Carg26673 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26673
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Calmodulin-related, putative isoform 2
Location	Cucurbita_argyrosperma_scaffold_268 : 112880 .. 116528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAAATGGATCCTATCATCCGAACTACCATGACCCTGTAACGAAGGGTGCTGCTTATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAGGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGTAATCTCTCTCCATTTTCTGTTATTGTGTACTTTTACCATTGTACAAAAATTAATTTGTTGGTCGCTGCATTGTTCATGATTCAGCAATGTTCCTTAGGTTGATTCACTGTTAGTTTCCTGTTGGGATCCTTAATTTTGGTTGTGTATATTATCTTAATTAAGTCGAATATTTAACAATTTGCCTGTTTCTATGTCTGTAATATCCATCAAAGATGGAGATAAATGCTGAGAGTATATATGTTTTTAGAAAGAAGACATTATTCATTGGTATGATGAAAAGATGAACTCAGTGTCACCTTTTATCTCAGTAATCAAGGCTTTGAATGGAGAGTTGGCTTCATTGTTTCATTTAAGTGAAGTGGAAAATATAAGTCTTGGCCAAGGAGTTGAGGGAGCCTTTCTCCCTTCAGAATTGGGGAAGAACCTATTGATGCTAGAGTGAAAATGGTATCAGAAGCTTTGGGAAAGAATTAGAGCTTGAAGGAGTTTTTTAGTTGTTTTGTTTTTTCTTTGAAAGAAAAAAAGTCGATCAAATTTTGGTTCAATTTTAAATGAAAAGAATGAGAAATAGATCAAAGGAGCGGGAGGGGGGATTGAAGAAGTAGATAAGAGGGCTTTCTGGGTTTGTGGAGGATACACATCTAGGTTTTTGGGAGTCTTCCATTGGCCTTTGTATTCTTTCTTTTGAGGTTTTTGGTGGATTACCAAATCAAGTATGCCAAAAACATTGTTCAGACCCACCAGCATGATTGTAACAAAGAAGTCTGGTTTGGTCTCTGTATCTAGATCAAAGAGTTTCTTTCTTTGGTTGGAAGGGATTGATGGAGAAGTACTAGCTCTCGTTCCCTTCCTACGAAAGAAAGTCGTATATCAAGTAGAGAAATGATGACTAGCGCTTTTTGTTTTCTCAAGATGGAACCAAGATTCTGTTTGTACCTCATTTGCATCCAATTTGGTAATCTCGGCCTACGAATGCCTCTTGTTTGAAAGCTTTTCAACCCATAATAGCTTGCAATAGTCAACTAACCAGGACACGTTTCCCCAGTGGAGGGTTAAGGAAAAATCATATTATCTTGTCCATATTTGATAATCCATGCTTTACTTTCTTCGTAATTTTCATCACCTCAATGGAGTAAGATTTCCTGTCAACAGAGATCGTGTGTTTTGAGTAGTTTCCAACCCATTGGAAAGAGGAGGGATCAGAAAGTAAGGAGGGAGCTTGCATTTTTGTGCAGGAAATTTCCTCGGTTATAGCTTATATGCTATTGCCTTTTTCTTTTTCCTTTTGATAAGAAACCAGAGGATAACATTAATAGCAAAAAAGGAAAAAACAACCTAAGGGTTGTAGAAAGAGAACCCCCTCATGAAGAGCTAATCACAGGAACACCTTCCAGTCATGGAGAAATATGTCACTGTCAATTGTATGCTGTATTATAACTTGAGTTGCTGAAATGGGGAACAATTTGATCTGAACTTATATTCTATCAAGAAATTGTGGTGTGGGCTAGTCTTGATGATTATCCCTTTTGCTGAAGAGTTCTGGCTCATGTACAGTCAAGTTCTTGCAATTTGACTCCAGATTCCTCAGTCTCAGGTAATTGACAGAGAACTAGCTGGCTGTGTTAAAAATTCCTAAAACAGTCGGGAGTGTTCTTTTGGGATTCAAGTCTTAACAGCATCAGCATTATGAAATGAATATAGCACAAAGGAGGAATGTCTTGTTTCATGCACCTTTTTTTCTTCTTTATGTCAATTATAAGGCAGAATGTTGAGGATGTTAACCATTTATGTTTACAATCTGAGTGGGCCTGTAGTTGTTAAAATAATTTATTTGGCTCTTATATGTGAATCGGGCGTCTCCTATGGATATGGAGGCAACCTCTCAGGTATTTGGAGGCTTTAAGTTGGGAATGACAGGTCTTATTTTGTCACTTATTGAGTGTAAAGCTTTCCGTCGGTGGTTTTTTCCTGGTGTAAAACAGTAGGATTTCTAAAAATTCCTTCATACTAGACTGTTCCCTTAGGTAAAAACGTGTGTTACTCATAGATAGATTATGAAGTCGAAGGGGAATTATTTTTGTACTTCTTGACTAAACCATGGGCTATAGCTTATCTCCTTCCATTTTTTGCATACTTTTTCTTTCATTTTATAGATGAAAGCCTTCTTCGTTTCCCCCCAAAAAAAAAAACGTACTTGTCGTTGGAAAACCATGTATTGTTTCTAGCTTCATTTCCGAGAAAAACCTTTTTTTTTTTAGTTAAATGGGGATATATATTATATTGGGGGCACTAAAAGAAGGTGAACTGTAGTCGAAACATTTATACTTTCTCTCATGGAGTTAATTGGTGGTATGAAACAAGGGCACAAATCTCTGTTTTTATTTATGTTATTGCATTTTGGTGTGTTTCATGCCTACAAGGAAGTTGTCCTGGCCAAAATATATTAAAAAGGAAAATATATCCTGCACGTTTTTTACGTACAAACGTGAATTTCATCTATTTCAGTACATTCTAATTGGTGCAGTCTGAAAATTGTTCAAATTTTATTTCAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGTAGATTCATAATATTCCATCGGTACTTTGTAATTCAAGACAGCACAAACAGGCTAACAATATCATATGCTTCCCAAGCAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGGTAGCCTTTTCACTCATAACGTAGTATTATAGCCTTAGTGATCCTTTATTCATCTTTTCTCTTAATTCTTTTTCTTTCACATCTGAACTGCAGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATCTTATATATCTGGTATGATATTAATGCACTTTAAAGTAAGTTTTACTACTGACCTGGTGAACTTGGCTTATAGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAG

