CsGy6G022590 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G022590
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprobable CCR4-associated factor 1 homolog 11
LocationChr6 : 23014995 .. 23015820 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCACCGCTACCCTTTCATCTCCATCGACACTGAGTTCCCAGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCGCCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACACTCGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTCAGGGATTTCGACGTTGCACGCGACCCCCACGCCCCGGATTCCATCGAGCTCTTGAAACAACAGGGGATTGATTTCCACCGGAACAGAACTCATGGGGTTTGCTCCTCCCGGTTCGCCGACTTGGTGATGTCATCCGGTCTTTTGTGCAATGACTCCCTCACTTGGGTTACCTTTCACAGCGCCTATGACTTTGGTTACCTTTCACAGCGCCTATGACTTTGGTTACTTGGTTAAGATTCTCACCCGGACCAAACTGCCGTCTCGGCTTCAGGATTTCTTGAACATTCTCAAGGGGTTGTTTGGGAAAAAGGTTTATGACGTGAAGCATATGATGCGGTTCTGTGATGGGCTTTATGGGGGTTTGGACCGCCTTGCTAAAACGCTTGATTTGGACCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCTGATTCCCTCCTCACATTCCAAGCTTTTAAGAAGATGAGTGATGTTTACTTCTCAAAGGATGGCCCGGACAAGCACGCCGGCGTCTTGTTTGGTTTAGAATTGTATTGA

mRNA sequence

ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCACCGCTACCCTTTCATCTCCATCGACACTGAGTTCCCAGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCGCCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACACTCGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTCAGGGATTTCGACGTTGCACGCGACCCCCACGCCCCGGATTCCATCGAGCTCTTGAAACAACAGGGGATTGATTTCCACCGGAACAGAACTCATGGGGTTTGCTCCTCCCGCGCCTATGACTTTGGTTACTTGGTTAAGATTCTCACCCGGACCAAACTGCCGTCTCGGCTTCAGGATTTCTTGAACATTCTCAAGGGGTTGTTTGGGAAAAAGGTTTATGACGTGAAGCATATGATGCGGTTCTGTGATGGGCTTTATGGGGGTTTGGACCGCCTTGCTAAAACGCTTGATTTGGACCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCTGATTCCCTCCTCACATTCCAAGCTTTTAAGAAGATGAGTGATGTTTACTTCTCAAAGGATGGCCCGGACAAGCACGCCGGCGTCTTGTTTGGTTTAGAATTGTATTGA

Coding sequence (CDS)

ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCACCGCTACCCTTTCATCTCCATCGACACTGAGTTCCCAGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCGCCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACACTCGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTCAGGGATTTCGACGTTGCACGCGACCCCCACGCCCCGGATTCCATCGAGCTCTTGAAACAACAGGGGATTGATTTCCACCGGAACAGAACTCATGGGGTTTGCTCCTCCCGCGCCTATGACTTTGGTTACTTGGTTAAGATTCTCACCCGGACCAAACTGCCGTCTCGGCTTCAGGATTTCTTGAACATTCTCAAGGGGTTGTTTGGGAAAAAGGTTTATGACGTGAAGCATATGATGCGGTTCTGTGATGGGCTTTATGGGGGTTTGGACCGCCTTGCTAAAACGCTTGATTTGGACCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCTGATTCCCTCCTCACATTCCAAGCTTTTAAGAAGATGAGTGATGTTTACTTCTCAAAGGATGGCCCGGACAAGCACGCCGGCGTCTTGTTTGGTTTAGAATTGTATTGA

Protein sequence

MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDFHRNRTHGVCSSRAYDFGYLVKILTRTKLPSRLQDFLNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKMSDVYFSKDGPDKHAGVLFGLELY
Homology
[Close]
BLAST of CsGy6G022590 vs. NCBI nr
Match: XP_004140166.1 (PREDICTED: probable CCR4-associated factor 1 homolog 9 [Cucumis sativus] >KGN48042.1 hypothetical protein Csa_6G425790 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 3.6e-135
Identity = 242/265 (91.32%), Postives = 242/265 (91.32%), Query Frame = 0 

Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120
           SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDF 180
           DFHRNRTHGVCSSR                       AYDFGYLVKILTRTKLPSRLQDF
Sbjct: 121 DFHRNRTHGVCSSRFADLVMSSGLLCNDSLTWVTFHSAYDFGYLVKILTRTKLPSRLQDF 180

Query: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240
           LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK
Sbjct: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240

Query: 241 KMSDVYFSKDGPDKHAGVLFGLELY 243
           KMSDVYFSKDGPDKHAGVLFGLELY
Sbjct: 241 KMSDVYFSKDGPDKHAGVLFGLELY 265

[Close]
BLAST of CsGy6G022590 vs. NCBI nr
Match: XP_008449941.1 (PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo])

HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-122
Identity = 221/260 (85.00%), Postives = 227/260 (87.31%), Query Frame = 0 

Query: 6   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDA 65
           RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDA
Sbjct: 1   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 60

Query: 66  LNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDFHRN 125
           LNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDFDVAR PH P SIELLKQQGIDFHRN
Sbjct: 61  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 120

Query: 126 RTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLNILK 185
           RTHGVCSS+                       AYDFGYLVKILTRTKLPSRL DFLNIL 
Sbjct: 121 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 180

Query: 186 GLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKMSDV 243
            LFG KVYDVKHMMRFCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFKKM DV
Sbjct: 181 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 240

[Close]
BLAST of CsGy6G022590 vs. NCBI nr
Match: XP_022957732.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata])

HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102
Identity = 188/263 (71.48%), Postives = 207/263 (78.71%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSN
Sbjct: 10  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           VDALNLIQ+GLTLSDA GNLPTLGT   FIWEFNFRDFDV RD HAPDSI+LLK+QGIDF
Sbjct: 70  VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 129

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            RNR HGV S+R                       AYDFGYLVKILTR KLPSRL +FL 
Sbjct: 130 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 189

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 242
           ILK  FG KVYDVKHMMRFCD LYGGL+R+AKTL +DRAVGK HQAGSDSLLT+ AF+KM
Sbjct: 190 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 249

[Close]
BLAST of CsGy6G022590 vs. NCBI nr
Match: XP_023534188.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo] >XP_023534282.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102
Identity = 188/263 (71.48%), Postives = 207/263 (78.71%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSN
Sbjct: 58  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 117

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           VDALNLIQ+GLTLSDA GNLPTLGT   FIWEFNFRDFDV RD HAPDSI+LLK+QGIDF
Sbjct: 118 VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 177

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            RNR HGV S+R                       AYDFGYLVKILTR KLPSRL +FL 
Sbjct: 178 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 237

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 242
           ILK  FG KVYDVKHMMRFCD LYGGL+R+AKTL +DRAVGK HQAGSDSLLT+ AF+KM
Sbjct: 238 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 297

[Close]
BLAST of CsGy6G022590 vs. NCBI nr
Match: XP_022995114.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima])

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           I  R+VWD NL HEF LI  L+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSN
Sbjct: 60  IHVREVWDFNLHHEFRLINHLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 119

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           VDALNLIQ+GLTLSDA GNLPTLGT   FIWEFNFRDFDV RD HAPDSI+LLK+QGIDF
Sbjct: 120 VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 179

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            RNR HGV S+R                       AYDFGYLVKILTR KLPSRL +FL 
Sbjct: 180 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 239

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 242
           ILK  FG KVYDVKHMMRFCD LYGGL+R+AKTL +DRAVGK HQAGSDSLLT+ AF+KM
Sbjct: 240 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 299

[Close]
BLAST of CsGy6G022590 vs. TAIR10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-83
Identity = 155/266 (58.27%), Postives = 195/266 (73.31%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L      P D Y LLK+N
Sbjct: 17  VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRF--TNPDDLYTLLKAN 76

