CsGy5G029370 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G029370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	cyclin-B1-2
Location	Chr5 : 32721915 .. 32725098 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGTTAGGAGAGGCAAAGCAATCGGTCGCTACTTGGAGAAGAAGTTTTCTTGAGAGAGAGGAAGAAAAAGAAAATGGAGTCTTCGAAGGCTATTCCCCATGAAATCGGAGGGATCCAGAACGATGCCCTTCGATTTGGACTTCAAGGCGTGAAGAGCGATCTTGTCGGATCTCATCCCGTTGAATCCCTTTATGAAACTGTAATTTTCTCCTCTCAATCTGTCTCAGTTTTTTTTTCTTTCTAAGTTGCTCTATTTCGTTTTCATATAGATTCGTCTGTTTTAGTAATTGCAATTAGGAAGGGATTGTTGTTGGGAATAGAATCTGGGTTCGATGAAGTTAATTGCACTAGAAACTTGTAGCTTGATGTTTTGGAAATTTGTTGTGGTCTGTTTTTATAAATTATTGTGAAATGATAGTGGGAATTTCATCTCTTGGTACTGAAATATGAATGATAGAGTGATTTATCTTGTGTGGTATTGGATAAAACCTTCCAAGTAGCTCGCATTAACATTTTTTAGTGAAGGAAACTGGGGCAAGTAGATTGGCAAATGAAGGAAAGGATCGAGCTAAGAGCACCCATGATATTTTAGGCAAATCTCGGAAACCACCCTTGGTATAATTACCCTTAAATTTTCCATGGTAAAAATTGAGCAATTAAAGTTATAAAAATGTTAAAATAAACTTTCAAACTTTCAATTGTTATAGAATCAATCTTAATACTTGTTTAAGTTCAAGGGCTCAGTTTTTACCAAAGTTTAGGGGGTTTGCAATTTGCCCTAATTTTTTATTCTACCAGAACTTTAGGTAGTAGCCACTGAGAATGACATGTGGTGAACCTGTTAGCACACTGAAAGCCCTGGAGGAGGGGGAGGGGGCTGGCTTTCAATTTGAAAAGGCCTCTATTGGCTTGATTACAGGGTCTGGAATGCTTCTTGCCTTTATTATTCTGCTAATAGGATTCTTTCTTACCGAAATGCAATATGTTCCTTTCAATGCTTAAGGATGTAAAAACAAAAATTCTTTTAATTTGATTCATGTATATCCCTATCTTTTTTTTTCTTGATATAGACAAGAAGAACACAAGAGGAAATGAAAAGGAAAGTTCTTGTGAATACATATGGTTCTGCATTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTAGGTATGGCAGTTCTTGTATAGATGCTGTATCTCTCTTGGCGTGTTCTAAATTGGAGAACTTTTTTAAAAGCTATAATGCATCAAAATCTACAGTTTTGTTATGAATTATTTGATTTTTAACTATTATGACTTTTGTGGTTATTGTTCTATAATGTCTCGGTTGTTGGAGGAAAAACAGCTAGACTTCTTCACTAACTCTTACAACTCATGTAGCACTTTTTCCTCATTCCACGATATGCTAGTGCCATGATAATAGGATGTCTGTTGTAGAATTGATGTTTTATGTGCATGAATTACATTGGGATGCTCAAATCTGACCTCTACTTTTCACCAGCATTTCAACGTGTTATAACCGAGTGAAGCTAATTTAAGCTGTTTGTCTAGTTGGAACTTGAAAGTCATTTCTAAGCTAAGTTTCAATTCTAACTCAATGCTGTTGCAGATTTCAAAGGCCTCCTGGGCCAATTCCATCTTCAATGCTGGGATTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTGAATGGTAAGATGAGAATTTATGAAATCTCCTAGATCAATATAACTCAACTGATTCTTATCTCTATATCCCTTTGCATTATAAGGGGTTTTTTCCCCATTAACTTAAATATTTCTTTAGGACTCTTATTAAATGATCTGACTTTGGTGGGATAACTATTACATGAACTATGGTTGTATATGATAATCCCAAGTCACCCGAGTGTATTCATGGATGAGGTAAAGAAAGAAGCAAGAGGGTGGGAATGGATGGTTGGGTGTGTCGTGTGTGAGCTGTGCTTTTGTGGTGCCCATGTGATCAGGGTAGTTTTGCTTTTTTGTGTAGTTAGTGTTTGTCTGTGTAGTGGGTAGAAAGGTTGTTAAGACCCTTTATGACAGGTTAAGGATATCTTCTTCTTCTTCTTCTCTCTTTCTCTCTCTCTTTTTTTTTTTTTTTTCTATTTCGCCAAATTGTAGCTCTTGTTGAAACAATGTGGAGAGGGGGAACTCTGGAAACTCTCTTTGGCTTTGTCAAAATAGTAAATACATAATATAAGCTCTGTAAGGAATTAATTTAGTTTTAAAAAATGGTATTCAAGGATCAATTACTTCACCTTCACAAAACATTTGTTTATCCCCTATTCCTCGAATATTTCTGACCTGTGTACTAAAGTTTTGAAGAACTCAGATGAGGGATGAGAAGGAGCTTATTCTCAGTTTTACGGTCATTTTTGTAGTTTTCATCTTCCACAGGAGTTTGTTTCCTCTAAACATTGATTCCAATACCTAATATACATATAATTCTAAAATCTTTCTAGGCTGTTTTCAAGAACGAGAGGGATGAATTACTTTGGCCAAATTTTTCTTTCACTCAACATAATGAATCTCCATTGTAGTCCATCCTGATGGTTAAAAGAACACTCATCTTAGATAAACAACTTCTGTTAGTGTTAATTTACAACTCATGACGTTACTTGAACGGGATCTGTTGCATAGATTGTATAATTATTTACAACTTGTTTTACATGACTTCGCAGACCCAAGGGAATCTGAATCATTGAGGCCATTGGATATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGTCCAAGTTTCATGTAATCTAATCTTAAGAGGATCCCATCAAACACCACAATTTCATTATGGGTTCTCAGTTTACCCATAATTTTGTTGACCTCTGTTTGTTTGTTGGTCAGGACATCTTGAGTTGAACTCTCTTAGCTTCATTAGTCAACATCTTTATCTGATTTCTTATAAATTCGTCAAACTTTACCTTTTGCCCAAGTGGGTGTTGTGTTAGATTATCGATTGACATAAAAGCTTTAAAATTAACCGGTCAAGGTAAAATCTATTGTTATATTGTTTAATACTTTCTCACTTTTGGAGTTGAAATACTTAAAATGAGTAGAAACTAATATTAACTAGTAAGTAAATAAAATGTGGTTTTGTTAAATCATCGTTAAT