mRNA sequence

ATTTCAAATGGATCCTATCATCCGAACTACCATGACCCTGTAACGAAGGGTGCTGCTTATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAGGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAG

Coding sequence (CDS)

ATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAGGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAG

Protein sequence

MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKVSRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFTWSVKELEDMINCFDSDGDAK

Homology

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BLAST of Carg26673 vs. NCBI nr
Match: XP_022959490.1 (uncharacterized protein LOC111460448 isoform X1 [Cucurbita moschata])

HSP 1 Score: 392.9 bits (1008), Expect = 8.6e-106
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDT+KTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDXXXXXXXXXXXXXXXXXXXXX 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGE XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           XXXXXXXXXXXXXXXXXXXXXXXXX  NDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAK 263
           FTWSVKELEDMINCFDSDGDAK
Sbjct: 241 FTWSVKELEDMINCFDSDGDAK 262

[Close]

BLAST of Carg26673 vs. NCBI nr
Match: XP_022959491.1 (caltractin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 392.9 bits (1008), Expect = 8.6e-106
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDT+KTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDXXXXXXXXXXXXXXXXXXXXX 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGE XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           XXXXXXXXXXXXXXXXXXXXXXXXX  NDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAK 263
           FTWSVKELEDMINCFDSDGDAK
Sbjct: 241 FTWSVKELEDMINCFDSDGDAK 262

