65

Query: 68  RVYKVDPINFRGLVQKLTGLAELRSP------RLQKMAPPPLDI------SRRQDSCSAA 127
           RVYKVDPINFR LVQKLTG A  + P      RLQ +APPPLD+       R ++  +  
Sbjct: 66  RVYKVDPINFRDLVQKLTG-APKKEPEPEPQSRLQSVAPPPLDLFTPTLFGREREIAAVP 125

Query: 128 VE------DTVFKASSLLKVENEAVDG------------GGFLELNLSPFNKNWCSFPAL 167
           ++       T   AS   ++  E++D                LELNLSP    WCS+P L
Sbjct: 126 LQLLPSPAQTPLSASLYQELMYESLDAKPERMPESIMSVSSSLELNLSPSYHAWCSYPLL 185

[Close]

BLAST of Csa6G495810 vs. TAIR10
Match: AT2G22880.1 (AT2G22880.1 VQ motif-containing protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 42/125 (33.60%), Postives = 60/125 (48.00%), Query Frame = 1


Query: 40  NNNIHCVRKPMVKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMA 99
           N+++H  RK   KPWKKP         P+VY+V+P+NF+ LVQ+LTG AE     + ++ 
Sbjct: 12  NSSLHSTRKQPAKPWKKPVTGLPQRMHPKVYRVEPVNFKELVQRLTG-AEDVEQEVHQVE 71

Query: 100 PPPLDISRRQDSCSAAVEDTVFKASSLLKVENEAVDGGGFLELNLSPFNKN-WCSFPALS 159
             P+ IS   D+ +A  +D  F                     +LSP +   W +FP LS
Sbjct: 72  AKPVKIS--DDTTTA--KDNPF-------------------AFDLSPSSSRFWEAFPLLS 112

Query: 160 PETLA 164
           P  L+
Sbjct: 132 PANLS 112

[Close]

BLAST of Csa6G495810 vs. TAIR10
Match: AT4G37710.1 (AT4G37710.1 VQ motif-containing protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-08
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 42  NIHCVRKPMVKPWKKPAIA-PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAP 101
           ++H  RK   KP K+PAI+ PL P  P VY+V+P+NF+ LVQ+LTG     +P  + +  
Sbjct: 30  SLHSTRKQPSKPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTG-----APEHETVQA 89

Query: 102 PPL---DISRRQDSCSAAVE 118
            PL   D + +Q S S A +
Sbjct: 90  KPLKTSDDAAKQSSSSFAFD 104

[Close]

BLAST of Csa6G495810 vs. NCBI nr
Match: gi|778718761|ref|XP_011657908.1| (PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 3.7e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60
           MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA
Sbjct: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120
           PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV
Sbjct: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVEDTV 120

Query: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 121 FKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 168

[Close]

BLAST of Csa6G495810 vs. NCBI nr
Match: gi|659079743|ref|XP_008440419.1| (PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 9.5e-86
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 1


Query: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNN--IHCVRKPMVKPWKKPA 60
           MDAFCAYTSSSSSSSSSFLAKKNDQSEHQ VKRE S+YSNNN  IHCVRKPM KPWKKPA
Sbjct: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQIVKREFSTYSNNNNNIHCVRKPMAKPWKKPA 60

Query: 61  IAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDSCSAAVED 120
           IAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQD+CSAAVED
Sbjct: 61  IAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDACSAAVED 120

Query: 121 TVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 169
           TVFKAS LLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI
Sbjct: 121 TVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI 170

[Close]

BLAST of Csa6G495810 vs. NCBI nr
Match: gi|566181373|ref|XP_002310889.2| (VQ motif-containing family protein [Populus trichocarpa])

HSP 1 Score: 124.0 bits (310), Expect = 2.5e-25
Identity = 78/189 (41.27%), Postives = 107/189 (56.61%), Query Frame = 1


Query: 6   AYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIAPLPPT 65
           AY SS+S ++SS +  K    E + +K   S + +  +H +RKP +KP KKP IAPLPPT
Sbjct: 3   AYNSSTSLTTSSSMYSKQYSEETKGLKMPQSYHLS--LHSIRKPQMKPCKKP-IAPLPPT 62

Query: 66  RPRVYKVDPINFRGLVQKLTGLAE-------LRSPRLQKMAPPPLDISR----------- 125
            PRVYKVDPINFR LVQKLTG  E          PRLQ +APPPLD+++           
Sbjct: 63  PPRVYKVDPINFRDLVQKLTGAPEPEPVPEPQHQPRLQSVAPPPLDLAKPTLYGRDFSAV 122

