CmaCh17G006070 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCATTGCCTAATCTCTTAGCCTTCCAAAGTCCTCAGCCACAAACCAATCAAGCTCCACAGCCACACAAATGGCCTCCACTCTTTTCCGCCTTCTTGTCTTCACCACCTTTCTTCATCTTCATTTCCCCAAATCTCTGCCCTTCCTCTTTCCTCTTCAATCCTCCACCATATACTTCCTCTTTCTCTATCCCCTTCCTTCCCGATTTTTCTCCTCTAACACCCTCTTTACCTTCTTCTTGGATTTATCCGGCGGCAGTGTTTTACCGGCACTGTGGCGCTTTGAGTTGCTGCTTTTCCTCCGAATTTCGTGGAGTTGATGATCTCGGAGTAGGAAACGGGAGAAGAGGGATTTCCGGGAATCTATTCTAGATCGCGGTGGTAATCTGGAGTGTGAAGATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGTAAACACCAGAGGCTTCTCCTTCAGTGCCTCTCCACCAAGCTCCCCAAATGCGACATATGCCAAGTAATTTCGATCTTTTGATGCTGTACTTTTGATTTATTGCTCGTTTATTTGCTAGTTTCGTTCATCTCATGGTGTTTGGTATGATATAATGAGTGTAGATTAGCGATTTCGAGAGCGTCGATGAGTATCTCAATAGCATTTACTTAAATCACTACTAAATCCGAAGGTTTAAGTTTATTTGTGAGTTTGAAATTTAGAAAGAGCCTCAACAAGTGAAAGAAGTTTGAACACAGGATCTTCAGTCTTTACTTCAATTTTAGTAATAGGGATTTGGATTTAGAATCTTTGATACCGATGACATCTTAATTTATCTCTATACTAAAAGATTTAAGCTTATAAGTTATGGCAAATTTTTTCCTTAACATATGACATGATATGATATCAATTCAAATCTAGTCGTTTTATTGCGTGGTTGCTGTTCCCTAGAGAATCATTTCCTCTGGTATCTGATCAATTAACTCTCCTGGATTGCCAGTTGATGCTAATGAGATTGATTTTTGAACGGCTTCAAGATCCAGAATTGGTATTTGTTTTGAATAACCAAGAAAATCAAATAAGTAATCATACTTTGTTCTTATGATACTTTGATTGTTATAAATTATCATTGTTTGTTAGATTCAAATAGTTTAATTGTAGTGAGTCGGTATTGAAATATTCAAATTTTGCTCGAGGGATGTCATTCGGTATGCTGAGTATTCTATATCTCATTCGGTGTCAGGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTATTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCTATGAGCTCAAGTTGCATGAAGGACGTCGACAAGGTGAAGATGGAACCTCCGAACCCGAAGAACCCCCAGGTTCCTGCTAAAATGTCTCCCCAGCAAGTTCCTAACTTCACATCCCCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTCGAGTCCTCTGACAAGGTAAAGAAAAGCTAGATACTTCACCTTCTACGCATCCATTTGTATGTTTTTTTGTTGATCATAGTGCAACAAAGGAAGTGAGCTTTTTGTTCTACTTTTCATGAAAAATAGTGGAGATGAAGTGAAAAGTAGTTTATACCCACATCTCCTGTTTAATTAATTCTACATATTTAAAAACCATAACTTTTTGAACCTTCCTGCATATGTTCAGAGGTACTCTGGCATTTTCTCCCAAAGATGAAACTAGTTTAGCACAAAGTTTCTAAAACATCTAATCATCTGTAACGGCCAAAGCCATTGCTAGCAGATATTGTCTTCTTTAGGCTTTCTCTTTCAAGCTTCCTTCAAGTTTTTAAAATTCCTCTACTAATGAGAGGTTTCACATCTCTACAAAGAATGTTTTGTTCTCCTCCCCAAACTAGATGTGGGATCTTTCAATCCACCCCCTTCGGGACTCAGTGTCCTCGTTGATACTCGTTCCATTCTCCAATCGATGTGGGACCCCAATCCACCCCCTTTGGGGCTCAACTTTCTTGCTGTCACATCGCCTTATGTCTGACTCTGATACCATTTGTAATGGTCGAAGCCCATTACTAGCCGATATTGTCTTTTATGGGCTTCCCCTCAAGGTTTTTAAAACGCATATGTTAGGGAGAGGTTTTTACACCCTCATAAAAAAATGTTTCGTTCGGATCTCACAACATCGGTTAGTTCATATCGTACACCGTTTTCCAAAATTTGGTTACTCTGATGCAAAACTGAATTTCCAATGGGAAGCGGAATCTCCAAAACAATAATAGAACATTGGCTGGCTTTAGTTTGGATCCATGCCTGTAGTTTCTTTAGAGATTTCTGTTCCTTACTCTGTTTCTAACACAGAGGCAAACTTTTCACGAAGAATTGTGTAATCATGATTATTGGGTTGTCACACTTATCCCCAAGTTTCATTACCGCAGCAGAAAGAACAACTAGAGTTTGGGGAGTTAGAATGGCTAGCAGAAATGGGACTCTTTGGCGAGCAGGTTCCTGAAGAAGCTTTAGCTGCTGCTGAAGTTCCCGAGCTTCCTACTTCGCACGCAGGTAGTGCATTCACATGCAGACCGACAAAGTCGAGCACGTCATACAAAAAGCCGAGGATCGAGATGGTAGACGATGAGGAGTTTTTTACAGTTCCTGATCTTGGATGAACGAAGAATGCACAGATGTTGAATTGGTATGCTTGTGAAAGATAGAGTTTATAATCTTACAAAATGTTTATGTATAGTATTGTCGCCATGGGCATGTGATAGTATGCGTTATAGTAGTTTGCTTTGATTTTGTACCTTATTATAACTTTTGGATCTTTTATGAAAAATATAAGATTATGATAAAGAATGGTGACTCGTGTTGTAAAGATTAAAGGGTTGTTTGGTTTGATATGTTTGAAATCATAATATTTGAGAATAAAATGCGTAG