[Close]

BLAST of Carg26673 vs. NCBI nr
Match: XP_023547370.1 (uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 253/262 (96.56%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR QHDTPMSDSERKEAPNSSSTDT+KTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDXXXXXXXXXXXXXXXXXXXXX 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNP E XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPAEXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           XXXXXXXXXXXXXXXXXXXXXXXXX LNDEDDDALQQAIKLSLQDSGETSDAQ+QGP EN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXLNDEDDDALQQAIKLSLQDSGETSDAQVQGPVEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGL TSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLSTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAK 263
           FTWSVKELEDMINCFDSDGDAK
Sbjct: 241 FTWSVKELEDMINCFDSDGDAK 262

[Close]

BLAST of Carg26673 vs. NCBI nr
Match: XP_023547371.1 (caltractin-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 253/262 (96.56%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR QHDTPMSDSERKEAPNSSSTDT+KTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDXXXXXXXXXXXXXXXXXXXXX 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNP E XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPAEXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           XXXXXXXXXXXXXXXXXXXXXXXXX LNDEDDDALQQAIKLSLQDSGETSDAQ+QGP EN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXLNDEDDDALQQAIKLSLQDSGETSDAQVQGPVEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGL TSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLSTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAK 263
           FTWSVKELEDMINCFDSDGDAK
Sbjct: 241 FTWSVKELEDMINCFDSDGDAK 262

[Close]

BLAST of Carg26673 vs. NCBI nr
Match: XP_023006622.1 (caltractin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 6.4e-101
Identity = 249/262 (95.04%), Postives = 252/262 (96.18%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR Q DTPMSDSERKEAPNSS  DT+KTPRGS+SGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQRDTPMSDSERKEAPNSSIIDTKKTPRGSMSGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDXXXXXXXXXXXXXXXXXXXXX 120
           EALGLAKLATSFMDSSKTLRKIDRKGK KFDEDYNPGE XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKHKFDEDYNPGEXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           XXXXXXXXXXXXXXXXXXXXXXXXX  NDEDDDALQQAIKLSLQ+SGETSDAQMQGPFEN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXNDEDDDALQQAIKLSLQESGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITV DLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVRDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAK 263
           FTWSVKELEDMINCFDSDGDAK
Sbjct: 241 FTWSVKELEDMINCFDSDGDAK 262

[Close]

BLAST of Carg26673 vs. TAIR10
Match: AT1G73440.1 (calmodulin-related)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 115/220 (52.27%), Postives = 139/220 (63.18%), Query Frame = 0


Query: 44  EYEKQRLSRIAENRKRMEALGLAKLATSFMDSSKTLRKIDRKGKRKFDE-DYNPGEDXXX 103
           +YEKQRLSRIAEN+ R++ALG++K A + +  S   +K  R+ KR   E        XXX
Sbjct: 35  KYEKQRLSRIAENKARLDALGISKAAKALLSPSPVSKK--RRVKRNSGEXXXXXXXXXXX 94

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLS 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +AI LS
Sbjct: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKAIALS 154

Query: 164 LQDSGETSDAQMQGPFENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDES 223
           LQ S   SD                 +E     K++    S+ QM +DEL+M F  FDE 
Sbjct: 155 LQGSVAGSD-----------------KEAATMKKKRPELMSKTQMTQDELVMYFCQFDEG 214

Query: 224 WKGSITVSDLKRVAAVHDFTWSVKELEDMINCFDSDGDAK 263
            KG IT+ D+ ++A VHDFTW+ +EL+DMI CFD D D K
Sbjct: 215 GKGFITLRDVAKMATVHDFTWTEEELQDMIRCFDMDKDGK 235

[Close]

BLAST of Carg26673 vs. TAIR10
Match: AT4G00140.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 221 ESWKGSITVSDLKRVAAVHDFTWSVKELEDMINCFDSDGDAK 263
           E  KG IT  D+ ++A VHDFTW+ +EL+DMI  FD D D K
Sbjct: 91  EGGKGFITRRDVAKMATVHDFTWTEEELQDMIRSFDMDKDGK 132