Query: 63  VDALNLIQLGLTLSDAHGNLPTLG--TKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 122
           VDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDFDVARD HAPDSIELL++QGI
Sbjct: 77  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGI 136

Query: 123 DFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDF 182
           DF RN   GV S R                       AYDFGYL+KILTR +LP  L +F
Sbjct: 137 DFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEF 196

Query: 183 LNILKGLFGKKVYDVKHMMRFCD-GLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAF 242
             +++ LFG++VYDVKHMM+FC+  L+GGLDR+A+TL+++RAVGK HQAGSDSLLT+ AF
Sbjct: 197 KRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAF 256

[Close]
BLAST of CsGy6G022590 vs. TAIR10
Match: AT5G22250.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 301.6 bits (771), Expect = 4.4e-82
Identity = 157/268 (58.58%), Postives = 195/268 (72.76%), Query Frame = 0 

Query: 2   LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLK 61
           +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L       P+  Y LLK
Sbjct: 11  VIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLK 70

Query: 62  SNVDALNLIQLGLTLSDAHGNLPTLGTKNS--FIWEFNFRDFDVARDPHAPDSIELLKQQ 121
           SNVDAL+LIQ+GLTLSDA GNLP LG + +  +IWEFNFRDFDV RDPHAPDSIELL++ 
Sbjct: 71  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 130

Query: 122 GIDFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQ 181
           GIDF RNR  GV S R                       AYDFGYLVKILTR +LP  L+
Sbjct: 131 GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALR 190

Query: 182 DFLNILKGLFGKKVYDVKHMMRFCD-GLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQ 241
           +FL +L+  FG +VYDVKH+MRFC+  LYGGLDR+A++L+++RAVGK HQAGSDSLLT+Q
Sbjct: 191 EFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQ 250

Query: 242 AFKKMSDVYFSKDGPDKHAGVLFGLELY 243
           AF++M D+YF +DG +KHAGVL+GLE++
Sbjct: 251 AFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]
BLAST of CsGy6G022590 vs. TAIR10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58
Identity = 119/260 (45.77%), Postives = 165/260 (63.46%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +         +Y  LK N
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP-VATFKYNNDLNYRTLKEN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           VD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++  D +A +SIELL+Q GIDF
Sbjct: 70  VDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDF 129

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            +N   G+   R                        YDFGYLVK+LT  +LP +  DF  
Sbjct: 130 KKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFK 189

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 240
           +L   F   VYD+KH+M FC+GL+GGL+RLA+ + ++R VG  HQAGSDSLLT  +F+K+
Sbjct: 190 LLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKL 249

[Close]
BLAST of CsGy6G022590 vs. TAIR10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 221.5 bits (563), Expect = 5.7e-58
Identity = 119/261 (45.59%), Postives = 165/261 (63.22%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +         HY  LK+N
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSF-IWEFNFRDFDVARDPHAPDSIELLKQQGID 122
           V+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD+  D +A DSIELL+Q GID
Sbjct: 70  VNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID 129

Query: 123 FHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFL 182
           F +N   G+ S R                        YDFGYL+K+LT   LP     F 
Sbjct: 130 FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFF 189

Query: 183 NILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKK 240
            ++   F  +VYD+KH+M+FC+ L+GGL++LA+ LD++R VG  HQAGSDSLLT   F+K
Sbjct: 190 EMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRK 249

[Close]
BLAST of CsGy6G022590 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 8.3e-57
Identity = 118/261 (45.21%), Postives = 163/261 (62.45%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +         HY  LK+N
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRP-VGTFKSNADYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           V+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+  D  A DSIELLKQ GID 
Sbjct: 70  VNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDL 129

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            +N   G+ S R                        YDFGYL+K+LT   LP    DF  
Sbjct: 130 AKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFK 189

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 240
           ++   F   VYD+KH+M+FC+ L+GGL++LA+ L+++R VG  HQAGSDSLLT   F+K+
Sbjct: 190 LINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKL 249