TAGCATTGCCTAATCTCTTAGCCTTCCAAAGTCCTCAGCCACAAACCAATCAAGCTCCACAGCCACACAAATGGCCTCCACTCTTTTCCGCCTTCTTGTCTTCACCACCTTTCTTCATCTTCATTTCCCCAAATCTCTGCCCTTCCTCTTTCCTCTTCAATCCTCCACCATATACTTCCTCTTTCTCTATCCCCTTCCTTCCCGATTTTTCTCCTCTAACACCCTCTTTACCTTCTTCTTGGATTTATCCGGCGGCAGTGTTTTACCGGCACTGTGGCGCTTTGAGTTGCTGCTTTTCCTCCGAATTTCGTGGAGTTGATGATCTCGGAGTAGGAAACGGGAGAAGAGGGATTTCCGGGAATCTATTCTAGATCGCGGTGGTAATCTGGAGTGTGAAGATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGTAAACACCAGAGGCTTCTCCTTCAGTGCCTCTCCACCAAGCTCCCCAAATGCGACATATGCCAAGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTATTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCTATGAGCTCAAGTTGCATGAAGGACGTCGACAAGGTGAAGATGGAACCTCCGAACCCGAAGAACCCCCAGGTTCCTGCTAAAATGTCTCCCCAGCAAGTTCCTAACTTCACATCCCCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTCGAGTCCTCTGACAAGCAGAAAGAACAACTAGAGTTTGGGGAGTTAGAATGGCTAGCAGAAATGGGACTCTTTGGCGAGCAGGTTCCTGAAGAAGCTTTAGCTGCTGCTGAAGTTCCCGAGCTTCCTACTTCGCACGCAGGTAGTGCATTCACATGCAGACCGACAAAGTCGAGCACGTCATACAAAAAGCCGAGGATCGAGATGGTAGACGATGAGGAGTTTTTTACAGTTCCTGATCTTGGATGAACGAAGAATGCACAGATGTTGAATTGGTATGCTTGTGAAAGATAGAGTTTATAATCTTACAAAATGTTTATGTATAGTATTGTCGCCATGGGCATGTGATAGTATGCGTTATAGTAGTTTGCTTTGATTTTGTACCTTATTATAACTTTTGGATCTTTTATGAAAAATATAAGATTATGATAAAGAATGGTGACTCGTGTTGTAAAGATTAAAGGGTTGTTTGGTTTGATATGTTTGAAATCATAATATTTGAGAATAAAATGCGTAG ATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGTAAACACCAGAGGCTTCTCCTTCAGTGCCTCTCCACCAAGCTCCCCAAATGCGACATATGCCAAGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTATTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCTATGAGCTCAAGTTGCATGAAGGACGTCGACAAGGTGAAGATGGAACCTCCGAACCCGAAGAACCCCCAGGTTCCTGCTAAAATGTCTCCCCAGCAAGTTCCTAACTTCACATCCCCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTCGAGTCCTCTGACAAGCAGAAAGAACAACTAGAGTTTGGGGAGTTAGAATGGCTAGCAGAAATGGGACTCTTTGGCGAGCAGGTTCCTGAAGAAGCTTTAGCTGCTGCTGAAGTTCCCGAGCTTCCTACTTCGCACGCAGGTAGTGCATTCACATGCAGACCGACAAAGTCGAGCACGTCATACAAAAAGCCGAGGATCGAGATGGTAGACGATGAGGAGTTTTTTACAGTTCCTGATCTTGGATGA MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSTKLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSTGSLSANHQRFLATGIRVAMSSSCMKDVDKVKMEPPNPKNPQVPAKMSPQQVPNFTSPWAVDDFLHFSDLESSDKQKEQLEFGELEWLAEMGLFGEQVPEEALAAAEVPELPTSHAGSAFTCRPTKSSTSYKKPRIEMVDDEEFFTVPDLG
BLAST of CmaCh17G006070 vs. Swiss-Prot
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 4.4e-81 Identity = 158/248 (63.71%), Postives = 190/248 (76.61%), Query Frame = 1
BLAST of CmaCh17G006070 vs. Swiss-Prot
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2) HSP 1 Score: 290.4 bits (742), Expect = 1.7e-77 Identity = 157/242 (64.88%), Postives = 182/242 (75.21%), Query Frame = 1
BLAST of CmaCh17G006070 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31 Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of CmaCh17G006070 vs. Swiss-Prot
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.3e-28 Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 1
BLAST of CmaCh17G006070 vs. Swiss-Prot
Match: BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana GN=BBX23 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TrEMBL
Match: E5GC89_CUCME (Salt-tolerance protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 8.3e-127 Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TrEMBL