[Close]

BLAST of Carg26673 vs. TrEMBL
Match: tr|A0A0A0KDV1|A0A0A0KDV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.5e-71
Identity = 196/260 (75.38%), Postives = 217/260 (83.46%), Query Frame = 0


Query: 10  MSDSER-KEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69
           ++DSE  +E PNSS+T ++K  RGS++G +VKD PEYEKQR+SRIAEN+KRMEALGLAK+
Sbjct: 6   LTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKM 65

Query: 70  ATSFMDSSKTLRKIDRKGKRKF----DEDYNPGEDXXXXXXXXXXXXXXXXXXXXXXXXX 129
           ATSF+DSSK LRK D KGKRK     D+DY PG  XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 66  ATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGXXXXXXXXXXXXXXXXXXXXXXXXXXX 125

Query: 130 XXXXXXXXXXXXXXXXXXXXXN--LNDEDDDALQQAIKLSLQDSGETSDAQMQGPFENVR 189
           XXXXXXXXXXXXX        N   +++DDDALQQAIKLSLQDSGE SDAQ+QG FENVR
Sbjct: 126 XXXXXXXXXXXXXRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVR 185

Query: 190 RKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFT 249
           RKN+KNQE   GMKRKGLFTSRMQMNEDELIMNFYCFDESWKG ITV DLKRVA  HDFT
Sbjct: 186 RKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFT 245

Query: 250 WSVKELEDMINCFDSDGDAK 263
           WS  EL DMI+CFD+DGD K
Sbjct: 246 WSEIELRDMIDCFDNDGDGK 265

[Close]

BLAST of Carg26673 vs. TrEMBL
Match: tr|A0A1S4E2M5|A0A1S4E2M5_CUCME (uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.8e-59
Identity = 169/255 (66.27%), Postives = 188/255 (73.73%), Query Frame = 0


Query: 10  MSDSER-KEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKL 69
           ++DSE  +E PNSS+TD+++  R S++   VKD PEYEKQR+SRI EN+KRMEALGL KL
Sbjct: 6   LTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEALGLGKL 65

Query: 70  ATSFMDSSKTLRKIDRKGKRKF----DEDYNPGEDXXXXXXXXXXXXXXXXXXXXXXXXX 129
           ATSF+DSSK LRK DRKGKRK     DEDY PG+ XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 66  ATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQXXXXXXXXXXXXXXXXXXXXXXXXXX 125

Query: 130 XXXXXXXXXXXXXXXXXXXXXN------LNDEDDDALQQAIKLSLQDSGETSDAQMQGPF 189
           XX                          +    +   +QAIKLSLQDSGE  DAQ+QGPF
Sbjct: 126 XXTKGKNRGSEQKGKFLSRNQTTLTIKMMMMHYNRFPKQAIKLSLQDSGENLDAQVQGPF 185

Query: 190 ENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAV 249
           ENVRRK +KNQE    MKRKGLFTSRM MNEDELIMNFYCFDESWKG ITVSDLKRVAA 
Sbjct: 186 ENVRRKKMKNQEARGNMKRKGLFTSRMHMNEDELIMNFYCFDESWKGGITVSDLKRVAAA 245

Query: 250 HDFTWSVKELEDMIN 254
           HDFTWS  EL DMI+
Sbjct: 246 HDFTWSEIELRDMID 260

[Close]

BLAST of Carg26673 vs. TrEMBL
Match: tr|A0A2K1XR74|A0A2K1XR74_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G060700v3 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 143/257 (55.64%), Postives = 174/257 (67.70%), Query Frame = 0


Query: 10  MSDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLA 69
           +S SE  E+ NSSS +  +        G +K   EYEKQRLSRIAEN+ RMEALGL K+A
Sbjct: 6   LSGSEPDESENSSSEEEGE------EVGKLKGITEYEKQRLSRIAENKARMEALGLNKMA 65

