CsGy6G006410 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAACTCTAATATCAATGGTTGGAAAAAACCTTTAGCATCAAAACTAAGAAAAATCATGGTTACCATGAAGAAATCTATCTTGTTAAAAAAATATTACAATCACACATAACTCTAAAAACTCATTTTTCACCCTATGAAAGATTGGAGAATACAAAGAAAGAAATTTGATTTGAGTTAGTGAACTTGAAATGAAAATATTTCTAACTACAACAATTTGAAACAAAAACAAAGTAACTCGGATCTATGAGTATTTTGTTTTTTTTGGTGAGTTAATGGGATGAGGAATTGGAAAAGAAAGAGTATTTGATTACTACAAGAAGAGTTGGTTGTTCCCCATCGTACAAAATCGATCGATAGTGTGTTGCTGTTCGTTGTTCATCCCCAAACAAAAAGAGATGGTGTGAAGAATCAAAGCATTTTAGCTAATTTTTTACGACTCCTAAATTCCTCAGCCACAAACCAACGGAGCTTCACAGCCACACAAATGGCCTCCTCTCTTTTCCGCCTTGTTGTCTCCACCATCTTTCTTGATTTTGATTTCCCTGAATCCTCAACCCTTATCCCTTCACCCACCCTTCTCTTTCCTTCTTCAATCCTCCACCTTTTACTTCCCTTTCTCTATCCCCTTCTTTCTCCGTTCTTATTCACTAAAACCCATTTTTCCTCTTCTTCCTCCTTTCCATCTCTCCGGCGCTACTGTTCTACTGGCGGTTTAATTTCATGGGTTTCTTGATCTTGGAGTAGGAAACAGGGAAGTGGGGTTTCTGCGAATCTATTCAAAATCTTAGTTGTTGTTCAGAGGGAGAAGATGAAAATTCAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCCAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTTTCCACCAAGCTACCTAAATGCGATATATGCCAAGTAATTACCATCTCTCTTGCTTTACCTTGGTATATTGCTCTTTCATTTGCTAGTTTTGTCGATCTGATGGTCTTTGTTCTGATTTGATGTGTATAAATTAACGATCTTGAGTGTAGGGATGATTATCTCAATAAAATTTACTTAAATCACTACGAAATCCAAAGCTTTGAGCTTTTGTGTATACTCTTAGCACTCTCTCTCACTCGTGAGTATGAAAGTTGGTGACTAGCGATGTTAATCGGGAGGGAAACAAGGTGGAAGAAGTTTGAACACTGGACATTTGGTTGTTACTTGACTTTGAGTAGTTGGAGCTTGAATATAGAATCTTTGATACCACACTAAATTTATCTGTATGCTAAAAGATTTGAGCTTATAAACTATGGAAAATTTGATTTTTTTGTATATAATCTCTCAACACATGACATGATATAATATCAACACGTCTGGTCACTTCATTCTCCCTGATGTCATATCATTTAACACTCCTTGATTGTCAGATGATACTTCGATACTGATTTTAAATTTGCTTCCAGATCTAGAATTGGCATTTCTTTTGAATAAACCAGATAAATATCTCTAATCATGCTTCGTCCTTATGATATTTTGATTTTACATTTTTTATAATGGTTTAGATTTTCTTTCTATTTGTGAAATGTTAGACTTAGGGAATCCTATATGAAGTGCATGCATCATGATTTGTTTATGCAGTTAACTGTTAAGGTCTCTAATTGATGTAGTTGTCAGTGGGTAATGACACTGAAAACATGGTTGACCAATATTTGGAAGAAGAGAAAAAAATGAAAAGATATATCATATATGTAAGTTATAAATCACCATTGTTAGTTAAATACTTAAATTATAGTAAGTTAATTGTAGAGAGTCAGAATTGAATTTTTCTAATTTACCTTGAAGGATGTCCATTTTTTTGTATAAATTAGGAAGACTTTTACATGAGATGTAATGTGCTGAGTATTTTATGTCTCATCTGGAATCAGGACAAGGCAGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATCCATTCAAGTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGCTGCACGAAGGAAGTTGACAAGGTCAAGATGGAACCTCCAAATCCAAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCTAACTTCACGTCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCGGACAAGGTTAGTAACAGCTAGATGCTCACCTTCTAGGCATCCATTTATTTACATTTTGTGGATCATAATGCAACAGAGGAAGTGCGCTTCTTTATACTCTTGAAGAATTTATACCATCATCTTTAGTTTAAATAGTTCTCACTACTTAGAAGGCATAAGTTTTTGAATGCTTACATTCCTCTTCCTGCATATGTTCACTGGTGACCGCCATTTTTTTTCTCCCAAAGATCACATACACACTAATTTTATTAAAAGGTTCCTAAATATTAGATCATTAGTTCGAATCCATACCCTGTAGTTTCTTCTGAGATTTTTGTCATAGGATTTGCATTAGTTTCCATCTACTTTAAGATTATTTGGGATACGCACTTAATCCTCCACCACCATAACTGCAGCAGAAGGAACAACTAGAGTTTGGGGAATTAGAATGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCAGCTGCTGAAGTTCCTGAGCTTCCTACATCATACTCAGGTAATGCAATTGCCTGCAGACCGACGAAGTCAAGCACATCATACAAAAAGCCTAGGCTTGAGATGGTTGACGACGAAGAGTTTTTTACGGTTCCTGATCTTGGATGAACAGAAGAGAGTGGCATTGATGTTGAGTTGGTATGCTTAATGAATAATAATAATACAGTTTTATAACCTTACAAAATGTGTATGTATGTAGTGTTTTCAACATCTATGGTTTGATAGTATGCAATATAGTATTCTTCTTTTATCTTATGCTTAGAATATATTCGCTCACTCCTCCTGGTTACTTTTGCTTTTGTATCTTATTAACCTTATTGTAACTTTTTGAATCTTATATGAAAAGTGTAAGATTATTTTAAAGAATGTCAACCATGTTTTGAAAGATTGAAGCTATTTGTTTTCTTGCACTTCCTCCTCTCCCCCTCCCCCACACATGGGCTGAAGGGTCAACACATGTTCGAGATTCTTTATCTCCGATACTTGTTGGACATGTATCATATACCTGTTTGACTCATGTTAAACCTTTGAAAATGCATATTTTAATGCTTTGTTGCGTTCATGTTTTAGATTTTTAAAAGTAATGCCACCAAGTTTATGTGCTTCTCTCGTCTTTGCTCATGTTCTTACAGCTAGGGTTATTGATCAGGATGGGACTCTAAAGACAGAGATAAAAGAGAGAAATTTTACAAATGTGACTTTTGTCATTAGTTTACTAAATTGTGGGATGTTGAAACACCATTTCATTTTATTAATGCTCACTTTGTATTTTTATTATTTGATTAATTGTACCAATTTGATTTTTAAACCTTTATAAATTGTAAGTACATAAATACACCATTTTCTAGATTTTGTTCTACTGTTTTTTGGAACTTATAATTTATATACCTTAAACTCCTAAA