[Close]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match: sp|Q9LXM2|CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.4e-82
Identity = 155/266 (58.27%), Postives = 195/266 (73.31%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L      P D Y LLK+N
Sbjct: 17  VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRF--TNPDDLYTLLKAN 76

Query: 63  VDALNLIQLGLTLSDAHGNLPTLG--TKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 122
           VDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDFDVARD HAPDSIELL++QGI
Sbjct: 77  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGI 136

Query: 123 DFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDF 182
           DF RN   GV S R                       AYDFGYL+KILTR +LP  L +F
Sbjct: 137 DFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEF 196

Query: 183 LNILKGLFGKKVYDVKHMMRFCD-GLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAF 242
             +++ LFG++VYDVKHMM+FC+  L+GGLDR+A+TL+++RAVGK HQAGSDSLLT+ AF
Sbjct: 197 KRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAF 256

[Close]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match: sp|Q9FMS6|CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.9e-81
Identity = 157/268 (58.58%), Postives = 195/268 (72.76%), Query Frame = 0 

Query: 2   LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLK 61
           +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L       P+  Y LLK
Sbjct: 11  VIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLK 70

Query: 62  SNVDALNLIQLGLTLSDAHGNLPTLGTKNS--FIWEFNFRDFDVARDPHAPDSIELLKQQ 121
           SNVDAL+LIQ+GLTLSDA GNLP LG + +  +IWEFNFRDFDV RDPHAPDSIELL++ 
Sbjct: 71  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 130

Query: 122 GIDFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQ 181
           GIDF RNR  GV S R                       AYDFGYLVKILTR +LP  L+
Sbjct: 131 GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALR 190

Query: 182 DFLNILKGLFGKKVYDVKHMMRFCD-GLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQ 241
           +FL +L+  FG +VYDVKH+MRFC+  LYGGLDR+A++L+++RAVGK HQAGSDSLLT+Q
Sbjct: 191 EFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQ 250

Query: 242 AFKKMSDVYFSKDGPDKHAGVLFGLELY 243
           AF++M D+YF +DG +KHAGVL+GLE++
Sbjct: 251 AFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match: sp|Q9LEU4|CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57
Identity = 119/260 (45.77%), Postives = 165/260 (63.46%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +         +Y  LK N
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP-VATFKYNNDLNYRTLKEN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           VD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++  D +A +SIELL+Q GIDF
Sbjct: 70  VDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDF 129

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            +N   G+   R                        YDFGYLVK+LT  +LP +  DF  
Sbjct: 130 KKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFK 189

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 240
           +L   F   VYD+KH+M FC+GL+GGL+RLA+ + ++R VG  HQAGSDSLLT  +F+K+
Sbjct: 190 LLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKL 249

[Close]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match: sp|Q9SKZ2|CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-56
Identity = 119/261 (45.59%), Postives = 165/261 (63.22%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +         HY  LK+N
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSF-IWEFNFRDFDVARDPHAPDSIELLKQQGID 122
           V+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD+  D +A DSIELL+Q GID
Sbjct: 70  VNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID 129

Query: 123 FHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFL 182
           F +N   G+ S R                        YDFGYL+K+LT   LP     F 
Sbjct: 130 FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFF 189

Query: 183 NILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKK 240
            ++   F  +VYD+KH+M+FC+ L+GGL++LA+ LD++R VG  HQAGSDSLLT   F+K
Sbjct: 190 EMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRK 249

[Close]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match: sp|Q9SAI2|CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 118/261 (45.21%), Postives = 163/261 (62.45%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSN 62
           IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +         HY  LK+N
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRP-VGTFKSNADYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDF 122
           V+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+  D  A DSIELLKQ GID 
Sbjct: 70  VNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDL 129

Query: 123 HRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLN 182
            +N   G+ S R                        YDFGYL+K+LT   LP    DF  
Sbjct: 130 AKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFK 189

Query: 183 ILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKM 240
           ++   F   VYD+KH+M+FC+ L+GGL++LA+ L+++R VG  HQAGSDSLLT   F+K+
Sbjct: 190 LINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKL 249

