CsGy6G008720 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G008720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Calmodulin-related, putative isoform 1
Location	Chr6 : 7264024 .. 7267692 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAATCAAAATATTGGGTTTCTTATGACATTTTAGAAGTAAAGAACAGTCTCAAACAGCAGCCTAAATCAGCGTCAAAAAGTAATCTTTAATGCTTTGAGGCAGTTGTGACCAAAACTCAAATCCAAAATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACCACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGTGATCACTCTCCCTTTCCTGTGCATGTACTGTTGTATTCATGATTCTGGGGTGTTTCTTAGCTTGGTTAACTGATAATTTACTGTTGTGATCATTAATCAACTACTGTGTACATGATGTTCAATGAGTAGAATATTTAACATTTTTCCTGTTTCCATGTTTGTAATATGGTATGGTGAGAATATGAATTCAATAGACAAACATCCCTAAAAGGAGCTTATAAGAATCTTCTTAGTTAGCTTCCTAGGAAAAAAAAACTTTTAAGTCTTTGGTAAAAGAGTTGAGGATGTCTTTCTCCCTTTAGAATTGGTAAAAGAGCTTATTGATGCTAGAGTGGAAATTTTATGAGAAGCTTTGAGGAAGAATTAGAGTTTGTAGGAGGTTATTAGTATTTTTTTCTCTTAGAAAAAAGTCCTGAACAAATTGTGGTGCAACTTTTAATGAAAATAATGTGAAAGAGATCAAGGAGCATGGAAAGATTTGGAGAAAGATAAGAGGATACTTCTAGGTTTTGGGGAGTCTTCCCTATGAGGTTTTGTATTCTTTCTCTGAGCTTTTTGATGGATTACCAAATATGGCAAAAGCATTGTTCAATACTTTAATTGGAAAGGAACCACAGCCCACCAGCTTTCCCTAGCTCTTTGTATACCTCCTTTTTACTCGATAGATTCAGTCATTTTTTGTCTCTCTCTCTCTATATATATTCAGGGTACTTGAGAAGGGGGACTCATAATCAGAACATGTATACTTTTTATGATGGGGTCCTCACAAATATTATGGAACAAGAGCAAAAGTCTCAGTTTCACTTTTAGAAGTAGAGAAAAGAATGCAATTGTGTGTTATCGCATTCAGGGAACTTGAGTCCTGCCCAAAATATATTAAAAAGGAAAATGTATATTCTGCATGTATTTTATGTACAAATGCAAAATTCATCTATTTCAACTCGATCTAGTTGGTGGCCTAAATAGTGGTTAAATTTTATTTCAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGTAGATTCATAATATTCCATCAATATTTTGTAATATAAGAAAGCACAAACACGCTAAATATATCCTATGGTTTCCCAAGCAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGGTAGCATTTTTACTCATAATGTAGTATGATAACCTTGGTGATCCTTTATTCTTCTTTACCTCAATGCTTCTTCTTCTCATCTGATCTGCAGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTGTATATTGGTAAGATATTAACTGCACTTTAAAGTAATATTTACTACTGACCTGTTGAACTTGGCTAATAGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGGTTAGTTTCTTGGTTTCATGTTCTTCTTTCATCTTTTAATCCCATTCGTTCTCTTTATACTATGAATCGTAATCTAATATACATGTTCTTCATTTTGTCATTCAAGTTTTGAAATTTTTATTAACACCATCAAACTTATCCATTATTTTATATTCTTAGTCCTTTCTATAGCTGCATAAAAACACCAATGGCTTACAACATGATACCATATAGAGTTGACTTGTTTAGGAAAAGACATCTTGACATCAATTGCAATGATGTACTGAGTTTAACCTTTTACATTACGTTAACAAACTTCTTCAAGTTATAGTTTTTTCAAAAAAAATTGAAGCATCTTCCATGCTTAATTTTTAAAATGAAACAAGATTTATGAATTATCTTTATGGTGGTTGTTCTGATAATGCGGTATGGTAGTTGGTGCAAAAAAGATCAAAACGTTAATTCTACCTACCAAAGAAATAACAAAATGTACTTTATTTTTTGGACAAGAAAATGAAATAATAATAGTAAAGTGCCTCAATTTCAGCACCGTTGGAAGGCTGCAGATAGTTTGTGTTGTTTTATATCTCAAACTACTGGAATATTTTTCTAACTGAAAATTTCATTATCGACCAGTTACTTATATGAATACTTTTTGGACAAGAAAATGAAATAATAATAGTTGCTTGTTGCTTCATCCAGTAAATATAATTACTTAGATCTAACATCATGACAAACTAATCTTGCTTGTATCTCACCTTTGATGCTCCTCAAGATATACCTGTCCTTCATTTTCTTTTCTATAACAGTTAAGTCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGATGGAATCGGACATTGATAGACTGGTGCACCAATGTGTGAAGGAGAATTTATAGCAAGAATTGAAGAGCATTGTGATATTGAATCTCTGTACATTTTTCTAGGACAATCAAATTCAGGTATGCTCTTTATCCAGCTATTCAGAAGCAAATTGTGAGGGTTGTTGCAAAGAGAATCAAAATTTTCTTGTTGGAAGGAAAAACCCTAACGATCATCATAAGATGAGGGAGAATAATGGCTCTGGACAACAAGAGTATCCGATCATGATTTTGTTGAATTCCAAAATATTAAGGAAAGCATTTGAACTTGTCATTATAATGTAAAACTCTGACCCATGTGTTTCAAGGAAAATATGCATGAGCGCATTCGGTTCTTGTCAAAACTTACTCCTTTCTAAAATTTTGTGTTATGGTAACACTGAATCTAGAATTACAAGATCTTGATTATTATGTCTGTTTGAAGTTTTATTACTCTCGTATTTCTGTTTGACATTGTCCTGTTTTTTAATCTTGTTCGACTATGACATTAGCCGTATTGTAAGTTTAAACTCATTTTCTCTAAATAGTCTATCTTCTTTCCTTAGGTCTTGATTTTCTATGACCTATATAGAGTCTTAAGAGAGATCATGAAAGTAGCAGCAAAAAGCATGAATAAAA