TAAAACTCTAATATCAATGGTTGGAAAAAACCTTTAGCATCAAAACTAAGAAAAATCATGGTTACCATGAAGAAATCTATCTTGTTAAAAAAATATTACAATCACACATAACTCTAAAAACTCATTTTTCACCCTATGAAAGATTGGAGAATACAAAGAAAGAAATTTGATTTGAGTTAGTGAACTTGAAATGAAAATATTTCTAACTACAACAATTTGAAACAAAAACAAAGTAACTCGGATCTATGAGTATTTTGTTTTTTTTGGTGAGTTAATGGGATGAGGAATTGGAAAAGAAAGAGTATTTGATTACTACAAGAAGAGTTGGTTGTTCCCCATCGTACAAAATCGATCGATAGTGTGTTGCTGTTCGTTGTTCATCCCCAAACAAAAAGAGATGGTGTGAAGAATCAAAGCATTTTAGCTAATTTTTTACGACTCCTAAATTCCTCAGCCACAAACCAACGGAGCTTCACAGCCACACAAATGGCCTCCTCTCTTTTCCGCCTTGTTGTCTCCACCATCTTTCTTGATTTTGATTTCCCTGAATCCTCAACCCTTATCCCTTCACCCACCCTTCTCTTTCCTTCTTCAATCCTCCACCTTTTACTTCCCTTTCTCTATCCCCTTCTTTCTCCGTTCTTATTCACTAAAACCCATTTTTCCTCTTCTTCCTCCTTTCCATCTCTCCGGCGCTACTGTTCTACTGGCGGTTTAATTTCATGGGTTTCTTGATCTTGGAGTAGGAAACAGGGAAGTGGGGTTTCTGCGAATCTATTCAAAATCTTAGTTGTTGTTCAGAGGGAGAAGATGAAAATTCAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCCAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTTTCCACCAAGCTACCTAAATGCGATATATGCCAAGACAAGGCAGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATCCATTCAAGTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGCTGCACGAAGGAAGTTGACAAGGTCAAGATGGAACCTCCAAATCCAAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCTAACTTCACGTCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCGGACAAGCAGAAGGAACAACTAGAGTTTGGGGAATTAGAATGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCAGCTGCTGAAGTTCCTGAGCTTCCTACATCATACTCAGGTAATGCAATTGCCTGCAGACCGACGAAGTCAAGCACATCATACAAAAAGCCTAGGCTTGAGATGGTTGACGACGAAGAGTTTTTTACGGTTCCTGATCTTGGATGAACAGAAGAGAGTGGCATTGATGTTGAGTTGCTAGGGTTATTGATCAGGATGGGACTCTAAAGACAGAGATAAAAGAGAGAAATTTTACAAATGTGACTTTTGTCATTAGTTTACTAAATTGTGGGATGTTGAAACACCATTTCATTTTATTAATGCTCACTTTGTATTTTTATTATTTGATTAATTGTACCAATTTGATTTTTAAACCTTTATAAATTGTAAGTACATAAATACACCATTTTCTAGATTTTGTTCTACTGTTTTTTGGAACTTATAATTTATATACCTTAAACTCCTAAA ATGAAAATTCAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCCAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTTTCCACCAAGCTACCTAAATGCGATATATGCCAAGACAAGGCAGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATCCATTCAAGTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGCTGCACGAAGGAAGTTGACAAGGTCAAGATGGAACCTCCAAATCCAAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCTAACTTCACGTCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCGGACAAGCAGAAGGAACAACTAGAGTTTGGGGAATTAGAATGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCAGCTGCTGAAGTTCCTGAGCTTCCTACATCATACTCAGGTAATGCAATTGCCTGCAGACCGACGAAGTCAAGCACATCATACAAAAAGCCTAGGCTTGAGATGGTTGACGACGAAGAGTTTTTTACGGTTCCTGATCTTGGATGA MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSTKLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSSGSLSANHQRFLATGIRVAMSSSCTKEVDKVKMEPPNPKNPQVPAKVPSQQVPNFTSSWAVDDFLHFSDLESSDKQKEQLEFGELEWLAEMGLFGEQVPQEALAAAEVPELPTSYSGNAIACRPTKSSTSYKKPRLEMVDDEEFFTVPDLG
BLAST of CsGy6G006410 vs. NCBI nr
Match: KGN46304.1 (hypothetical protein Csa_6G081450 [Cucumis sativus]) HSP 1 Score: 479.2 bits (1232), Expect = 8.2e-132 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. NCBI nr
Match: NP_001295820.1 (B-box zinc finger protein 24-like [Cucumis sativus] >ACA24496.1 putative transcription factor [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 3.1e-131 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CsGy6G006410 vs. NCBI nr
Match: XP_008460037.1 (PREDICTED: B-box zinc finger protein 24-like isoform X1 [Cucumis melo] >XP_008460038.1 PREDICTED: B-box zinc finger protein 24-like isoform X1 [Cucumis melo] >ADN34088.1 salt-tolerance protein [Cucumis melo subsp. melo]) HSP 1 Score: 475.3 bits (1222), Expect = 1.2e-130 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. NCBI nr