Query: 126 --------RQDSCSAAVEDTVFKASSL--LKVENEAVDGGGFLELNLSPFNKNWCSFPAL 167
                    +   SA  ++ + ++  +   K+ +  +     LELNLSP ++ WCSFP L
Sbjct: 123 PLQLLPSPAKTPLSALYQELMSESLDVKPKKISDSLMAVSSSLELNLSPSSRAWCSFPLL 182

[Close]

BLAST of Csa6G495810 vs. NCBI nr
Match: gi|802646022|ref|XP_012079435.1| (PREDICTED: VQ motif-containing protein 9-like [Jatropha curcas])

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-25
Identity = 78/181 (43.09%), Postives = 110/181 (60.77%), Query Frame = 1


Query: 7   YTSSSSSSSSSFLAKKNDQSEHQSVKR--EISSYSNNNIHCVRKPMVKPWKKPAIAPLPP 66
           Y+S+SSSSSSS  +   + S++Q  ++  +IS   ++++   RKP +KPWKKP IAPLPP
Sbjct: 4   YSSNSSSSSSSSSSAPMNLSKYQQEQKGVKISQSFHSSLRSTRKPPMKPWKKP-IAPLPP 63

Query: 67  TRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISR---------RQDSCSAA 126
           T P+VYKVDP+NFR LVQKLTG  E  S RLQ++APPPL++ +         R+ + +AA
Sbjct: 64  TPPKVYKVDPMNFRDLVQKLTGAPEQSSQRLQRVAPPPLELEKEKPAAALFSREIAAAAA 123

Query: 127 VEDTVFKA------SSLLKVENEAVDGGGFL---ELN-LSPFNKNWCSFPALSPETLAIL 167
           V  +  K         L++    + D    L   E + LSP    WCS+P LSP TL+ L
Sbjct: 124 VSCSPVKTPFSGLYQDLMRDTPASADSKMALCSIEFDLLSPSTHAWCSYPLLSPGTLSSL 183

[Close]

BLAST of Csa6G495810 vs. NCBI nr
Match: gi|590705941|ref|XP_007047583.1| (VQ motif-containing protein, putative [Theobroma cacao])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 81/187 (43.32%), Postives = 102/187 (54.55%), Query Frame = 1


Query: 1   MDAFCAYTSSSSSSSSSFLAKKNDQSEHQSVKREISSYSNNNIHCVRKPMVKPWKKPAIA 60
           M+A+ +Y+SSSS+   +    K  Q  H S            +H VRKP+ KPWKKP IA
Sbjct: 1   MEAYSSYSSSSSTLQEA-RGLKVAQPFHAS------------LHEVRKPLAKPWKKP-IA 60

Query: 61  PLPPTRPRVYKVDPINFRGLVQKLTGLAELRS-------------PRLQKMAPPPLDI-- 120
           PLPPT PRVYKVDPINFR LVQKLTG  E  S              RLQ++APPPL +  
Sbjct: 61  PLPPTPPRVYKVDPINFRDLVQKLTGAPEFMSQSQSSSQLQLPHHQRLQRVAPPPLSVAS 120

Query: 121 ---SRRQDSCSAAV---EDTVFKASSLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSP 167
              SR + S    +    D   K  +   ++N  +     L LNLSP + NWC+FP LSP
Sbjct: 121 SPLSRAEVSAQLHLLSGFDHSAKTQNQKFLDNAKITSNSSLGLNLSPSSYNWCAFPILSP 173

The following BLAST results are available for this feature:

BLAST of Csa6G495810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ29_ARATH	5.2e-07	41.25	VQ motif-containing protein 29 OS=Arabidopsis thaliana GN=VQ29 PE=2 SV=1	[more]

BLAST of Csa6G495810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJR2_CUCSA	2.6e-90	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495810 PE=4 SV=1	[more]
B9HFZ4_POPTR	1.7e-25	41.27	VQ motif-containing family protein OS=Populus trichocarpa GN=POPTR_0007s14810g P...	[more]
A0A067K775_JATCU	6.5e-25	43.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12557 PE=4 SV=1	[more]
A0A061DH87_THECC	8.5e-25	43.32	VQ motif-containing protein, putative OS=Theobroma cacao GN=TCM_000826 PE=4 SV=1	[more]
B9IBL6_POPTR	5.5e-24	42.33	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s00870g PE=4 SV=2	[more]

BLAST of Csa6G495810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22880.1	1.5e-09	33.60	VQ motif-containing protein	[more]
AT4G37710.1	2.9e-08	41.25	VQ motif-containing protein	[more]