mRNA sequence

CTTAAATCAAAATATTGGGTTTCTTATGACATTTTAGAAGTAAAGAACAGTCTCAAACAGCAGCCTAAATCAGCGTCAAAAAGTAATCTTTAATGCTTTGAGGCAGTTGTGACCAAAACTCAAATCCAAAATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACCACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGTTAAGTCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGATGGAATCGGACATTGATAGACTGGTGCACCAATGTGTGAAGGAGAATTTATAGCAAGAATTGAAGAGCATTGTGATATTGAATCTCTGTACATTTTTCTAGGACAATCAAATTCAGGTATGCTCTTTATCCAGCTATTCAGAAGCAAATTGTGAGGGTTGTTGCAAAGAGAATCAAAATTTTCTTGTTGGAAGGAAAAACCCTAACGATCATCATAAGATGAGGGAGAATAATGGCTCTGGACAACAAGAGTATCCGATCATGATTTTGTTGAATTCCAAAATATTAAGGAAAGCATTTGAACTTGTCATTATAATGTAAAACTCTGACCCATGTGTTTCAAGGAAAATATGCATGAGCGCATTCGGTTCTTGTCAAAACTTACTCCTTTCTAAAATTTTGTGTTATGGTAACACTGAATCTAGAATTACAAGATCTTGATTATTATGTCTGTTTGAAGTTTTATTACTCTCGTATTTCTGTTTGACATTGTCCTGTTTTTTAATCTTGTTCGACTATGACATTAGCCGTATTGTAAGTTTAAACTCATTTTCTCTAAATAGTCTATCTTCTTTCCTTAGGTCTTGATTTTCTATGACCTATATAGAGTCTTAAGAGAGATCATGAAAGTAGCAGCAAAAAGCATGAATAAAA

Coding sequence (CDS)

ATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACCACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGTTAAGTCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGA

Protein sequence

MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGNDSSSSEDEDDSEEGDEDFGSGKVSGSRGTKGKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWSEIELRDMIDCFDNDGDGKLSLDDFRRIAGRCNMIKESIT

Homology

[Close]

BLAST of CsGy6G008720 vs. NCBI nr
Match: XP_004140495.1 (PREDICTED: uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical protein Csa_6G108450 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60
           MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60

Query: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120
           GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS 180
           XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS
Sbjct: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS 180

Query: 181 FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD 240
           FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD
Sbjct: 181 FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD 240

Query: 241 AHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           AHDFTWSEIELRDMID              FRRIAGRCNMIKESIT
Sbjct: 241 AHDFTWSEIELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

[Close]

