CsGy6G026840 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G026840
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontransmembrane protein 220
LocationChr6 : 26272852 .. 26278320 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGGTATTCCAAACCCTTCTCTTCTTTTCTTTCAATTAACAAACTTGTGAATCGAAGATCCGAACTTTTCAAAATCTCAGGCTGCTTTCTGTTGGTGATGATCTGACAACAGAAAATTTGATGAAGTTGAAATTGTGTGTTTGAATAATGTAATTTAGAAAACAAAAGCTTATTGGAGGGGTTAAACAATGCAGCAGCTACTTTTATACTGTTTAATAAAAGAATTTATGAAATGTATTTCGAACTCAAAAACATCACATGTGGATTAGTGGATTTTTCCTGTTACATGTGCAACCGTTTTCACAGTAAGAGACTATGATCCAACTACTCGCTACAGCTTTCAATTAGAGTAAGTATTTAGGCATCATGATACAATCATATCACAACTTAACAGAAGTGTATCAGAGGAGTATATACTTTTAGACTTCTACCGTTTATGTTAGTATATTTATGATAATACTATAATTGTTAAGGCATTTCCAAGACATGTTCCCTGATACCGCTATATAATTACAATCTATCTTTTATTTAATGGATACGGAGCACCAATGCTTTAGGAATACGTATATTTCAAACGTGTGTCTGACCCGTTATTCTAAATTACTGAAGAAATGTACATCTTGTAAAAGCCATTCAATTACTTTTCCTAATTCTGATATTGACTTGAGCAGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGTAAGGCTATAAGCTCATTCTTCTCTCTTTGGTTACAAATGGAAATTAGAGAGGCTAAAATTAAACCAACATCAAGGTACGGGAAACAAAAATCGAATTTGAAAAAACTATTTTAATCTTTGGTATAAGTTATGATTAATTAGGTATCGATATACTGTTTTATAAGCCTAAAGAATATTTTCAATTGATTGCAGGAATAGCATGTTTGGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGGTGAAAAAGGGCAAAATGAAATTCTGAAACATGTTGCACAAATCTCACTCTACAAACTTCAAAGGAATGGAAAGAGTTCTTGAGTTCAACATTGGTCGATTTAGTTCATGTATTTTTCCAATTTATAATGCAAACTCTCCATAAAATTGATCTGTTCTGATATAACAATTGAATGATCTGCCACAATTGTAAACTATGATACACTTTCAAAACAACCCATCACAACAACCAAATGAAAAAAGAAAAGAAAAGAAAAGGGGAACATATTTATTCCTAAAACTTCCTTGAAACTTTGGAAAAAAGCATATACAATTTGCTAAACTAAGTTGGTCCAGTAGTAAAAGTAAGATAAATCCATAGCTACAAACTAGAGAAGGTTAGAGGGCATTGACATCTTTTCAACCGGAAACAAATTCCTACGTACAGAAAATTTGTTTTGCCATTTTCCTCCGACCTCCAGGGTGAGGGAGTTGTTTGGCTAGACGAGGGAATAAACCTTAAAACAGTGCAGGATGTGTGCTCTCAGAACCTCTCCTGCTCGTTGTTCCAAAATTTAAGGCTCCAGGTCTTTTTCCCTCGAATGATAGGTTGAACATGTTCATCAAATATGACCTCAGCAACTTGAAGATTCACAGCCACTTCCTACGGGCAGTAGCTCACGTCGGTAATTGAATGTCAACTCTTCACCTGTAGCTATCTGCAGGAATACATGTACAGGAGTCTTAATATGAGATTGTGATTGCTTGTACAGAATGTTTCTTGGTTATATAAAAAGAAGTCGAAAATCAAACGAAGGTCCTAAACTTGGTTGGTACTATTAAACCAAGCACTTACATTCCGGTTAGCATACAATCCAATGTGTGAGCGTTGATATTCCATGCTTTCGACAAGGACTTGGTAAGTTACAAGATTTGGTGAGCAACTGCAAACGAGAAAGAAATTCAATTGTAAAAAAGTAAATCAGTAGATCTCTTGAAAAATACATGATACAGCATTAACTGTCTCTCGAAACTTCACATTGAAAAGTAACAAGATGTATAATTAATATTAGTGTTACCAATCAGTTAAATGCAATTTAGATAAATCAAGAATCTTATTATTAAAAAGTTAACGGGTAAAGAACACCACATGCCTATTCCATACATAATGTAGCTTGCATAAAATAATATGTGGTGAAAGTGGTTTTAACGGAACTGATTAGCAACTTTCTGGAAATTCAAAAGAAACGATCCCCAAGCAGATAATAAATAAGCCAGCAAGTTGATTGGTCTTAAAATGATCATAAAAGTTTCAGAAATAAACACAGTAAAATTACCAAATTTCTGAACGAGTGGAAAGTATACGTGGAACACAAATCTCTGCTCACCTGTGATTTATAAATCTCGAAACATTTCCATAATGTGTGGCATCAATAATATATCTGGCTGATCCGTCAACCAATCTGCTAATGTCATTAATATGAGCATCCACATCCAAGAAATAGCAGTTGCCTTCGCTGTTATACCTAATAAAAGATATATTGGATCATATATAGAAGAAAATATAAAAAAAATGATTTTAAAGAGAACTTCAAAAAAAATGATACAGACTTGTCACGTCTCCTGTTTGCTTCCTGCTCATCCAACACCTCCCCAACATACTCGCAAACAAATGTACCACGCATGATTGCTTCACCAGCCCTCACCGCCCATCCCTGTTTTGTTTTTACAACTTCATATAAGAAACTACTGAAAACAACAGCTGGGAAACTAGAGGCAATATACAAGTTAGCAGGAAAAGAAATATCATTGAGATACAAAAGCGAGAAATTGCCTTTGTCTCTGTCATGAAGACTTCAAGTTTCACGTGAACTCCATTTTGCAACACTCTATTTGGACAGGCCCTACTACAGCTACACCTTTCATTACACTCATAGACAAGGTAACCTTCCTGCAGAAACAAAAAACCCAATCTGAGACAAATGATACATTAAACGGTAGGAACAAAATGAAACATGGTTTTAAAATTTGAGGATTTTAAGAACCAAGGACAACATGTTGCAATGGTTCAGAGAAGATGATTCAACAGCAGATGAATTAACAAAATCAAAACAGACGGCAAGTTTATTTAGGGTACTTAGACCCATTCATATTCCATATAAGGATGGAAAAAACAAATCTGTAATCTTCAAAGTAACAAATAAGCATGAGTAAATTGAAGGGAAATTATTCCAAGTGACAAAACTGTAGAAAATATTTACAAATATGGCAAAATTTAAAATATTTACAAATATGGCAAAATTTTATAATCTATCAATGATAGGATTCTCCCATTGATAGATTATGAAATTTTGTTATATTTGTAAATATTTTGGCTCATTTTGCTATATTTAAAAGAAGCCCTAAAATTAAGTTAACTTCATATGAAATATGAATGTGTCCATGTACCTTAAAGAAAAAGTTAAACTCAACAAACTAGCAATTAAATAAAAATAAAGTAAGAGAAAGGAGGTAAGAATAAACAATATAAAGAGTGTTGGCAGTAGATCAAAAACATTGTTGCATCAAGAAACGTGACTGTGTTGGCTGGAAAGTAATGTAAAACATACCTCCAGAATAATTTGACCATTCTCGTCATATGGGAACCTGCGACGCATGGGATTCCCATAAATGTCCTTTGGGTCTTCGTAATCACTATTAAAGAGGTATACATGATCACATGTTTCGGAAGAACAGAGTAAATGGGGGCAGGCACATCCGAACTGCAGACTCTGGACATGATGCAAACATAAAAATAACTTTACATTGTGTACGTTGAAAATTTATAATCATAGTTAGGTTTAGTCAAAAACAATTCTGGGAAGTAATATAAAGGCATTTAAAACCCTGCCAAAGCCAGAACAATACAGATAATCCTAGATGGTATGAATGGATAATGTTGGCCTCTCAACTAAGGATGCATATGCAGATTGTGCAAGAAAATTTACACGAGCCCATTTGGTAGTTAAATCATAATGTGATAAACATTAGAAAGAGGTATAGAAACATTAATGAACAAAAACACAATAGGGAGAACTCGCATATAATCAACACAATCTTTCATGTTGAAGAAAGAAAAAAGTTCTTTGACATCAAGAATTTATATCAGTTTAGCGTTAGCCTTGAGATAAAAAGTAATTCATAGATAACTACCTCTGTGTCAATGGCGAGGGATTTATCAAGCAACGGTTTCTTAATGTAGATAAAATCCTCCCAAGGCACCGAGTGTCCAACATTTTGACCATCATCAGCTACACAGACCACAGGAACTAATTCCTGGCCAAAGCTTATATCTTCACACAAAACAACAGTCTTTTCCCTAAACTGCTGGCTTGAAAGATGATCTTTCCATTTGCTATTCACAGGATCAGGAGTGCATGCATTCTTGTTGTCTCCAAAACCATTTGGATGAGGCATCAAAAGAGGATATGTCTCACATCCTTTAGGACAAACAAATCCCTTCATATTCCAGTTAACTTCGCCTTTTTCCCTGCATAATTCAACTGCCTTAAGGTAAAAATACTCTGGTAATACTCCAAACTTCTGTTCCAGAAGGACTTTAAATTTGACCTTGCAACAGGCAGAGTGAGCAATAGACAAAATGTCAATATTGGTAGGAGATAGTTTTCTTTTCTGAATCTCAGAAACAAATGCCTTGGCAACAATTGAACCTTGGGTTAATTTACGAGAACTTGCTAACTGGGACACATGAGGTTGAAGATCTACACTTCCTGTGCTTAGTAATTTTGAAGCTTGGATATGTTTTTTCATGCTAGCTTTTGTTCTGTTTCTGATCCTATTTGACACACCTGCCTTAGTCTTCTTAAATCTAGGATGACCAAGTTTCCCAGACTTTGATTTATAAGCATAATAATTAAATCCCCTCTTTGCAGGTCGAGAGTTAACTAAACCTGGCCCCATATGCGCAGCTTGATGGTGACGACCGAGATCAGGCAGTAAATCAAACTTCAAACCACAGAACCTACAGTTAAACTTTCGTAAACCTCCTACATTCTTGTTGTCATTTTCCTTAGAAACTATATTACGCTGCTTGGGTTTGACTGGGGAATCCTCACCGGAAGAAGAATTCTGCCGCCTACTAGAATTTGA