mRNA sequence

ACAGTTAGGAGAGGCAAAGCAATCGGTCGCTACTTGGAGAAGAAGTTTTCTTGAGAGAGAGGAAGAAAAAGAAAATGGAGTCTTCGAAGGCTATTCCCCATGAAATCGGAGGGATCCAGAACGATGCCCTTCGATTTGGACTTCAAGGCGTGAAGAGCGATCTTGTCGGATCTCATCCCGTTGAATCCCTTTATGAAACTACAAGAAGAACACAAGAGGAAATGAAAAGGAAAGTTCTTGTGAATACATATGGTTCTGCATTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTAGATTTCAAAGGCCTCCTGGGCCAATTCCATCTTCAATGCTGGGATTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTGAATGACCCAAGGGAATCTGAATCATTGAGGCCATTGGATATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGTCCAAGTTTCATGTAATCTAATCTTAAGAGGATCCCATCAAACACCACAATTTCATTATGGGTTCTCAGTTTACCCATAATTTTGTTGACCTCTGTTTGTTTGTTGGTCAGGACATCTTGAGTTGAACTCTCTTAGCTTCATTAGTCAACATCTTTATCTGATTTCTTATAAATTCGTCAAACTTTACCTTTTGCCCAAGTGGGTGTTGTGTTAGATTATCGATTGACATAAAAGCTTTAAAATTAACCGGTCAAGGTAAAATCTATTGTTATATTGTTTAATACTTTCTCACTTTTGGAGTTGAAATACTTAAAATGAGTAGAAACTAATATTAACTAGTAAGTAAATAAAATGTGGTTTTGTTAAATCATCGTTAAT

Coding sequence (CDS)

ATGGAGTCTTCGAAGGCTATTCCCCATGAAATCGGAGGGATCCAGAACGATGCCCTTCGATTTGGACTTCAAGGCGTGAAGAGCGATCTTGTCGGATCTCATCCCGTTGAATCCCTTTATGAAACTACAAGAAGAACACAAGAGGAAATGAAAAGGAAAGTTCTTGTGAATACATATGGTTCTGCATTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTAGATTTCAAAGGCCTCCTGGGCCAATTCCATCTTCAATGCTGGGATTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTGAATGACCCAAGGGAATCTGAATCATTGAGGCCATTGGATATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGTCCAAGTTTCATGTAA

Protein sequence

MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

Homology

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BLAST of CsGy5G029370 vs. NCBI nr
Match: XP_004141496.1 (PREDICTED: cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_5G643970 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 2.5e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of CsGy5G029370 vs. NCBI nr
Match: XP_008459455.1 (PREDICTED: cyclin-B1-2 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 7.2e-75
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRK+LVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of CsGy5G029370 vs. NCBI nr
Match: XP_022939098.1 (cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 3.0e-73
Identity = 135/141 (95.74%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