BLAST of CsGy6G008720 vs. NCBI nr
Match: XP_016902477.1 (PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 230/290 (79.31%), Postives = 240/290 (82.76%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60
           MSNRDLTDSEHDEETPNSSTT SK+KLR SMN R+VKDVPEYEKQRISRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120
           GL K+ATSFLDSSKNLRKTD KGKRKLGEAAD+DY+PG XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHE----DDDDALQQAIKLSLQDSGENSDAQ 180
           XXXXXXX            K   +       +      +   +QAIKLSLQDSGEN DAQ
Sbjct: 121 XXXXXXXTKGKNRGSEQKGKFLSRNQTTLTIKMMMMHYNRFPKQAIKLSLQDSGENLDAQ 180

Query: 181 VQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLK 240
           VQG FENVRRK +KNQEARG MKRKGLFTSRM MNEDELIMNFYCFDESWKGGITV DLK
Sbjct: 181 VQGPFENVRRKKMKNQEARGNMKRKGLFTSRMHMNEDELIMNFYCFDESWKGGITVSDLK 240

Query: 241 RVADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           RVA AHDFTWSEIELRDMIDXXXXXXXXXXXXXX     GRCNMIKESIT
Sbjct: 241 RVAAAHDFTWSEIELRDMIDXXXXXXXXXXXXXXXXXXXGRCNMIKESIT 290

[Close]

BLAST of CsGy6G008720 vs. NCBI nr
Match: XP_022959491.1 (caltractin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 5.5e-74
Identity = 203/281 (72.24%), Postives = 222/281 (79.00%), Query Frame = 0


Query: 6   LTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKM 65
           ++DSE  +E PNSS+T +KK  RGS++G +VKD PEYEKQR+SRIAEN+KRMEALGLAK+
Sbjct: 10  MSDSER-KEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69

Query: 66  ATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXXXXXXX 125
           ATSF+DSSK LRK D KGKRK     D+DY PG    XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 70  ATSFMDSSKTLRKIDRKGKRKF----DEDYNPG--EGXXXXXXXXXXXXXXXXXXXXXXX 129

Query: 126 XXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVR 185
           XXXXXXXXXXXXX            +++DDDALQQAIKLSLQDSGE SDAQ+QG FENVR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXXXXNDEDDDALQQAIKLSLQDSGETSDAQMQGPFENVR 189

Query: 186 RKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFT 245
           RKN+KNQE  GGMKRKGLFTSRMQMNEDELIMNFYCFDESWKG ITV DLKRVA  HDFT
Sbjct: 190 RKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFT 249

Query: 246 WSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           WS  EL DMI+              FRRIA RCNMIKESIT
Sbjct: 250 WSVKELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of CsGy6G008720 vs. NCBI nr
Match: XP_023006622.1 (caltractin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 3.6e-73
Identity = 203/281 (72.24%), Postives = 221/281 (78.65%), Query Frame = 0


Query: 6   LTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKM 65
           ++DSE  +E PNSS   +KK  RGSM+G +VKD PEYEKQR+SRIAEN+KRMEALGLAK+
Sbjct: 10  MSDSER-KEAPNSSIIDTKKTPRGSMSGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69

Query: 66  ATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXXXXXXX 125
           ATSF+DSSK LRK D KGK K     D+DY PG   XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 70  ATSFMDSSKTLRKIDRKGKHKF----DEDYNPG--EXXXXXXXXXXXXXXXXXXXXXXXX 129

Query: 126 XXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVR 185
           XXXXXXXXXXXXX            +++DDDALQQAIKLSLQ+SGE SDAQ+QG FENVR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXXXXNDEDDDALQQAIKLSLQESGETSDAQMQGPFENVR 189

Query: 186 RKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFT 245
           RKN+KNQE  GGMKRKGLFTSRMQMNEDELIMNFYCFDESWKG ITVRDLKRVA  HDFT
Sbjct: 190 RKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVRDLKRVAAVHDFT 249

Query: 246 WSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           WS  EL DMI+              FRRIA RCNMIKESIT
Sbjct: 250 WSVKELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of CsGy6G008720 vs. NCBI nr
Match: XP_023547371.1 (caltractin-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71
Identity = 202/281 (71.89%), Postives = 220/281 (78.29%), Query Frame = 0


Query: 6   LTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKM 65
           ++DSE  +E PNSS+T +KK  RGS++G +VKD PEYEKQR+SRIAEN+KRMEALGLAK+
Sbjct: 10  MSDSER-KEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69

Query: 66  ATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXXXXXXX 125
           ATSF+DSSK LRK D KGKRK     D+DY P    XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 70  ATSFMDSSKTLRKIDRKGKRKF----DEDYNPA--EXXXXXXXXXXXXXXXXXXXXXXXX 129