Match: XP_011656726.1 (PREDICTED: B-box zinc finger protein 24-like isoform X2 [Cucumis sativus]) HSP 1 Score: 472.6 bits (1215), Expect = 7.7e-130 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CsGy6G006410 vs. NCBI nr
Match: XP_008460039.1 (PREDICTED: B-box zinc finger protein 24-like isoform X2 [Cucumis melo]) HSP 1 Score: 468.8 bits (1205), Expect = 1.1e-128 Identity = 233/237 (98.31%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CsGy6G006410 vs. TAIR10
Match: AT1G06040.1 (B-box zinc finger family protein) HSP 1 Score: 295.0 bits (754), Expect = 4.0e-80 Identity = 156/248 (62.90%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of CsGy6G006410 vs. TAIR10
Match: AT2G31380.1 (salt tolerance homologue) HSP 1 Score: 292.7 bits (748), Expect = 2.0e-79 Identity = 158/241 (65.56%), Postives = 183/241 (75.93%), Query Frame = 0
BLAST of CsGy6G006410 vs. TAIR10
Match: AT1G78600.2 (light-regulated zinc finger protein 1) HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33 Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. TAIR10
Match: AT1G75540.1 (salt tolerance homolog2) HSP 1 Score: 125.9 bits (315), Expect = 3.2e-29 Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 0
BLAST of CsGy6G006410 vs. TAIR10
Match: AT4G10240.1 (B-box zinc finger family protein) HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of CsGy6G006410 vs. Swiss-Prot
Match: sp|Q96288|BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 7.2e-79 Identity = 156/248 (62.90%), Postives = 190/248 (76.61%), Query Frame = 0
BLAST of CsGy6G006410 vs. Swiss-Prot
Match: sp|Q9SID1|BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 292.7 bits (748), Expect = 3.6e-78 Identity = 158/241 (65.56%), Postives = 183/241 (75.93%), Query Frame = 0
BLAST of CsGy6G006410 vs. Swiss-Prot
Match: sp|Q9SYM2|BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 139.8 bits (351), Expect = 3.9e-32 Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. Swiss-Prot
Match: sp|Q9LQZ7|BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.8e-28 Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 0
BLAST of CsGy6G006410 vs. Swiss-Prot
Match: sp|O82617|BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of CsGy6G006410 vs. TrEMBL
Match: tr|A0A0A0KBS9|A0A0A0KBS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081450 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 5.5e-132 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. TrEMBL
Match: tr|B3TLK3|B3TLK3_CUCSA (Putative transcription factor OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 2.1e-131 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CsGy6G006410 vs. TrEMBL
Match: tr|A0A1S3CBP7|A0A1S3CBP7_CUCME (B-box zinc finger protein 24-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498974 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 7.9e-131 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. TrEMBL
Match: tr|E5GC89|E5GC89_CUCME (Salt-tolerance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 7.9e-131 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy6G006410 vs. TrEMBL
Match: tr|A0A1S3CC25|A0A1S3CC25_CUCME (B-box zinc finger protein 24-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498974 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 7.4e-129 Identity = 233/237 (98.31%), Postives = 236/237 (99.58%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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