Query: 70  TSFMDSSKTLRKIDRKGKRKF--DEDYNPGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 129
           TS M S +  R+  RKGK+KF  DE+Y P ++ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 66  TSLMGSVQKSRQ--RKGKQKFVDDEEYRPIDETXXXXXXXXXXXXXXXXXXXXXXXXXXX 125

Query: 130 XXXXXXXXXXXXXXXXXXNLN--DEDDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKN 189
           XXXXXXXXXXX         +    DDD L QAI LSL DS   +  +        R+ +
Sbjct: 126 XXXXXXXXXXXPVQKHVSGADYIYGDDDELMQAIALSLHDSANDATPK-------ERKVD 185

Query: 190 VKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFTWSV 249
            + QE     KRK  F+SR+QM ED+LI++F+ FDE+ KG+IT+ DL+RVA  HDFTW+ 
Sbjct: 186 AQVQEDAGRKKRKKAFSSRVQMTEDDLILHFFQFDEAGKGAITMRDLRRVAIAHDFTWTD 245

Query: 250 KELEDMINCFDSDGDAK 263
           KEL DMI+CFD DGD K
Sbjct: 246 KELADMIHCFDGDGDGK 247

[Close]

BLAST of Carg26673 vs. TrEMBL
Match: tr|A0A1Q3B209|A0A1Q3B209_CEPFO (EF_hand_5 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05571 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 136/226 (60.18%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 44  EYEKQRLSRIAENRKRMEALGLAKLATSFMDSSKTLRKIDRKGKRKF---DEDYNPGEDX 103
           +YEKQRLSRIA+NR RMEALGL K+A+S M S+++ +  DRKGKRK    DEDY     X
Sbjct: 37  DYEKQRLSRIAQNRARMEALGLPKIASSLMGSAQS-KSSDRKGKRKVISDDEDYRXXXXX 96

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLND----EDDDALQ 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + +D     DDD L 
Sbjct: 97  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLSSSDYIDGGDDDELM 156

Query: 164 QAIKLSLQDSGETSDAQMQGPFENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNF 223
           QAI LSLQDS     AQ+ G    +R K    ++ GR  KRK   TSR+QM EDE++++F
Sbjct: 157 QAIALSLQDS-----AQVSGGVSKIRGKARAQEDTGR-RKRKNSITSRVQMTEDEVVLHF 216

Query: 224 YCFDESWKGSITVSDLKRVAAVHDFTWSVKELEDMINCFDSDGDAK 263
           + FDE+  GSITV DL+RVA  HDF W+ KEL DMI+CFD++ D K
Sbjct: 217 FQFDEAGAGSITVRDLRRVAIAHDFIWTDKELADMIHCFDTNSDGK 255

[Close]

BLAST of Carg26673 vs. TrEMBL
Match: tr|A0A103XUD3|A0A103XUD3_CYNCS (Calcium-binding EF-hand OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_000814 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.6e-29
Identity = 102/267 (38.20%), Postives = 144/267 (53.93%), Query Frame = 0


Query: 11  SDSERKEAPNSSSTDTRKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLAT 70
           SDSE +E      T +  TP+ + +GG  ++  +YEKQR+ RI EN+ RM+A+GL K+A+
Sbjct: 7   SDSETEE------TGSDLTPQRNGTGGS-ENMTDYEKQRMKRIEENKARMKAMGLDKMAS 66

Query: 71  SFMDSSKTLRKIDRKGKRKF----DEDYNP-GEDXXXXXXXXXXXXXXXXXXXXXXXXXX 130
           S M S    +   +KGK+K     DE+Y P G+D                         X
Sbjct: 67  SLMGSVPISQNAKKKGKKKVGLEDDEEYKPSGKD-----------------EELSSSSGX 126