Query: 126 XXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVR 185
           XXXXXXXXXXXXX            +++DDDALQQAIKLSLQDSGE SDAQVQG  ENVR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXXXLNDEDDDALQQAIKLSLQDSGETSDAQVQGPVENVR 189

Query: 186 RKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFT 245
           RKN+KNQE  GGMKRKGL TSRMQMNEDELIMNFYCFDESWKG ITV DLKRVA  HDFT
Sbjct: 190 RKNVKNQEMGGGMKRKGLSTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFT 249

Query: 246 WSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           WS  EL DMI+              FRRIA RCNMIKESIT
Sbjct: 250 WSVKELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of CsGy6G008720 vs. TAIR10
Match: AT1G73440.1 (calmodulin-related)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-18
Identity = 115/246 (46.75%), Postives = 140/246 (56.91%), Query Frame = 0


Query: 39  VPEYEKQRISRIAENKKRMEALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPG 98
           + +YEKQR+SRIAENK R++ALG++K A + L  S   +K  +  KR  GE         
Sbjct: 33  ISKYEKQRLSRIAENKARLDALGISKAAKALLSPSPVSKKRRV--KRNSGEXXXXXXXXX 92

Query: 99  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDAL 158
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               D    
Sbjct: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---- 152

Query: 159 QQAIKLSLQDSGENSDAQVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMN 218
            +AI LSLQ S   SD                 +EA    K++    S+ QM +DEL+M 
Sbjct: 153 -KAIALSLQGSVAGSD-----------------KEAATMKKKRPELMSKTQMTQDELVMY 212

Query: 219 FYCFDESWKGGITVRDLKRVADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRC 278
           F  FDE  KG IT+RD+ ++A  HDFTW+E EL+DMI               FR+I  RC
Sbjct: 213 FCQFDEGGKGFITLRDVAKMATVHDFTWTEEELQDMIRCFDMDKDGKLSLDEFRKIVSRC 254

Query: 279 NMIKES 285
            M+K S
Sbjct: 273 RMLKGS 254

[Close]

BLAST of CsGy6G008720 vs. TAIR10
Match: AT4G00140.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 43.5 bits (101), Expect = 2.5e-04
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0


Query: 224 ESWKGGITVRDLKRVADAHDFTWSEIELRDMI 256
           E  KG IT RD+ ++A  HDFTW+E EL+DMI
Sbjct: 91  EGGKGFITRRDVAKMATVHDFTWTEEELQDMI 122

[Close]

BLAST of CsGy6G008720 vs. TrEMBL
Match: tr|A0A0A0KDV1|A0A0A0KDV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.6e-117
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60
           MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60

Query: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120
           GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS 180
           XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS
Sbjct: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGS 180

Query: 181 FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD 240
           FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD
Sbjct: 181 FENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVAD 240

Query: 241 AHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           AHDFTWSEIELRDMID              FRRIAGRCNMIKESIT
Sbjct: 241 AHDFTWSEIELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

[Close]

BLAST of CsGy6G008720 vs. TrEMBL
Match: tr|A0A1S4E2M5|A0A1S4E2M5_CUCME (uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-86
Identity = 230/290 (79.31%), Postives = 240/290 (82.76%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60
           MSNRDLTDSEHDEETPNSSTT SK+KLR SMN R+VKDVPEYEKQRISRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXX 120
           GL K+ATSFLDSSKNLRKTD KGKRKLGEAAD+DY+PG XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHE----DDDDALQQAIKLSLQDSGENSDAQ 180
           XXXXXXX            K   +       +      +   +QAIKLSLQDSGEN DAQ
Sbjct: 121 XXXXXXXTKGKNRGSEQKGKFLSRNQTTLTIKMMMMHYNRFPKQAIKLSLQDSGENLDAQ 180

Query: 181 VQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLK 240
           VQG FENVRRK +KNQEARG MKRKGLFTSRM MNEDELIMNFYCFDESWKGGITV DLK
Sbjct: 181 VQGPFENVRRKKMKNQEARGNMKRKGLFTSRMHMNEDELIMNFYCFDESWKGGITVSDLK 240

Query: 241 RVADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKESIT 287
           RVA AHDFTWSEIELRDMIDXXXXXXXXXXXXXX     GRCNMIKESIT
Sbjct: 241 RVAAAHDFTWSEIELRDMIDXXXXXXXXXXXXXXXXXXXGRCNMIKESIT 290