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BLAST of CsGy5G029370 vs. NCBI nr
Match: XP_022956483.1 (cyclin-B1-2-like [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

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BLAST of CsGy5G029370 vs. NCBI nr
Match: XP_022989933.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of CsGy5G029370 vs. TAIR10
Match: AT5G38650.1 (Proteasome maturation factor UMP1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-62
Identity = 108/141 (76.60%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MES K I HEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ +++QEEMKR+V+ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

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BLAST of CsGy5G029370 vs. TAIR10
Match: AT1G67250.1 (Proteasome maturation factor UMP1)

HSP 1 Score: 229.2 bits (583), Expect = 1.6e-60
Identity = 101/141 (71.63%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MES K I HEIGG++NDALRFGL GVKS+++GSHP+ES YE+ ++++E +KR V+ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD+DRQILSRFQRPPGPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLG+SKGP+ PSFM
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

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BLAST of CsGy5G029370 vs. TAIR10
Match: AT1G62920.1 (Proteasome maturation factor UMP1 (InterPro:IPR008012))

HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 62  AFPLKMDLDRQILSRF------------------------QRPPGPIPSSMLGLEALTGS 109
           A PLKMDLDR IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

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BLAST of CsGy5G029370 vs. Swiss-Prot
Match: sp|Q0DWQ7|CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGL-QGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ DLD QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

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BLAST of CsGy5G029370 vs. Swiss-Prot
Match: sp|Q55G18|POMP_DICDI (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-13
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 23  LQGVKSDLVG-SHPVESLYETTRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILSRFQRPP 82
           L+   S++ G SHPVES+     +T+ ++K   + N +G+   +  ++++QI S+F+R P
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP 73

Query: 83  GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  -TLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

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BLAST of CsGy5G029370 vs. Swiss-Prot
Match: sp|Q3SZV5|POMP_BOVIN (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +  Q++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

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BLAST of CsGy5G029370 vs. Swiss-Prot
Match: sp|Q9Y244|POMP_HUMAN (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +  Q++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

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BLAST of CsGy5G029370 vs. Swiss-Prot
Match: sp|Q9CQT5|POMP_MOUSE (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +  Q++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

[Close]

BLAST of CsGy5G029370 vs. TrEMBL
Match: tr|A0A0A0KUK6|A0A0A0KUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CsGy5G029370 vs. TrEMBL
Match: tr|A0A1S3CAQ6|A0A1S3CAQ6_CUCME (cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-75
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRK+LVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of CsGy5G029370 vs. TrEMBL
Match: tr|A0A2P5F6U8|A0A2P5F6U8_9ROSA (Proteasome maturation factor UMP OS=Trema orientalis OX=63057 GN=TorRG33x02_107890 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.1e-66
Identity = 121/141 (85.82%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           ME+ K I HEIGG+QNDALRFGL GVKSD+VGSHP+ES +++TRRTQEEMKRKVL NTYG
Sbjct: 1   MEAPKTIAHEIGGVQNDALRFGLNGVKSDIVGSHPLESAFQSTRRTQEEMKRKVLANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
            AFPLKMDLDRQILSRFQRPPG IPSSMLGLEA+TG+LDDFGFEDYLNDPRESE+ RPLD
Sbjct: 61  GAFPLKMDLDRQILSRFQRPPGTIPSSMLGLEAVTGTLDDFGFEDYLNDPRESETFRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

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BLAST of CsGy5G029370 vs. TrEMBL
Match: tr|A0A2P2KWT9|A0A2P2KWT9_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.6e-65
Identity = 118/141 (83.69%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           ME+ K I HEIGGIQNDALRFGL GVKSDL+ SHP+ES Y +TR+ +EEM+RK+L NTYG
Sbjct: 1   MEAPKTIAHEIGGIQNDALRFGLHGVKSDLLSSHPLESAYHSTRKNEEEMRRKILANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGP+PSSMLGLEALTGSLDDFGFEDYLNDPRESE+ RP D
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPVPSSMLGLEALTGSLDDFGFEDYLNDPRESETFRPAD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEV LGLSKGPVCPSF+
Sbjct: 121 MHHGMEVHLGLSKGPVCPSFI 141

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BLAST of CsGy5G029370 vs. TrEMBL
Match: tr|A0A2I4E7V8|A0A2I4E7V8_9ROSI (cyclin-B1-2-like OS=Juglans regia OX=51240 GN=LOC108987077 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60
           ME++K I HEIGGIQNDALRFGL GVKSD+VGSHP+ES Y++ R TQEEMKRK L+NTYG
Sbjct: 1   MEATKTIAHEIGGIQNDALRFGLHGVKSDIVGSHPLESAYQSARSTQEEMKRKFLMNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLK+DLD+QILSRFQRPPG IPSSMLGLEA+TG LDDFGFEDYLNDPR+SE+ RPLD
Sbjct: 61  SAFPLKLDLDKQILSRFQRPPGVIPSSMLGLEAVTGGLDDFGFEDYLNDPRDSETFRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

