Cp4.1LG17g10890 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAAAATTCCTCAGCCACAAACCAATCCACCTCCACAGCCACACAAATGGCGTCCACCCTTTTCCGCCTCGTTGTCTCTTCCACCTTTCTTGCTTTCCATGTCCAAAAATCTAAACCCTTATCGTCTCACCCACCATTTACTCCCCCTTCCTTCTACCCCTTCTCTTCTACCTTTTTCTCCACTAACAATCGGTTTCCGTTCTTCTTCTGTTCGATCTTTTCCGGTCGGAGTTGCTGTTTTTCTCTCAAAATTTCATGGATTTGATGGTCTCGGAGTAGAAAAAAGGGCGGAGGTGGAATTTCCGGGAATCAGTTGACGATCGTAGTGGTAACCTAGAGGGATAAGATGAAAATTCAGTGCGATGTTTGTGAGAAAGCTCCTGCTACTTTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGCAAACACCAGAGGCTTCTTCTTCAGTGCCTCTCTACTAAGCTTCCCAAATGCGACATATGCCAAGTAATTGCGATCTCTGTTGCTTCACTTTGGTTTCTTGCTTGTTCATTTGCTCATGTCGTTGATCTGATCGTTTTTCTTCTGATATGATGAATTTAGATGAAAGATTTTTAAGTGTGGATGATAATCTCAACAAAGTTTAACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTTACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTTACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTTACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTTACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTTACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTCACTTAAATCACTGTTTAATCCGAAGTGATTTTGCAACTGTGGATGATAATCTCAACAAAGTTCACTTAAATCACTGTTTAATCCGAAGTTACATTCAAGTTTATTAGGTTCTAGTAAACCTAACCCTTTCATGTGTACTCTGATCACTCTCTATCACTCGTGAGCTTCGAAGTTAGTAAGAAGTTTGAACCCAGGACCTTCAGTTTTTACTTCAATCATCCGTTTTTGGGTGTAGTAGTTAGGATTCGAATTTAGATTCAGTTGATACCATGGTTATTTATCTCTATCCCAAAAGATTTAAGCTTATAAGTTATGTTGAATTTGATATTTTGATTACATATTATGAACACATGATATCATATCAACACAAGTCTAATTATTTTACTACTTGTTTGCTGTTGGGTAGAGCACACATGATAGCATGAAAGATTGTGTAACCACCCGAGTCCACTACTAGCAGATATTGTCCTTTTTGAGCTTTCCCTTTTGGGTTTCCCTCAAGGTTTTTAAAACGTGTTTGCTTAGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCCCCAACTGATGTGGGATCTCCCATTTTGAAACGGCTGCAAAATCCAGAATTGGTATTTGTTTTGATATACTATGTTCGTATGGTCTGTGTTTTCCTTTTTAGTTGTGAAGTTCAGACATGAAATCATATAAGAAGTTCTTGCAGCATGATTTGATGTTGAAGTATGCATTAAGGCCTCGAATTTATGTAATCGACGAATATTTGGATAAAAACATGCAAAGATATAGCTGGTGTTAAGTAAGTTATAAACCATCATCGTTCGTTAGATTCAAATAAGATAATCGACGAGAGTCGGCATTGAAAAATTCATGTTTACCTTGAAGGATGTTCATTTTTGTGGTAGAAAAGTAGGAAGCAGTTTAGTTGAGATGAGAAATGCTGAGTATTGTATATCTCATATGGTATCAGGACAAGCCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTTTTTTGTCAAGATTGTGATGAACCAATTCATTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTTCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGCACGAAGGACGTCGACAAGGTCAAAATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAATGCCTTCACAACAAGTTCCTAACTTCACATCCCCATGGGCGGTTGACGACTTTCTCCACTTCTCCGATCTCGAGTCGTCTGACAAGGTTAGTAAGCTAGATGCTACACCTTCTACACATCCACTTATTTGCCTTTTGTGATCATACTTCAACACTGTAATTCGTGCCAGTTTAGAAAGCATAAGTTTTTGAACGTTTACTTTCCTGCATCGACACATCTTTTCTTTCTCCTCCGAAAGATCACGCACACACTTATTTCAATTGAAGCGTCTGGACTAACTAGCACACGTTTTGACTATCCTCACAGGACAACCTACAACATTTGGTTGTTAAGGAAACCCGCAGGATATTGAATCATAAGTAGGAGTCTTTTATTATTTACACGACCCTTATTAACCACAGGGCCGAGCTATGGCTGTTCATTAAATCCATACCCTGCAGTGTCGTATGGGAGTTATGATGCACGTCGGATTGGATTGTTTTCTTTCCAGATTTCTGGTGTTTACTGTTGCTAACATAGAGGCAAACATGTGACAAAGAATTGCATTACTATTACTTGATGCATAACTTACGATCAAATCCATTGTGCAGCAGAAAGAAGATCTAGAGTTTGGAGAACTAGAATGGCTAGCAGAAATGGGGCTGTTTGGGGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGTAATGCACTCACATACAGGCCGACGAAGTCGAGCATGTCGTACAAAAAGCCTAGGATCGAGGTGGTAGACGAGGATGAGTTTTTTACCGTTCCCGATCTCGGATGAACAGGAAGGGACAAGTTAGTATGGTTATGAATAATAATAATACAGTTTAGTTATAGGGTTGAATAATGATTATATTATGTGGTAGTATTGTTCACATCTATGGTTTGGGTAGTATGCATTTGATCTTATGCCTACAATATTTGTTTTTTACTTTTGCTTTTCTACCTTATTGTAACTTTTGGATCTTATATGACAAATTTAAGATTATTTTAAAGAATGGTAACTCATCCTTGTCCAAAAAATTTAAGATTATTTAAGTTTA