mRNA sequence

ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGATGTGTGCTCTCAGAACCTCTCCTGCTCGTTGTTCCAAAATTTAAGGCTCCAGGTCTTTTTCCCTCGAATGATAGGTTGAACATGTTCATCAAATATGACCTCAGCAACTTGAAGATTCACAGCCACTTCCTACGGGCAGTAGCTCACGTCGAGAACTTCAAAAAAAATGATACAGACTTGTCACGTCTCCTGTTTGCTTCCTGCTCATCCAACACCTCCCCAACATACTCGCAAACAAATGTACCACGCATGATTGCTTCACCAGCCCTCACCGCCCATCCCTGTTTTGTTTTTACAACTTCATATAAGAAACTACTGAAAACAACAGCTGGGAAACTAGAGGCAATATACAAAACCAAGGACAACATGTTGCAATGGTTCAGAGAAGATGATTCAACAGCAGATGAATTAACAAAATCAAAACAGACGGCAAGTTTATTTAGGAATAATTTGACCATTCTCGTCATATGGGAACCTGCGACGCATGGGATTCCCATAAATGTCCTTTGGGTCTTCGTAATCACTATTAAAGAGAAACAAATGCCTTGGCAACAATTGAACCTTGGGTTAATTTACGAGAACTTGCTAACTGGGACACATGAGGTTGAAGATCTACACTTCCTAAACTATATTACGCTGCTTGGGTTTGACTGGGGAATCCTCACCGGAAGAAGAATTCTGCCGCCTACTAGAATTTGA

Coding sequence (CDS)

ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGATGTGTGCTCTCAGAACCTCTCCTGCTCGTTGTTCCAAAATTTAAGGCTCCAGGTCTTTTTCCCTCGAATGATAGGTTGAACATGTTCATCAAATATGACCTCAGCAACTTGAAGATTCACAGCCACTTCCTACGGGCAGTAGCTCACGTCGAGAACTTCAAAAAAAATGATACAGACTTGTCACGTCTCCTGTTTGCTTCCTGCTCATCCAACACCTCCCCAACATACTCGCAAACAAATGTACCACGCATGATTGCTTCACCAGCCCTCACCGCCCATCCCTGTTTTGTTTTTACAACTTCATATAAGAAACTACTGAAAACAACAGCTGGGAAACTAGAGGCAATATACAAAACCAAGGACAACATGTTGCAATGGTTCAGAGAAGATGATTCAACAGCAGATGAATTAACAAAATCAAAACAGACGGCAAGTTTATTTAGGAATAATTTGACCATTCTCGTCATATGGGAACCTGCGACGCATGGGATTCCCATAAATGTCCTTTGGGTCTTCGTAATCACTATTAAAGAGAAACAAATGCCTTGGCAACAATTGAACCTTGGGTTAATTTACGAGAACTTGCTAACTGGGACACATGAGGTTGAAGATCTACACTTCCTAAACTATATTACGCTGCTTGGGTTTGACTGGGGAATCCTCACCGGAAGAAGAATTCTGCCGCCTACTAGAATTTGA