[Close]
BLAST of CsGy6G022590 vs. TrEMBL
Match: tr|A0A0A0KI60|A0A0A0KI60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425790 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 2.4e-135
Identity = 242/265 (91.32%), Postives = 242/265 (91.32%), Query Frame = 0 

Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120
           SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDF 180
           DFHRNRTHGVCSSR                       AYDFGYLVKILTRTKLPSRLQDF
Sbjct: 121 DFHRNRTHGVCSSRFADLVMSSGLLCNDSLTWVTFHSAYDFGYLVKILTRTKLPSRLQDF 180

Query: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240
           LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK
Sbjct: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240

Query: 241 KMSDVYFSKDGPDKHAGVLFGLELY 243
           KMSDVYFSKDGPDKHAGVLFGLELY
Sbjct: 241 KMSDVYFSKDGPDKHAGVLFGLELY 265

[Close]
BLAST of CsGy6G022590 vs. TrEMBL
Match: tr|A0A1S3BNU2|A0A1S3BNU2_CUCME (probable CCR4-associated factor 1 homolog 11 OS=Cucumis melo OX=3656 GN=LOC103491668 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-122
Identity = 221/260 (85.00%), Postives = 227/260 (87.31%), Query Frame = 0 

Query: 6   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDA 65
           RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDA
Sbjct: 1   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 60

Query: 66  LNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGIDFHRN 125
           LNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDFDVAR PH P SIELLKQQGIDFHRN
Sbjct: 61  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 120

Query: 126 RTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQDFLNILK 185
           RTHGVCSS+                       AYDFGYLVKILTRTKLPSRL DFLNIL 
Sbjct: 121 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 180

Query: 186 GLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFKKMSDV 243
            LFG KVYDVKHMMRFCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFKKM DV
Sbjct: 181 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 240

[Close]
BLAST of CsGy6G022590 vs. TrEMBL
Match: tr|A0A2P4LRN0|A0A2P4LRN0_QUESU (Putative ccr4-associated factor 1 like 11 OS=Quercus suber OX=58331 GN=CFP56_27481 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.1e-92
Identity = 174/269 (64.68%), Postives = 201/269 (74.72%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTL------HRHPLRPSDHY 62
           I  R+VW  NL  EF LI  ++ RYP+IS+DTEFPG++ RP++      +  PL+PSDHY
Sbjct: 9   ITIREVWAGNLESEFELIRDVIDRYPYISMDTEFPGLVFRPSVDPSKPYYYRPLQPSDHY 68

Query: 63  LLLKSNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLK 122
            +LKSNVD LNLIQ+GLTLSDA GNLP LG+ N FIWEFNF+DFDVARDPHAPDSI LL 
Sbjct: 69  RVLKSNVDVLNLIQVGLTLSDAAGNLPDLGSGNRFIWEFNFKDFDVARDPHAPDSIALLM 128

Query: 123 QQGIDFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSR 182
           +QGIDF RNR  GV SSR                       AYDFGYLVKILTR  LPS 
Sbjct: 129 RQGIDFERNREEGVDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSE 188

Query: 183 LQDFLNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTF 242
           L +FL IL+  FG +VYDVKHMMRFCD LYGGLDR+A+TL++DRAVGK HQAGSDSLLT+
Sbjct: 189 LDEFLKILRVFFGNRVYDVKHMMRFCDSLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTW 248

[Close]
BLAST of CsGy6G022590 vs. TrEMBL
Match: tr|A0A2R6PQT3|A0A2R6PQT3_ACTCH (CCR4-associated factor 1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26211 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.9e-90
Identity = 172/266 (64.66%), Postives = 204/266 (76.69%), Query Frame = 0 

Query: 6   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRP--TLHRH---PLRPSDHYLLLK 65
           R+VW  NL  EF+LI +L+ RYP+IS+DTEFPGV+ RP  T+  H    LRPSDHY +LK
Sbjct: 18  REVWSANLEAEFDLIRKLIDRYPYISMDTEFPGVVFRPITTVDHHGRRMLRPSDHYKVLK 77