CTCAAAATTCCTCAGCCACAAACCAATCCACCTCCACAGCCACACAAATGGCGTCCACCCTTTTCCGCCTCGTTGTCTCTTCCACCTTTCTTGCTTTCCATGTCCAAAAATCTAAACCCTTATCGTCTCACCCACCATTTACTCCCCCTTCCTTCTACCCCTTCTCTTCTACCTTTTTCTCCACTAACAATCGGTTTCCGTTCTTCTTCTGTTCGATCTTTTCCGGTCGGAGTTGCTGTTTTTCTCTCAAAATTTCATGGATTTGATGGTCTCGGAGTAGAAAAAAGGGCGGAGAGGGATAAGATGAAAATTCAGTGCGATGTTTGTGAGAAAGCTCCTGCTACTTTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGCAAACACCAGAGGCTTCTTCTTCAGTGCCTCTCTACTAAGCTTCCCAAATGCGACATATGCCAAGACAAGCCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTTTTTTGTCAAGATTGTGATGAACCAATTCATTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTTCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGCACGAAGGACGTCGACAAGGTCAAAATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAATGCCTTCACAACAAGTTCCTAACTTCACATCCCCATGGGCGGTTGACGACTTTCTCCACTTCTCCGATCTCGAGTCGTCTGACAAGCAGAAAGAAGATCTAGAGTTTGGAGAACTAGAATGGCTAGCAGAAATGGGGCTGTTTGGGGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGTAATGCACTCACATACAGGCCGACGAAGTCGAGCATGTCGTACAAAAAGCCTAGGATCGAGGTGGTAGACGAGGATGAGTTTTTTACCGTTCCCGATCTCGGATGAACAGGAAGGGACAAGTTAGTATGGTTATGAATAATAATAATACAGTTTAGTTATAGGGTTGAATAATGATTATATTATGTGGTAGTATTGTTCACATCTATGGTTTGGGTAGTATGCATTTGATCTTATGCCTACAATATTTGTTTTTTACTTTTGCTTTTCTACCTTATTGTAACTTTTGGATCTTATATGACAAATTTAAGATTATTTTAAAGAATGGTAACTCATCCTTGTCCAAAAAATTTAAGATTATTTAAGTTTA CTCAAAATTCCTCAGCCACAAACCAATCCACCTCCACAGCCACACAAATGGCGTCCACCCTTTTCCGCCTCGTTGTCTCTTCCACCTTTCTTGCTTTCCATGTCCAAAAATCTAAACCCTTATCGTCTCACCCACCATTTACTCCCCCTTCCTTCTACCCCTTCTCTTCTACCTTTTTCTCCACTAACAATCGGTTTCCGTTCTTCTTCTGTTCGATCTTTTCCGGTCGGAGTTGCTGTTTTTCTCTCAAAATTTCATGGATTTGATGGTCTCGGAGTAGAAAAAAGGGCGGAGAGGGATAAGATGAAAATTCAGTGCGATGTTTGTGAGAAAGCTCCTGCTACTTTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGCGATGTTGAAGTTCATGCTGCTAATAAGCTTGCGAGCAAACACCAGAGGCTTCTTCTTCAGTGCCTCTCTACTAAGCTTCCCAAATGCGACATATGCCAAGACAAGCCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTTTTTTGTCAAGATTGTGATGAACCAATTCATTCAACTGGTAGTCTTTCAGCAAACCACCAGAGGTTTCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGCACGAAGGACGTCGACAAGGTCAAAATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAATGCCTTCACAACAAGTTCCTAACTTCACATCCCCATGGGCGGTTGACGACTTTCTCCACTTCTCCGATCTCGAGTCGTCTGACAAGCAGAAAGAAGATCTAGAGTTTGGAGAACTAGAATGGCTAGCAGAAATGGGGCTGTTTGGGGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGTAATGCACTCACATACAGGCCGACGAAGTCGAGCATGTCGTACAAAAAGCCTAGGATCGAGGTGGTAGACGAGGATGAGTTTTTTACCGTTCCCGATCTCGGATGA LKIPQPQTNPPPQPHKWRPPFSASLSLPPFLLSMSKNLNPYRLTHHLLPLPSTPSLLPFSPLTIGFRSSSVRSFPVGVAVFLSKFHGFDGLGVEKRAERDKMKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSTKLPKCDICQDKPAFIFCVEDRALFCQDCDEPIHSTGSLSANHQRFLATGIRVAMSSSCTKDVDKVKMEPPNPKNPQVPAKMPSQQVPNFTSPWAVDDFLHFSDLESSDKQKEDLEFGELEWLAEMGLFGEQVPQEALAAAEVPELPTSHSGNALTYRPTKSSMSYKKPRIEVVDEDEFFTVPDLG
BLAST of Cp4.1LG17g10890 vs. Swiss-Prot
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 4.4e-82 Identity = 157/248 (63.31%), Postives = 193/248 (77.82%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. Swiss-Prot
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 4.5e-79 Identity = 160/242 (66.12%), Postives = 185/242 (76.45%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32 Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. Swiss-Prot
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.1e-28 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. Swiss-Prot