Protein sequence

MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGCVLSEPLLLVVPKFKAPGLFPSNDRLNMFIKYDLSNLKIHSHFLRAVAHVENFKKNDTDLSRLLFASCSSNTSPTYSQTNVPRMIASPALTAHPCFVFTTSYKKLLKTTAGKLEAIYKTKDNMLQWFREDDSTADELTKSKQTASLFRNNLTILVIWEPATHGIPINVLWVFVITIKEKQMPWQQLNLGLIYENLLTGTHEVEDLHFLNYITLLGFDWGILTGRRILPPTRI
Homology
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BLAST of CsGy6G026840 vs. NCBI nr
Match: XP_004141949.1 (PREDICTED: transmembrane protein 220 [Cucumis sativus] >KGN48459.1 hypothetical protein Csa_6G487800 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           SPKLRRTSKSKSKRVFPRHLTYG
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYG 143

[Close]
BLAST of CsGy6G026840 vs. NCBI nr
Match: XP_008440175.1 (PREDICTED: transmembrane protein 220 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 139/143 (97.20%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MAIPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           SPKLR T  SKSKRVFPRHLTYG
Sbjct: 121 SPKLRIT--SKSKRVFPRHLTYG 141

[Close]
BLAST of CsGy6G026840 vs. NCBI nr
Match: XP_022962868.1 (uncharacterized protein LOC111463236 [Cucurbita moschata])

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYI 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           S + R     K +RVF R+++YG
Sbjct: 121 SIRTR-----KGERVFSRYVSYG 138

[Close]
BLAST of CsGy6G026840 vs. NCBI nr
Match: XP_023517546.1 (uncharacterized protein LOC111781274 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNL+ W+VSL+ +  V
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLVNWDVSLQGVAYV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           S + R     K +RVF R+++YG
Sbjct: 121 SIRTR-----KGERVFSRYVSYG 138

[Close]
BLAST of CsGy6G026840 vs. NCBI nr
Match: XP_023003396.1 (uncharacterized protein LOC111497019 [Cucurbita maxima])

HSP 1 Score: 221.1 bits (562), Expect = 6.4e-54
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSLE +  V
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLEGVAYV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED+++GIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVHGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           S + R     K +RVF R++++G
Sbjct: 121 SIRTR-----KGERVFSRYVSHG 138

[Close]
BLAST of CsGy6G026840 vs. TAIR10
Match: AT2G23755.1 (unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 9.3e-31
Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA P  L+  CS+LM FLFAYS +VQ NDPDWY W PLY  AC VNL+ +   ++ M  +
Sbjct: 1   MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLACVVNLINYRRRIKLM--M 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
            + A+ +G+ L VKV+AED +    G LSLDL+ RVVREK GSGLV+ SM+L L A+SSS
Sbjct: 61  MRTALSLGVFLLVKVIAEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQASSSS 119

Query: 121 S 122
           S
Sbjct: 121 S 119

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BLAST of CsGy6G026840 vs. Swiss-Prot
Match: sp|Q8BP07|TM220_MOUSE (Transmembrane protein 220 OS=Mus musculus OX=10090 GN=Tmem220 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.1e-04
Identity = 36/122 (29.51%), Postives = 56/122 (45.90%), Query Frame = 0 

Query: 7   LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMG 66
           L+ +C+ LM   FA +  VQ NDPD  LWV +Y     + LL     L   N + K+   
Sbjct: 12  LWRACNALMAAFFALAAVVQVNDPDAELWVVVYMIPAVLTLLVGFNPLVTGNFIWKSVSA 71