Query: 66  SNVDALNLIQLGLTLSDAHGNLPTL-GTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQG 125
           SNVDALNLIQ+GLTLSDA GNLP L G ++ FIWEFNFRDFD+ARDPHA DSIELL++QG
Sbjct: 78  SNVDALNLIQVGLTLSDAAGNLPDLAGGESCFIWEFNFRDFDLARDPHALDSIELLRRQG 137

Query: 126 IDFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRLQD 185
           IDF RNR+ GV S+R                       AYDFGYLVKILTR  LPSRL+D
Sbjct: 138 IDFDRNRSEGVDSARFAELMMSSGVVCNDSVSWVTFHSAYDFGYLVKILTRRALPSRLED 197

Query: 186 FLNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAF 243
           FL I++  FG  VYDVKH+MRFC  LYGGLDR+A+TL++DRAVGK HQAGSDSLLT+ AF
Sbjct: 198 FLRIMRVFFGNHVYDVKHLMRFCQSLYGGLDRIARTLEVDRAVGKCHQAGSDSLLTWHAF 257

[Close]
BLAST of CsGy6G022590 vs. TrEMBL
Match: tr|A0A2C9V215|A0A2C9V215_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G165000 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89
Identity = 167/268 (62.31%), Postives = 201/268 (75.00%), Query Frame = 0 

Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTL-----HRHPLRPSDHYL 62
           I  R+VW  NL  EF LI  L+  +PFIS+DTEFPG++ RP+L     +    RPSDHY 
Sbjct: 13  IVIREVWSSNLESEFQLIRDLIDGFPFISMDTEFPGLVFRPSLDPTKSYSRQRRPSDHYK 72

Query: 63  LLKSNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQ 122
           +LKSNVDALNLIQ+GLTLSD++GNLP LGT N FIWEFNFRDFDV+RD HAPDSI+LL++
Sbjct: 73  ILKSNVDALNLIQVGLTLSDSNGNLPDLGTANRFIWEFNFRDFDVSRDAHAPDSIDLLRR 132

Query: 123 QGIDFHRNRTHGVCSSR-----------------------AYDFGYLVKILTRTKLPSRL 182
           QGIDF RNR  GV S                         AYDFGYLVKILTR  LP  L
Sbjct: 133 QGIDFERNRDEGVDSGHFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRCLPGGL 192

Query: 183 QDFLNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQ 242
           ++FL++L+  FG +VYD+KHMMRFCD LYGGLDR+A+TLD++RAVGK HQAGSDSLLT+ 
Sbjct: 193 EEFLSLLRVFFGGRVYDLKHMMRFCDSLYGGLDRVARTLDVNRAVGKCHQAGSDSLLTWH 252

The following BLAST results are available for this feature:
BLAST of CsGy6G022590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140166.13.6e-13591.32PREDICTED: probable CCR4-associated factor 1 homolog 9 [Cucumis sativus] >KGN480... [more]
XP_008449941.11.6e-12285.00PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo][more]
XP_022957732.12.4e-10271.48probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata][more]
XP_023534188.12.4e-10271.48probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo] >XP_02... [more]
XP_022995114.13.1e-10271.48probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima][more]
BLAST of CsGy6G022590 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44260.13.0e-8358.27Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G22250.14.4e-8258.58Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.11.2e-5845.77Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT2G32070.15.7e-5845.59Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.38.3e-5745.21Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CsGy6G022590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXM2|CAF1I_ARATH5.4e-8258.27Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9FMS6|CAF1K_ARATH7.9e-8158.58Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9LEU4|CAF1J_ARATH2.1e-5745.77Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9SKZ2|CAF1G_ARATH1.0e-5645.59Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9SAI2|CAF1F_ARATH1.5e-5545.21Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
BLAST of CsGy6G022590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KI60|A0A0A0KI60_CUCSA2.4e-13591.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425790 PE=4 SV=1[more]
tr|A0A1S3BNU2|A0A1S3BNU2_CUCME1.1e-12285.00probable CCR4-associated factor 1 homolog 11 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A2P4LRN0|A0A2P4LRN0_QUESU1.1e-9264.68Putative ccr4-associated factor 1 like 11 OS=Quercus suber OX=58331 GN=CFP56_274... [more]
tr|A0A2R6PQT3|A0A2R6PQT3_ACTCH6.9e-9064.66CCR4-associated factor 1 like OS=Actinidia chinensis var. chinensis OX=1590841 G... [more]
tr|A0A2C9V215|A0A2C9V215_MANES1.5e-8962.31Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G165000 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR006941RNase_CAF1
IPR036397RNaseH_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G022590.1CsGy6G022590.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 133..239
e-value: 4.1E-35
score: 123.2
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 2..132
e-value: 2.4E-49
score: 169.9
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 12..130
e-value: 4.4E-7
score: 29.3
NoneNo IPR availablePANTHERPTHR10797:SF3CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATEDcoord: 3..133
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 3..133
coord: 134..239
NoneNo IPR availablePANTHERPTHR10797:SF3CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATEDcoord: 134..239
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 4..239