The following BLAST results are available for this feature:

BLAST of CsGy5G029370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141496.1	2.5e-75	100.00	PREDICTED: cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_5G...	[more]
XP_008459455.1	7.2e-75	98.58	PREDICTED: cyclin-B1-2 [Cucumis melo]	[more]
XP_022939098.1	3.0e-73	95.74	cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbit...	[more]
XP_022956483.1	5.2e-73	96.45	cyclin-B1-2-like [Cucurbita moschata]	[more]
XP_022989933.1	5.2e-73	96.45	cyclin-B1-2-like [Cucurbita maxima]	[more]

BLAST of CsGy5G029370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38650.1	1.7e-62	76.60	Proteasome maturation factor UMP1	[more]
AT1G67250.1	1.6e-60	71.63	Proteasome maturation factor UMP1	[more]
AT1G62920.1	7.5e-10	47.89	Proteasome maturation factor UMP1 (InterPro:IPR008012)	[more]

BLAST of CsGy5G029370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0DWQ7\|CCB12_ORYSJ	2.3e-24	53.04	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
sp\|Q55G18\|POMP_DICDI	4.1e-13	38.74	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
sp\|Q3SZV5\|POMP_BOVIN	1.2e-12	37.93	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
sp\|Q9Y244\|POMP_HUMAN	7.7e-12	37.07	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
sp\|Q9CQT5\|POMP_MOUSE	7.7e-12	37.07	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of CsGy5G029370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUK6\|A0A0A0KUK6_CUCSA	1.6e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
tr\|A0A1S3CAQ6\|A0A1S3CAQ6_CUCME	4.8e-75	98.58	cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1	[more]
tr\|A0A2P5F6U8\|A0A2P5F6U8_9ROSA	3.1e-66	85.82	Proteasome maturation factor UMP OS=Trema orientalis OX=63057 GN=TorRG33x02_1078...	[more]
tr\|A0A2P2KWT9\|A0A2P2KWT9_RHIMU	7.6e-65	83.69	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2I4E7V8\|A0A2I4E7V8_9ROSI	1.7e-64	83.69	cyclin-B1-2-like OS=Juglans regia OX=51240 GN=LOC108987077 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043248	proteasome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR008012	Ump1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G029370.1	CsGy5G029370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05348	UMP1	coord: 15..129 e-value: 6.7E-36 score: 123.0
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 9..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G029370	Cla016458	Watermelon (97103) v1	cgybwmB409
CsGy5G029370	Csa5G643970	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G029370	MELO3C022086	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G029370	ClCG11G005320	Watermelon (Charleston Gray)	cgybwcgB328
CsGy5G029370	CSPI05G29970	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G029370	CmaCh15G001910	Cucurbita maxima (Rimu)	cgybcmaB609
CsGy5G029370	CmaCh04G028440	Cucurbita maxima (Rimu)	cgybcmaB647
CsGy5G029370	CmoCh15G002050	Cucurbita moschata (Rifu)	cgybcmoB584
CsGy5G029370	CmoCh04G029730	Cucurbita moschata (Rifu)	cgybcmoB625
CsGy5G029370	Lsi03G002260	Bottle gourd (USVL1VR-Ls)	cgyblsiB325
CsGy5G029370	Cp4.1LG01g22160	Cucurbita pepo (Zucchini)	cgybcpeB625
CsGy5G029370	Cp4.1LG13g07830	Cucurbita pepo (Zucchini)	cgybcpeB598
CsGy5G029370	MELO3C022086.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G029370	CsaV3_5G039100	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G029370	Cla97C11G212240	Watermelon (97103) v2	cgybwmbB341
CsGy5G029370	Bhi06G000072	Wax gourd	cgybwgoB439
CsGy5G029370	Carg05920	Silver-seed gourd	carcgybB0021
CsGy5G029370	Carg02184	Silver-seed gourd	carcgybB0280

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G029370	Wax gourd	cgybwgoB499
CsGy5G029370	Cucurbita pepo (Zucchini)	cgybcpeB587
CsGy5G029370	Melon (DHL92) v3.5.1	cgybmeB297
CsGy5G029370	Melon (DHL92) v3.5.1	cgybmeB322
CsGy5G029370	Melon (DHL92) v3.6.1	cgybmedB327
CsGy5G029370	Watermelon (Charleston Gray)	cgybwcgB363
CsGy5G029370	Cucumber (Chinese Long) v3	cgybcucB237