Query: 67  VGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---SGLVVCSMILHLIAASSS 123
           + +    LW          G+A    L   + ++ E+ G   SGLV+ +  + L  +SS 
Sbjct: 72  IHMLFCALWA--------GGLAYHFLLHAKQNLLNEEEGRELSGLVIVTAWMALCHSSSK 125

[Close]
BLAST of CsGy6G026840 vs. TrEMBL
Match: tr|A0A0A0KI28|A0A0A0KI28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487800 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.7e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           SPKLRRTSKSKSKRVFPRHLTYG
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYG 143

[Close]
BLAST of CsGy6G026840 vs. TrEMBL
Match: tr|A0A1S3B186|A0A1S3B186_CUCME (transmembrane protein 220 OS=Cucumis melo OX=3656 GN=LOC103484718 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70
Identity = 139/143 (97.20%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MAIPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           SPKLR T  SKSKRVFPRHLTYG
Sbjct: 121 SPKLRIT--SKSKRVFPRHLTYG 141

[Close]
BLAST of CsGy6G026840 vs. TrEMBL
Match: tr|A0A2P6RMT0|A0A2P6RMT0_ROSCH (Putative TMEM220 protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0103011 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 81/143 (56.64%), Postives = 105/143 (73.43%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLY+ CS+LM  LFAYS AVQ NDPDWY W  LY  AC VNL+ W ++ + +N  
Sbjct: 1   MATPSKLYTLCSLLMAALFAYSAAVQLNDPDWYFWFLLYAVACVVNLVNWAITSKKINQF 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           A+AA+ +G+ L++KV+AED++NGI+GF SLDLSERV+REK GSGLV+ SM+L L+ AS S
Sbjct: 61  AEAALWLGMFLFIKVLAEDFVNGISGFWSLDLSERVIREKIGSGLVIISMVLQLM-ASLS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYG 144
           SP+     +       PR+L YG
Sbjct: 121 SPEAPTQKR-------PRYLEYG 135

[Close]
BLAST of CsGy6G026840 vs. TrEMBL
Match: tr|A0A2I4FEX1|A0A2I4FEX1_9ROSI (uncharacterized protein LOC108998176 OS=Juglans regia OX=51240 GN=LOC108998176 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.8e-35
Identity = 85/165 (51.52%), Postives = 110/165 (66.67%), Query Frame = 0 

Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLE--AMN 60
           MA PSKLYS CSVLM  LFAYS +VQ ND DWY W PLY C C +N++ W +SL    + 
Sbjct: 1   MANPSKLYSLCSVLMASLFAYSASVQLNDHDWYFWFPLYACGCVMNMVNWAISLRTTTIR 60

Query: 61  NVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAAS 120
           ++A+ ++ +GI L++KVV ED++NGIAGF SLDLS+RVVREKTGSGLVV S+IL L A+ 
Sbjct: 61  HIARLSLLLGIFLFIKVVTEDFVNGIAGFWSLDLSQRVVREKTGSGLVVISLILQLEASL 120

Query: 121 SSSPKLRRTSKSKSKRVFPRHLTYGCVLSEPLLLVVPKFKAPGLF 164
                L R      K+ FP+ + YG       +LVV  +  P +F
Sbjct: 121 VPEDPLPR-----KKKEFPKLVEYGMA-----ILVVFGYGLPFVF 155

[Close]
BLAST of CsGy6G026840 vs. TrEMBL
Match: tr|A0A2K1ZNK9|A0A2K1ZNK9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G032900v3 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.8e-35
Identity = 79/136 (58.09%), Postives = 96/136 (70.59%), Query Frame = 0 

Query: 8   YSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGV 67
           +S CS+LM  LF YS +VQ NDPDWY W+PLY CACAVNL+ W +S   +  +AK  +  
Sbjct: 26  FSLCSLLMAALFGYSASVQLNDPDWYFWLPLYACACAVNLVNWAISNTTIRQIAKVTLWF 85

Query: 68  GICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSSSPKLRRT 127
              L+VKVV EDY+NG AGF SLD+SERVVREKTGSGLV+ SMILHL A  SS PK   +
Sbjct: 86  AALLFVKVVIEDYVNGTAGFWSLDVSERVVREKTGSGLVLISMILHLEA--SSEPK--HS 145