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G022590Cla008626Watermelon (97103) v1cgybwmB480
CsGy6G022590Csa6G425790Cucumber (Chinese Long) v2cgybcuB281
CsGy6G022590MELO3C014512Melon (DHL92) v3.5.1cgybmeB432
CsGy6G022590ClCG02G022360Watermelon (Charleston Gray)cgybwcgB403
CsGy6G022590CSPI06G23350Wild cucumber (PI 183967)cgybcpiB287
CsGy6G022590CmaCh02G013110Cucurbita maxima (Rimu)cgybcmaB819
CsGy6G022590CmoCh02G013510Cucurbita moschata (Rifu)cgybcmoB798
CsGy6G022590Cp4.1LG05g04040Cucurbita pepo (Zucchini)cgybcpeB861
CsGy6G022590Cp4.1LG05g04420Cucurbita pepo (Zucchini)cgybcpeB845
CsGy6G022590MELO3C014512.2Melon (DHL92) v3.6.1cgybmedB427
CsGy6G022590CsaV3_6G038490Cucumber (Chinese Long) v3cgybcucB298
CsGy6G022590Cla97C02G048450Watermelon (97103) v2cgybwmbB408
CsGy6G022590Bhi10G000136Wax gourdcgybwgoB568
CsGy6G022590Carg02650Silver-seed gourdcarcgybB0914
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G022590Cucumber (Gy14) v2cgybcgybB106
CsGy6G022590Cucurbita maxima (Rimu)cgybcmaB732
CsGy6G022590Cucurbita maxima (Rimu)cgybcmaB799
CsGy6G022590Cucurbita maxima (Rimu)cgybcmaB856
CsGy6G022590Cucurbita moschata (Rifu)cgybcmoB777
CsGy6G022590Cucurbita moschata (Rifu)cgybcmoB837
CsGy6G022590Cucurbita pepo (Zucchini)cgybcpeB755
CsGy6G022590Cucurbita pepo (Zucchini)cgybcpeB832
CsGy6G022590Cucurbita pepo (Zucchini)cgybcpeB892
CsGy6G022590Cucumber (Chinese Long) v2cgybcuB260
CsGy6G022590Bottle gourd (USVL1VR-Ls)cgyblsiB379
CsGy6G022590Bottle gourd (USVL1VR-Ls)cgyblsiB414
CsGy6G022590Melon (DHL92) v3.5.1cgybmeB428
CsGy6G022590Watermelon (Charleston Gray)cgybwcgB395
CsGy6G022590Watermelon (97103) v1cgybwmB425
CsGy6G022590Wild cucumber (PI 183967)cgybcpiB267
CsGy6G022590Silver-seed gourdcarcgybB0267
CsGy6G022590Silver-seed gourdcarcgybB0421
CsGy6G022590Cucumber (Chinese Long) v3cgybcucB272