[Close]

BLAST of CsGy6G008720 vs. TrEMBL
Match: tr|A0A2P5BEU0|A0A2P5BEU0_PARAD (Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245540 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.3e-34
Identity = 129/288 (44.79%), Postives = 165/288 (57.29%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLR-GSMNGRNVK-DVPEYEKQRISRIAENKKRME 60
           MS  D +DSE +E T   S+   + K    + NG++ K    EYEKQR+SRIAEN+ RME
Sbjct: 1   MSKGDSSDSESEEATEKWSSDEPETKTETPANNGKSQKGGASEYEKQRLSRIAENRARME 60

Query: 61  ALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXX 120
           ALGL KMA+S + S  N RKT  K K              XXXXXXXXXXXXXXXX    
Sbjct: 61  ALGLPKMASSLMGSPHNSRKTKGKAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDYK 120

Query: 121 XXXXXXXXXXXXXXXXXXXXRKVSV--KKSNNFNHEDDDDALQQAIKLSLQDSGENSDA- 180
                               +KV V  K ++N ++ D+DDAL+ AI LSLQ SGE S + 
Sbjct: 121 GAKSSRSHKRKVKNKVSKYNKKVPVLGKVASNSDYMDEDDALKLAIALSLQYSGEPSQSP 180

Query: 181 QVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDL 240
            +  S  N +R   + Q      K K  F SR+QM EDEL++++Y FD++WKGGI+V+DL
Sbjct: 181 NMANSKVNAKRIKTQTQHVDKRNKGKKSFASRLQMTEDELLVHYYQFDDNWKGGISVKDL 240

Query: 241 KRVADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKE 284
           +RVA AHDFTW++ EL DMI               FR+IA RC+MIKE
Sbjct: 241 ERVATAHDFTWTDQELADMIRCFDSDGDGKLNLDDFRKIAVRCHMIKE 288

[Close]

BLAST of CsGy6G008720 vs. TrEMBL
Match: tr|A0A2K1XR74|A0A2K1XR74_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G060700v3 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 150/286 (52.45%), Postives = 185/286 (64.69%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPNSSTTHSKK--KLRGSMNGRNVKDVPEYEKQRISRIAENKKRME 60
           M+ RDL+ SE DE   +SS    ++  KL+G         + EYEKQR+SRIAENK RME
Sbjct: 1   MAKRDLSGSEPDESENSSSEEEGEEVGKLKG---------ITEYEKQRLSRIAENKARME 60

Query: 61  ALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXX 120
           ALGL KMATS + S +  R+   KGK+K  +  D++Y+P    XXXXXXXXXXXXXXXXX
Sbjct: 61  ALGLNKMATSLMGSVQKSRQR--KGKQKFVD--DEEYRPIDETXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQ 180
           XXXXXXXXXXXXXXXXXXXX  V    S       DDD L QAI LSL DS  ++  +  
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXPVQKHVSGADYIYGDDDELMQAIALSLHDSANDATPK-- 180

Query: 181 GSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRV 240
                 R+ + + QE  G  KRK  F+SR+QM ED+LI++F+ FDE+ KG IT+RDL+RV
Sbjct: 181 -----ERKVDAQVQEDAGRKKRKKAFSSRVQMTEDDLILHFFQFDEAGKGAITMRDLRRV 240

Query: 241 ADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKES 285
           A AHDFTW++ EL DMI               FR+IAGRCNMI+ S
Sbjct: 241 AIAHDFTWTDKELADMIHCFDGDGDGKLSLDDFRKIAGRCNMIQSS 266

[Close]

BLAST of CsGy6G008720 vs. TrEMBL
Match: tr|A0A2P5EBQ8|A0A2P5EBQ8_9ROSA (Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_212520 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.9e-32
Identity = 146/295 (49.49%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 1   MSNRDLTDSEHDEETPN-SSTTHSKKKLRGSMNGRNVK-DVPEYEKQRISRIAENKKRME 60
           MS  D +DSE +E T   SS          + NG++ K    EYEKQR+SRIAEN+ RME
Sbjct: 9   MSKGDSSDSESEEATEKWSSDEXXXXXXXPANNGKSQKGGASEYEKQRLSRIAENRARME 68