Query: 128 SKSKSKRVFPRHLTYG 144
              + +R FPR + YG
Sbjct: 146 KMPRKRREFPRSVEYG 157

The following BLAST results are available for this feature:
BLAST of CsGy6G026840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141949.11.5e-74100.00PREDICTED: transmembrane protein 220 [Cucumis sativus] >KGN48459.1 hypothetical ... [more]
XP_008440175.11.7e-7097.20PREDICTED: transmembrane protein 220 [Cucumis melo][more]
XP_022962868.11.3e-5476.22uncharacterized protein LOC111463236 [Cucurbita moschata][more]
XP_023517546.12.2e-5476.22uncharacterized protein LOC111781274 [Cucurbita pepo subsp. pepo][more]
XP_023003396.16.4e-5476.22uncharacterized protein LOC111497019 [Cucurbita maxima][more]
BLAST of CsGy6G026840 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23755.19.3e-3155.37unknown protein[more]
BLAST of CsGy6G026840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8BP07|TM220_MOUSE7.1e-0429.51Transmembrane protein 220 OS=Mus musculus OX=10090 GN=Tmem220 PE=2 SV=1[more]
BLAST of CsGy6G026840 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KI28|A0A0A0KI28_CUCSA9.7e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487800 PE=4 SV=1[more]
tr|A0A1S3B186|A0A1S3B186_CUCME1.1e-7097.20transmembrane protein 220 OS=Cucumis melo OX=3656 GN=LOC103484718 PE=4 SV=1[more]
tr|A0A2P6RMT0|A0A2P6RMT0_ROSCH1.5e-3556.64Putative TMEM220 protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0103011 PE=... [more]
tr|A0A2I4FEX1|A0A2I4FEX1_9ROSI9.8e-3551.52uncharacterized protein LOC108998176 OS=Juglans regia OX=51240 GN=LOC108998176 P... [more]
tr|A0A2K1ZNK9|A0A2K1ZNK9_POPTR9.8e-3558.09Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G032900v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029377TMEM220
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G026840.1CsGy6G026840.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029377TMEM220 proteinPFAMPF15071TMEM220coord: 18..113
e-value: 1.3E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR34262FAMILY NOT NAMEDcoord: 3..122

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G026840Csa6G487800Cucumber (Chinese Long) v2cgybcuB281
CsGy6G026840MELO3C007502Melon (DHL92) v3.5.1cgybmeB444
CsGy6G026840ClCG01G016310Watermelon (Charleston Gray)cgybwcgB399
CsGy6G026840CSPI06G27480Wild cucumber (PI 183967)cgybcpiB287
CsGy6G026840CmaCh07G007430Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G026840CmoCh07G007640Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G026840Cp4.1LG19g11590Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G026840MELO3C007502.2Melon (DHL92) v3.6.1cgybmedB440
CsGy6G026840CsaV3_6G042630Cucumber (Chinese Long) v3cgybcucB298
CsGy6G026840Cla97C01G015310Watermelon (97103) v2cgybwmbB394
CsGy6G026840Bhi03G001510Wax gourdcgybwgoB600
CsGy6G026840Carg05251Silver-seed gourdcarcgybB0799
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G026840Wild cucumber (PI 183967)cgybcpiB261
CsGy6G026840Silver-seed gourdcarcgybB0198
CsGy6G026840Silver-seed gourdcarcgybB0418
CsGy6G026840Cucumber (Chinese Long) v3cgybcucB265
CsGy6G026840Watermelon (97103) v2cgybwmbB471
CsGy6G026840Wax gourdcgybwgoB557
CsGy6G026840Cucumber (Gy14) v2cgybcgybB067
CsGy6G026840Cucurbita maxima (Rimu)cgybcmaB794
CsGy6G026840Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G026840Cucurbita maxima (Rimu)cgybcmaB848
CsGy6G026840Cucurbita moschata (Rifu)cgybcmoB775
CsGy6G026840Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G026840Cucurbita moschata (Rifu)cgybcmoB832
CsGy6G026840Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G026840Cucurbita pepo (Zucchini)cgybcpeB719
CsGy6G026840Cucurbita pepo (Zucchini)cgybcpeB774
CsGy6G026840Cucumber (Chinese Long) v2cgybcuB253
CsGy6G026840Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G026840Melon (DHL92) v3.5.1cgybmeB414
CsGy6G026840Melon (DHL92) v3.6.1cgybmedB412
CsGy6G026840Watermelon (Charleston Gray)cgybwcgB464
CsGy6G026840Watermelon (97103) v1cgybwmB435
CsGy6G026840Watermelon (97103) v1cgybwmB468