BLAST of Csa6G495810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778718761\|ref\|XP_011657908.1\|	3.7e-90	100.00	PREDICTED: uncharacterized protein LOC105435910 [Cucumis sativus]	[more]
gi\|659079743\|ref\|XP_008440419.1\|	9.5e-86	95.29	PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo]	[more]
gi\|566181373\|ref\|XP_002310889.2\|	2.5e-25	41.27	VQ motif-containing family protein [Populus trichocarpa]	[more]
gi\|802646022\|ref\|XP_012079435.1\|	9.4e-25	43.09	PREDICTED: VQ motif-containing protein 9-like [Jatropha curcas]	[more]
gi\|590705941\|ref\|XP_007047583.1\|	1.2e-24	43.32	VQ motif-containing protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G495810.1	Csa6G495810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 67..87 score: 5.
None	No IPR available	PANTHER	PTHR34794	FAMILY NOT NAMED	coord: 6..166 score: 1.2
None	No IPR available	PANTHER	PTHR34794:SF1	SUBFAMILY NOT NAMED	coord: 6..166 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G495810	Cla014043	Watermelon (97103) v1	cuwmB500
Csa6G495810	MELO3C007650	Melon (DHL92) v3.5.1	cumeB503
Csa6G495810	ClCG01G017720	Watermelon (Charleston Gray)	cuwcgB432
Csa6G495810	Lsi01G008780	Bottle gourd (USVL1VR-Ls)	culsiB434
Csa6G495810	MELO3C007650.2	Melon (DHL92) v3.6.1	cumedB483
Csa6G495810	Cla97C01G016890	Watermelon (97103) v2	cuwmbB412
Csa6G495810	Bhi03G000807	Wax gourd	cuwgoB621
Csa6G495810	CSPI06G29060	Wild cucumber (PI 183967)	cpicuB313
Csa6G495810	Cucsa.103330	Cucumber (Gy14) v1	cgycuB121
Csa6G495810	CmaCh03G009010	Cucurbita maxima (Rimu)	cmacuB681
Csa6G495810	CmoCh03G009450	Cucurbita moschata (Rifu)	cmocuB670
Csa6G495810	Cp4.1LG19g10580	Cucurbita pepo (Zucchini)	cpecuB503
Csa6G495810	Cp4.1LG10g01930	Cucurbita pepo (Zucchini)	cpecuB085
Csa6G495810	CsGy6G028540	Cucumber (Gy14) v2	cgybcuB281
Csa6G495810	Carg18536	Silver-seed gourd	carcuB0003
Csa6G495810	Carg00778	Silver-seed gourd	carcuB0441

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G495810	Cucumber (Gy14) v1	cgycuB496
Csa6G495810	Cucumber (Gy14) v1	cgycuB552
Csa6G495810	Cucurbita maxima (Rimu)	cmacuB034
Csa6G495810	Cucurbita maxima (Rimu)	cmacuB194
Csa6G495810	Cucurbita maxima (Rimu)	cmacuB775
Csa6G495810	Cucurbita maxima (Rimu)	cmacuB877
Csa6G495810	Cucurbita moschata (Rifu)	cmocuB024
Csa6G495810	Cucurbita moschata (Rifu)	cmocuB176
Csa6G495810	Cucurbita moschata (Rifu)	cmocuB477
Csa6G495810	Cucurbita moschata (Rifu)	cmocuB766
Csa6G495810	Cucurbita moschata (Rifu)	cmocuB865
Csa6G495810	Melon (DHL92) v3.5.1	cumeB470
Csa6G495810	Melon (DHL92) v3.5.1	cumeB502
Csa6G495810	Watermelon (Charleston Gray)	cuwcgB503
Csa6G495810	Watermelon (97103) v1	cuwmB461
Csa6G495810	Cucurbita pepo (Zucchini)	cpecuB468
Csa6G495810	Bottle gourd (USVL1VR-Ls)	culsiB456
Csa6G495810	Bottle gourd (USVL1VR-Ls)	culsiB474
Csa6G495810	Cucumber (Gy14) v2	cgybcuB082
Csa6G495810	Cucumber (Gy14) v2	cgybcuB185
Csa6G495810	Melon (DHL92) v3.6.1	cumedB452
Csa6G495810	Melon (DHL92) v3.6.1	cumedB482
Csa6G495810	Silver-seed gourd	carcuB0348
Csa6G495810	Silver-seed gourd	carcuB0409
Csa6G495810	Silver-seed gourd	carcuB0791
Csa6G495810	Watermelon (97103) v2	cuwmbB494
Csa6G495810	Wax gourd	cuwgoB577
Csa6G495810	Cucumber (Chinese Long) v2	cucuB072
Csa6G495810	Cucumber (Chinese Long) v2	cucuB143