Match: BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana GN=BBX23 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27 Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TrEMBL
Match: E5GC89_CUCME (Salt-tolerance protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 2.6e-126 Identity = 224/237 (94.51%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TrEMBL
Match: A0A0A0KBS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081450 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.5e-125 Identity = 221/237 (93.25%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TrEMBL
Match: B3TLK3_CUCSA (Putative transcription factor OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.5e-124 Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TrEMBL
Match: A0A061EJL3_THECC (COL domain class transcription factor isoform 2 OS=Theobroma cacao GN=TCM_020013 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.9e-100 Identity = 185/239 (77.41%), Postives = 202/239 (84.52%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TrEMBL
Match: A0A0S3SDC5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G212900 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 7.3e-100 Identity = 184/240 (76.67%), Postives = 204/240 (85.00%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TAIR10
Match: AT1G06040.1 (AT1G06040.1 B-box zinc finger family protein) HSP 1 Score: 306.2 bits (783), Expect = 2.5e-83 Identity = 157/248 (63.31%), Postives = 193/248 (77.82%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TAIR10
Match: AT2G31380.1 (AT2G31380.1 salt tolerance homologue) HSP 1 Score: 296.2 bits (757), Expect = 2.6e-80 Identity = 160/242 (66.12%), Postives = 185/242 (76.45%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-33 Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TAIR10
Match: AT1G75540.1 (AT1G75540.1 salt tolerance homolog2) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. TAIR10
Match: AT4G10240.1 (AT4G10240.1 B-box zinc finger family protein) HSP 1 Score: 125.2 bits (313), Expect = 7.8e-29 Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. NCBI nr
Match: gi|659120145|ref|XP_008460037.1| (PREDICTED: salt tolerance protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 459.9 bits (1182), Expect = 3.8e-126 Identity = 224/237 (94.51%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. NCBI nr
Match: gi|700191100|gb|KGN46304.1| (hypothetical protein Csa_6G081450 [Cucumis sativus]) HSP 1 Score: 455.3 bits (1170), Expect = 9.3e-125 Identity = 221/237 (93.25%), Postives = 231/237 (97.47%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. NCBI nr
Match: gi|821595467|ref|NP_001295820.1| (B-box zinc finger protein 24-like [Cucumis sativus]) HSP 1 Score: 453.4 bits (1165), Expect = 3.6e-124 Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. NCBI nr
Match: gi|659120149|ref|XP_008460039.1| (PREDICTED: salt tolerance protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 453.4 bits (1165), Expect = 3.6e-124 Identity = 223/237 (94.09%), Postives = 230/237 (97.05%), Query Frame = 1
BLAST of Cp4.1LG17g10890 vs. NCBI nr
Match: gi|778711409|ref|XP_011656726.1| (PREDICTED: B-box zinc finger protein 24-like isoform X2 [Cucumis sativus]) HSP 1 Score: 448.7 bits (1153), Expect = 8.7e-123 Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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