Match: A0A0A0KBS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081450 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125 Identity = 223/237 (94.09%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TrEMBL
Match: B3TLK3_CUCSA (Putative transcription factor OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 7.8e-125 Identity = 222/237 (93.67%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TrEMBL
Match: A0A061EJL3_THECC (COL domain class transcription factor isoform 2 OS=Theobroma cacao GN=TCM_020013 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.5e-99 Identity = 184/239 (76.99%), Postives = 203/239 (84.94%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TrEMBL
Match: A0A061EKC2_THECC (COL domain class transcription factor isoform 1 OS=Theobroma cacao GN=TCM_020013 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.4e-97 Identity = 183/239 (76.57%), Postives = 202/239 (84.52%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TAIR10
Match: AT1G06040.1 (AT1G06040.1 B-box zinc finger family protein) HSP 1 Score: 302.4 bits (773), Expect = 2.5e-82 Identity = 158/248 (63.71%), Postives = 190/248 (76.61%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TAIR10
Match: AT2G31380.1 (AT2G31380.1 salt tolerance homologue) HSP 1 Score: 290.4 bits (742), Expect = 9.8e-79 Identity = 157/242 (64.88%), Postives = 182/242 (75.21%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1) HSP 1 Score: 137.9 bits (346), Expect = 8.2e-33 Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TAIR10
Match: AT1G75540.1 (AT1G75540.1 salt tolerance homolog2) HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29 Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 1
BLAST of CmaCh17G006070 vs. TAIR10
Match: AT4G10240.1 (AT4G10240.1 B-box zinc finger family protein) HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of CmaCh17G006070 vs. NCBI nr
Match: gi|659120145|ref|XP_008460037.1| (PREDICTED: salt tolerance protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 461.1 bits (1185), Expect = 1.2e-126 Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of CmaCh17G006070 vs. NCBI nr
Match: gi|700191100|gb|KGN46304.1| (hypothetical protein Csa_6G081450 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 2.9e-125 Identity = 223/237 (94.09%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of CmaCh17G006070 vs. NCBI nr
Match: gi|821595467|ref|NP_001295820.1| (B-box zinc finger protein 24-like [Cucumis sativus]) HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124 Identity = 222/237 (93.67%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of CmaCh17G006070 vs. NCBI nr
Match: gi|659120149|ref|XP_008460039.1| (PREDICTED: salt tolerance protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124 Identity = 225/237 (94.94%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of CmaCh17G006070 vs. NCBI nr
Match: gi|778711409|ref|XP_011656726.1| (PREDICTED: B-box zinc finger protein 24-like isoform X2 [Cucumis sativus]) HSP 1 Score: 449.9 bits (1156), Expect = 2.8e-123 Identity = 222/237 (93.67%), Postives = 230/237 (97.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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