Query: 61  ALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXX 120
           ALGL KMA+S + S  N RKT  K                XXXXXXXXXXXXXXXXXXXX
Sbjct: 69  ALGLPKMASSLMGSPHNSRKT--KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXRKVSV---------KKSNNFNHEDDDDALQQAIKLSLQDS 180
           XXXXXXXXXXXXX        KVS          K S+N ++ D+DDAL+ AI LSLQDS
Sbjct: 129 XXXXXXXXXXXXXSHKRKVKNKVSKYNKKVPVLGKVSSNSDYMDEDDALKLAIALSLQDS 188

Query: 181 GENSDA-QVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKG 240
           GE S +  +  S  N ++   + Q+     K K  F SR+QM EDEL++++Y FD++WKG
Sbjct: 189 GEPSQSPNMANSKVNAKKIKTQTQDVDKRNKGKKSFASRLQMTEDELLVHYYQFDDNWKG 248

Query: 241 GITVRDLKRVADAHDFTWSEIELRDMIDXXXXXXXXXXXXXXFRRIAGRCNMIKE 284
           GI+V+DL+RVA AHDFTW++ EL DMI               FR+IA RC+MIKE
Sbjct: 249 GISVKDLERVATAHDFTWTDQELADMIRCFDSDGDGKLNLDDFRKIAVRCHMIKE 301

The following BLAST results are available for this feature:

BLAST of CsGy6G008720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140495.1	2.4e-117	95.10	PREDICTED: uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hy...	[more]
XP_016902477.1	2.2e-86	79.31	PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo]	[more]
XP_022959491.1	5.5e-74	72.24	caltractin-like isoform X2 [Cucurbita moschata]	[more]
XP_023006622.1	3.6e-73	72.24	caltractin-like isoform X2 [Cucurbita maxima]	[more]
XP_023547371.1	1.2e-71	71.89	caltractin-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G008720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73440.1	4.0e-18	46.75	calmodulin-related	[more]
AT4G00140.1	2.5e-04	59.38	Calcium-binding EF-hand family protein	[more]

BLAST of CsGy6G008720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G008720 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDV1\|A0A0A0KDV1_CUCSA	1.6e-117	95.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1	[more]
tr\|A0A1S4E2M5\|A0A1S4E2M5_CUCME	1.4e-86	79.31	uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=...	[more]
tr\|A0A2P5BEU0\|A0A2P5BEU0_PARAD	6.3e-34	44.79	Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245540 PE=4 SV=1	[more]
tr\|A0A2K1XR74\|A0A2K1XR74_POPTR	3.1e-33	52.45	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G060700v3 PE=...	[more]
tr\|A0A2P5EBQ8\|A0A2P5EBQ8_9ROSA	5.9e-32	49.49	Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_212520 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR003903	UIM_dom
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G008720.1	CsGy6G008720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 250..278 e-value: 2.2E-4 score: 30.6
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 227..272 e-value: 1.3E-7 score: 31.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 246..281 score: 11.752
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 205..279 e-value: 2.8E-11 score: 45.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..155
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 259..271
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 153..172 score: 9.497
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 215..274

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G008720	Cla006687	Watermelon (97103) v1	cgybwmB509
CsGy6G008720	Csa6G108450	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G008720	MELO3C022245	Melon (DHL92) v3.5.1	cgybmeB381
CsGy6G008720	ClCG06G002820	Watermelon (Charleston Gray)	cgybwcgB438
CsGy6G008720	CSPI06G08620	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G008720	CmaCh17G004990	Cucurbita maxima (Rimu)	cgybcmaB763
CsGy6G008720	CmoCh17G004720	Cucurbita moschata (Rifu)	cgybcmoB744
CsGy6G008720	Lsi09G016590	Bottle gourd (USVL1VR-Ls)	cgyblsiB364
CsGy6G008720	Cp4.1LG12g04270	Cucurbita pepo (Zucchini)	cgybcpeB732
CsGy6G008720	MELO3C022245.2	Melon (DHL92) v3.6.1	cgybmedB385
CsGy6G008720	CsaV3_6G008990	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G008720	Cla97C06G112190	Watermelon (97103) v2	cgybwmbB446
CsGy6G008720	Bhi12G001935	Wax gourd	cgybwgoB522
CsGy6G008720	Carg26673	Silver-seed gourd	carcgybB0888

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G008720	Cucurbita maxima (Rimu)	cgybcmaB867
CsGy6G008720	Cucurbita moschata (Rifu)	cgybcmoB851
CsGy6G008720	Cucurbita pepo (Zucchini)	cgybcpeB790
CsGy6G008720	Bottle gourd (USVL1VR-Ls)	cgyblsiB366
CsGy6G008720	Silver-seed gourd	carcgybB0603