Query: 131 XXXXXXXXXXXXXXXXXXXXNLNDEDDDALQQAIKLSLQDSGETSDAQMQGP-------- 190
           XX                  +  D+DDDAL +AI LSLQDS    D   + P        
Sbjct: 127 XXDDYDDEFRVSRTKLSGNSDFVDDDDDALMKAIALSLQDSPGFLDVASKTPPQNSDANA 186

Query: 191 --FENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRV 250
              EN+ RK + +++     KRK  FTSR+QM+EDELI++F+ FDE+ KG I + D++R+
Sbjct: 187 SIVENIDRKQIISKDDSGKRKRKNSFTSRVQMSEDELILHFFQFDEAGKGGINLRDVRRI 246

Query: 251 AAVHDFTWSVKELEDMINCFDSDGDAK 263
           AA HDF W+ +E+E+MI  FDSDGD K
Sbjct: 247 AASHDFMWTDEEMENMIRFFDSDGDGK 249

The following BLAST results are available for this feature:

BLAST of Carg26673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959490.1	8.6e-106	98.09	uncharacterized protein LOC111460448 isoform X1 [Cucurbita moschata]	[more]
XP_022959491.1	8.6e-106	98.09	caltractin-like isoform X2 [Cucurbita moschata]	[more]
XP_023547370.1	6.8e-103	96.56	uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023547371.1	6.8e-103	96.56	caltractin-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023006622.1	6.4e-101	95.04	caltractin-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg26673 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73440.1	1.2e-16	52.27	calmodulin-related	[more]
AT4G00140.1	6.5e-07	54.76	Calcium-binding EF-hand family protein	[more]

BLAST of Carg26673 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26673 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDV1\|A0A0A0KDV1_CUCSA	3.5e-71	75.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1	[more]
tr\|A0A1S4E2M5\|A0A1S4E2M5_CUCME	6.8e-59	66.27	uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=...	[more]
tr\|A0A2K1XR74\|A0A2K1XR74_POPTR	6.0e-31	55.64	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G060700v3 PE=...	[more]
tr\|A0A1Q3B209\|A0A1Q3B209_CEPFO	2.3e-30	60.18	EF_hand_5 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v...	[more]
tr\|A0A103XUD3\|A0A103XUD3_CYNCS	9.6e-29	38.20	Calcium-binding EF-hand OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_000...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR003903	UIM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26673-RA	Carg26673-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 200..262 e-value: 5.5E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..194
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 150..169 score: 9.456
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 202..261

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26673	Cla006687	Watermelon (97103) v1	carwmB0902
Carg26673	Csa6G108450	Cucumber (Chinese Long) v2	carcuB0915
Carg26673	MELO3C022245	Melon (DHL92) v3.5.1	carmeB0887
Carg26673	ClCG06G002820	Watermelon (Charleston Gray)	carwcgB0877
Carg26673	CSPI06G08620	Wild cucumber (PI 183967)	carcpiB0936
Carg26673	Cucsa.120780	Cucumber (Gy14) v1	carcgyB1018
Carg26673	CmaCh17G004990	Cucurbita maxima (Rimu)	carcmaB1239
Carg26673	CmoCh17G004720	Cucurbita moschata (Rifu)	carcmoB1210
Carg26673	Lsi09G016590	Bottle gourd (USVL1VR-Ls)	carlsiB821
Carg26673	Cp4.1LG12g04270	Cucurbita pepo (Zucchini)	carcpeB1250
Carg26673	CsGy6G008720	Cucumber (Gy14) v2	carcgybB0888
Carg26673	MELO3C022245.2	Melon (DHL92) v3.6.1	carmedB0895
Carg26673	CsaV3_6G008990	Cucumber (Chinese Long) v3	carcucB0938
Carg26673	Cla97C06G112190	Watermelon (97103) v2	carwmbB0942
Carg26673	Bhi12G001935	Wax gourd	carwgoB1045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26673	Bottle gourd (USVL1VR-Ls)	carlsiB820